RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 DEAF1O75398 565 aaPredicted RBP8.59□□□□□ -1.03
CHD9-215ENST00000565442 MAP3K6O95382 1288 aa8.59□□□□□ -1.03
CHD9-215ENST00000565442 SSTR4P31391 388 aa8.59□□□□□ -1.03
CHD9-215ENST00000565442 TXKP42681 527 aa8.59□□□□□ -1.03
CHD9-215ENST00000565442 DZIP1LQ8IYY4 767 aaKnown RBP8.59□□□□□ -1.03
CHD9-215ENST00000565442 TTC9Q92623 222 aa8.59□□□□□ -1.03
CHD9-215ENST00000565442 DMGDHQ9UI17 866 aaKnown RBP8.59□□□□□ -1.03
CHD9-215ENST00000565442 EPB42P16452 691 aa8.58□□□□□ -1.04
CHD9-215ENST00000565442 CD97P48960 835 aa8.58□□□□□ -1.04
CHD9-215ENST00000565442 RTN1Q16799 776 aa8.58□□□□□ -1.04
CHD9-215ENST00000565442 DHX32Q7L7V1 743 aaKnown RBP8.58□□□□□ -1.04
CHD9-215ENST00000565442 GAS2L2Q8NHY3 880 aa8.58□□□□□ -1.04
CHD9-215ENST00000565442 TRPM4Q8TD43 1214 aa8.58□□□□□ -1.04
CHD9-215ENST00000565442 ARXQ96QS3 562 aa8.58□□□□□ -1.04
CHD9-215ENST00000565442 AKTIPQ9H8T0 292 aa8.58□□□□□ -1.04
CHD9-215ENST00000565442 RBM19Q9Y4C8 960 aaKnown RBP8.58□□□□□ -1.04
CHD9-215ENST00000565442 ZBTB42B2RXF5 422 aa8.57□□□□□ -1.04
CHD9-215ENST00000565442 DLL1O00548 723 aa8.57□□□□□ -1.04
CHD9-215ENST00000565442 GRNP28799 593 aaKnown RBP8.57□□□□□ -1.04
CHD9-215ENST00000565442 CHMP7Q8WUX9 453 aaPredicted RBP8.57□□□□□ -1.04
CHD9-215ENST00000565442 SCG3Q8WXD2 468 aaKnown RBP8.57□□□□□ -1.04
CHD9-215ENST00000565442 ZNF594Q96JF6 807 aaPredicted RBP8.57□□□□□ -1.04
CHD9-215ENST00000565442 CALR3Q96L12 384 aaKnown RBP8.57□□□□□ -1.04
CHD9-215ENST00000565442 FMNL2Q96PY5 1086 aa8.57□□□□□ -1.04
CHD9-215ENST00000565442 ZFATQ9P243 1243 aa8.57□□□□□ -1.04
CHD9-215ENST00000565442 BCS1LQ9Y276 419 aa8.57□□□□□ -1.04
CHD9-215ENST00000565442 DKK1O94907 266 aa8.56□□□□□ -1.04
CHD9-215ENST00000565442 IRAK1P51617 712 aa8.56□□□□□ -1.04
CHD9-215ENST00000565442 GPLD1P80108 840 aa8.56□□□□□ -1.04
CHD9-215ENST00000565442 MLLT1Q03111 559 aaPredicted RBP8.56□□□□□ -1.04
CHD9-215ENST00000565442 KRT25Q7Z3Z0 450 aa8.56□□□□□ -1.04
CHD9-215ENST00000565442 GLMNQ92990 594 aa8.56□□□□□ -1.04
CHD9-215ENST00000565442 CCDC97Q96F63 343 aaPredicted RBP8.56□□□□□ -1.04
CHD9-215ENST00000565442 MKRN1Q9UHC7 482 aaKnown RBP8.56□□□□□ -1.04
CHD9-215ENST00000565442 HDGFL1Q5TGJ6 251 aa8.55□□□□□ -1.04
CHD9-215ENST00000565442 UCN2Q96RP3 112 aa8.55□□□□□ -1.04
CHD9-215ENST00000565442 SMG9Q9H0W8 520 aaKnown RBP8.55□□□□□ -1.04
CHD9-215ENST00000565442 ATP9BO43861 1147 aa8.54□□□□□ -1.04
CHD9-215ENST00000565442 COBLO75128 1261 aa8.54□□□□□ -1.04
CHD9-215ENST00000565442 ALX3O95076 343 aa8.54□□□□□ -1.04
CHD9-215ENST00000565442 YBX3P16989 372 aaKnown RBP eCLIP8.54□□□□□ -1.04
CHD9-215ENST00000565442 INPP5BP32019 993 aa8.54□□□□□ -1.04
CHD9-215ENST00000565442 ADAMTS19Q8TE59 1207 aa8.54□□□□□ -1.04
CHD9-215ENST00000565442 MRPL18Q9H0U6 180 aaKnown RBP8.54□□□□□ -1.04
CHD9-215ENST00000565442 SERPINA10Q9UK55 444 aa8.54□□□□□ -1.04
CHD9-215ENST00000565442 IDH3AP50213 366 aa8.53□□□□□ -1.04
CHD9-215ENST00000565442 HOMEZQ8IX15 550 aa8.53□□□□□ -1.04
CHD9-215ENST00000565442 TMEM130Q8N3G9 435 aa8.53□□□□□ -1.04
CHD9-215ENST00000565442 IFT43Q96FT9 208 aa8.53□□□□□ -1.04
CHD9-215ENST00000565442 F8W735 103 aaPredicted RBP8.52□□□□□ -1.05
CHD9-215ENST00000565442 RARAP10276 462 aa8.52□□□□□ -1.05
CHD9-215ENST00000565442 TARSP26639 723 aaKnown RBP8.52□□□□□ -1.05
CHD9-215ENST00000565442 PTCD1O75127 700 aaKnown RBP8.51□□□□□ -1.05
CHD9-215ENST00000565442 HFE2Q6ZVN8 426 aa8.51□□□□□ -1.05
CHD9-215ENST00000565442 C11orf16Q9NQ32 467 aa8.51□□□□□ -1.05
CHD9-215ENST00000565442 KIAA1324LA8MWY0 1029 aaPredicted RBP8.5□□□□□ -1.05
CHD9-215ENST00000565442 SASH3O75995 380 aa8.5□□□□□ -1.05
CHD9-215ENST00000565442 TAL1P17542 331 aaPredicted RBP8.5□□□□□ -1.05
CHD9-215ENST00000565442 EIF2AK2P19525 551 aaKnown RBP8.5□□□□□ -1.05
CHD9-215ENST00000565442 ARID4AP29374 1257 aaPredicted RBP8.5□□□□□ -1.05
CHD9-215ENST00000565442 ARSDP51689 593 aa8.5□□□□□ -1.05
CHD9-215ENST00000565442 NRLP54845 237 aa8.5□□□□□ -1.05
CHD9-215ENST00000565442 SEC13P55735 322 aa8.5□□□□□ -1.05
CHD9-215ENST00000565442 Q6ZS46 218 aa8.5□□□□□ -1.05
CHD9-215ENST00000565442 OAS3Q9Y6K5 1087 aaKnown RBP8.5□□□□□ -1.05
CHD9-215ENST00000565442 GSC2O15499 205 aa8.49□□□□□ -1.05
CHD9-215ENST00000565442 RASA1P20936 1047 aa8.49□□□□□ -1.05
CHD9-215ENST00000565442 SRA1Q9HD15 236 aaKnown RBP8.49□□□□□ -1.05
CHD9-215ENST00000565442 KLK14Q9P0G3 267 aa8.49□□□□□ -1.05
CHD9-215ENST00000565442 RAXQ9Y2V3 346 aa8.49□□□□□ -1.05
CHD9-215ENST00000565442 MED26O95402 600 aa8.48□□□□□ -1.05
CHD9-215ENST00000565442 TGFB1P01137 390 aa8.48□□□□□ -1.05
CHD9-215ENST00000565442 IGLV1-40P01703 118 aa8.48□□□□□ -1.05
CHD9-215ENST00000565442 GP2P55259 537 aaKnown RBP8.48□□□□□ -1.05
CHD9-215ENST00000565442 DCAF11Q8TEB1 546 aa8.47□□□□□ -1.05
CHD9-215ENST00000565442 PLD4Q96BZ4 506 aa8.47□□□□□ -1.05
CHD9-215ENST00000565442 GLB1P16278 677 aa8.46□□□□□ -1.06
CHD9-215ENST00000565442 IGFBP4P22692 258 aa8.46□□□□□ -1.06
CHD9-215ENST00000565442 DGKZQ13574 1117 aa8.46□□□□□ -1.06
CHD9-215ENST00000565442 GDF6Q6KF10 455 aaPredicted RBP8.46□□□□□ -1.06
CHD9-215ENST00000565442 MAP4K3Q8IVH8 894 aa8.46□□□□□ -1.06
CHD9-215ENST00000565442 AGGF1Q8N302 714 aaeCLIP8.46□□□□□ -1.06
CHD9-215ENST00000565442 IL22RA1Q8N6P7 574 aa8.46□□□□□ -1.06
CHD9-215ENST00000565442 HINFPQ9BQA5 517 aa8.46□□□□□ -1.06
CHD9-215ENST00000565442 TLR7Q9NYK1 1049 aaKnown RBP8.46□□□□□ -1.06
CHD9-215ENST00000565442 RNF114Q9Y508 228 aa8.46□□□□□ -1.06
CHD9-215ENST00000565442 SETDB1Q15047 1291 aa8.45□□□□□ -1.06
CHD9-215ENST00000565442 MICAL2O94851 1124 aa8.44□□□□□ -1.06
CHD9-215ENST00000565442 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.44□□□□□ -1.06
CHD9-215ENST00000565442 STOML1Q9UBI4 398 aa8.44□□□□□ -1.06
CHD9-215ENST00000565442 LOC102724428A0A0B4J2F2 783 aa8.43□□□□□ -1.06
CHD9-215ENST00000565442 J3QW42 95 aa8.43□□□□□ -1.06
CHD9-215ENST00000565442 LGR5O75473 907 aa8.43□□□□□ -1.06
CHD9-215ENST00000565442 EGFRP00533 1210 aa8.43□□□□□ -1.06
CHD9-215ENST00000565442 RFX1P22670 979 aa8.43□□□□□ -1.06
CHD9-215ENST00000565442 SIK1P57059 783 aa8.43□□□□□ -1.06
CHD9-215ENST00000565442 PPP1R12CQ9BZL4 782 aa8.43□□□□□ -1.06
CHD9-215ENST00000565442 QTRT2Q9H974 415 aaKnown RBP8.43□□□□□ -1.06
CHD9-215ENST00000565442 GHRHP01286 108 aa8.42□□□□□ -1.06
CHD9-215ENST00000565442 PSAPP07602 524 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms