RNA–Protein interactions for RNA: ENST00000565210.5

CDH11-211, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-211ENST00000565210 IGKV5-2P06315 115 aa28.6■■■□□ 2.17
CDH11-211ENST00000565210 CDHR2Q9BYE9 1310 aa28.6■■■□□ 2.17
CDH11-211ENST00000565210 NEURL1BA8MQ27 555 aa28.59■■■□□ 2.17
CDH11-211ENST00000565210 SLFN5Q08AF3 891 aa28.59■■■□□ 2.17
CDH11-211ENST00000565210 DPP8Q6V1X1 898 aaPredicted RBP28.59■■■□□ 2.17
CDH11-211ENST00000565210 MPNDQ8N594 471 aa28.59■■■□□ 2.17
CDH11-211ENST00000565210 LINS1Q8NG48 757 aa28.59■■■□□ 2.17
CDH11-211ENST00000565210 CCDC88AQ3V6T2 1871 aa28.58■■■□□ 2.17
CDH11-211ENST00000565210 CACNA1FO60840 1977 aa28.57■■■□□ 2.16
CDH11-211ENST00000565210 CWF19L2Q2TBE0 894 aaKnown RBP28.57■■■□□ 2.16
CDH11-211ENST00000565210 LARGE2Q8N3Y3 721 aa28.57■■■□□ 2.16
CDH11-211ENST00000565210 RPS8P62241 208 aaKnown RBP28.56■■■□□ 2.16
CDH11-211ENST00000565210 RBM46Q8TBY0 533 aaKnown RBP28.56■■■□□ 2.16
CDH11-211ENST00000565210 EIF6P56537 245 aaKnown RBP28.55■■■□□ 2.16
CDH11-211ENST00000565210 MIER1Q8N108 512 aa28.55■■■□□ 2.16
CDH11-211ENST00000565210 DICER1Q9UPY3 1922 aaKnown RBP28.55■■■□□ 2.16
CDH11-211ENST00000565210 GCKRQ14397 625 aa28.54■■■□□ 2.16
CDH11-211ENST00000565210 JARID2Q92833 1246 aaPredicted RBP28.54■■■□□ 2.16
CDH11-211ENST00000565210 RTFDC1Q9BY42 306 aaPredicted RBP28.54■■■□□ 2.16
CDH11-211ENST00000565210 SNED1Q8TER0 1413 aa28.53■■■□□ 2.16
CDH11-211ENST00000565210 TIAM2Q8IVF5 1701 aa28.53■■■□□ 2.16
CDH11-211ENST00000565210 IQCA1LA6NCM1 817 aa28.53■■■□□ 2.16
CDH11-211ENST00000565210 H7C1W4 665 aa28.53■■■□□ 2.16
CDH11-211ENST00000565210 FZD9O00144 591 aa28.53■■■□□ 2.16
CDH11-211ENST00000565210 PPIP5K2O43314 1243 aa28.53■■■□□ 2.16
CDH11-211ENST00000565210 DDNO94850 711 aaPredicted RBP28.53■■■□□ 2.16
CDH11-211ENST00000565210 NIM1KQ8IY84 436 aa28.53■■■□□ 2.16
CDH11-211ENST00000565210 CELF1Q92879 486 aaKnown RBP28.53■■■□□ 2.16
CDH11-211ENST00000565210 CT47B1P0C2W7 299 aaPredicted RBP28.51■■■□□ 2.15
CDH11-211ENST00000565210 CTSWP56202 376 aa28.51■■■□□ 2.15
CDH11-211ENST00000565210 FSTL1Q12841 308 aa28.51■■■□□ 2.15
CDH11-211ENST00000565210 UBE3BQ7Z3V4 1068 aa28.51■■■□□ 2.15
CDH11-211ENST00000565210 CDC5LQ99459 802 aaKnown RBP28.51■■■□□ 2.15
CDH11-211ENST00000565210 DDX60Q8IY21 1712 aaKnown RBP28.51■■■□□ 2.15
CDH11-211ENST00000565210 LAMB2P55268 1798 aa28.5■■■□□ 2.15
CDH11-211ENST00000565210 NSFL1CQ9UNZ2 370 aaKnown RBP28.5■■■□□ 2.15
CDH11-211ENST00000565210 ANKRD18AQ8IVF6 992 aa28.49■■■□□ 2.15
CDH11-211ENST00000565210 CDCA7LQ96GN5 454 aa28.49■■■□□ 2.15
CDH11-211ENST00000565210 F6X3S4 739 aa28.48■■■□□ 2.15
CDH11-211ENST00000565210 BEND3Q5T5X7 828 aa28.48■■■□□ 2.15
CDH11-211ENST00000565210 GPC2Q8N158 579 aa28.48■■■□□ 2.15
CDH11-211ENST00000565210 SMC1BQ8NDV3 1235 aa28.48■■■□□ 2.15
CDH11-211ENST00000565210 SEC31BQ9NQW1 1179 aa28.48■■■□□ 2.15
CDH11-211ENST00000565210 HSPA6P17066 643 aa28.47■■■□□ 2.15
CDH11-211ENST00000565210 AOC3Q16853 763 aa28.47■■■□□ 2.15
CDH11-211ENST00000565210 ALDH1L2Q3SY69 923 aa28.47■■■□□ 2.15
CDH11-211ENST00000565210 TRMT2AQ8IZ69 625 aaKnown RBP28.47■■■□□ 2.15
CDH11-211ENST00000565210 TTLL11Q8NHH1 800 aa28.47■■■□□ 2.15
CDH11-211ENST00000565210 L3MBTL3Q96JM7 780 aaPredicted RBP28.47■■■□□ 2.15
CDH11-211ENST00000565210 CCDC85AQ96PX6 553 aaPredicted RBP28.47■■■□□ 2.15
CDH11-211ENST00000565210 EYA3Q99504 573 aa28.47■■■□□ 2.15
CDH11-211ENST00000565210 PLA2G12BQ9BX93 195 aa28.47■■■□□ 2.15
CDH11-211ENST00000565210 PTPRCP08575 1304 aa28.46■■■□□ 2.15
CDH11-211ENST00000565210 ALDH1L1O75891 902 aa28.46■■■□□ 2.15
CDH11-211ENST00000565210 KIAA2012Q0VF49 1180 aa28.46■■■□□ 2.15
CDH11-211ENST00000565210 SLC4A10Q6U841 1118 aa28.46■■■□□ 2.15
CDH11-211ENST00000565210 MRPL50Q8N5N7 158 aaKnown RBP28.46■■■□□ 2.15
CDH11-211ENST00000565210 C6orf229H3BNL8 230 aa28.45■■■□□ 2.14
CDH11-211ENST00000565210 SRCIN1Q9C0H9 1055 aa28.45■■■□□ 2.14
CDH11-211ENST00000565210 ZNRF3Q9ULT6 936 aa28.45■■■□□ 2.14
CDH11-211ENST00000565210 ZNF541Q9H0D2 1346 aa28.44■■■□□ 2.14
CDH11-211ENST00000565210 WDR90Q96KV7 1748 aa28.44■■■□□ 2.14
CDH11-211ENST00000565210 POTECB2RU33 542 aa28.44■■■□□ 2.14
CDH11-211ENST00000565210 WASHC4Q2M389 1173 aa28.44■■■□□ 2.14
CDH11-211ENST00000565210 C9orf78Q9NZ63 289 aaPredicted RBP28.44■■■□□ 2.14
CDH11-211ENST00000565210 ANKIB1Q9P2G1 1089 aa28.44■■■□□ 2.14
CDH11-211ENST00000565210 SSH1Q8WYL5 1049 aa28.43■■■□□ 2.14
CDH11-211ENST00000565210 HACL1Q9UJ83 578 aa28.43■■■□□ 2.14
CDH11-211ENST00000565210 GJA3Q9Y6H8 435 aa28.43■■■□□ 2.14
CDH11-211ENST00000565210 RTL9Q8NET4 1388 aa28.42■■■□□ 2.14
CDH11-211ENST00000565210 IGHMBP2P38935 993 aaKnown RBP28.42■■■□□ 2.14
CDH11-211ENST00000565210 GPSM2P81274 684 aa28.42■■■□□ 2.14
CDH11-211ENST00000565210 SLC51AQ86UW1 340 aa28.42■■■□□ 2.14
CDH11-211ENST00000565210 PODXL2Q9NZ53 605 aa28.42■■■□□ 2.14
CDH11-211ENST00000565210 LMOD1P29536 600 aaPredicted RBP28.41■■■□□ 2.14
CDH11-211ENST00000565210 GREM2Q9H772 168 aa28.41■■■□□ 2.14
CDH11-211ENST00000565210 GRM8O00222 908 aa28.4■■■□□ 2.14
CDH11-211ENST00000565210 CASP7P55210 303 aa28.4■■■□□ 2.14
CDH11-211ENST00000565210 ZC3H12CQ9C0D7 883 aaKnown RBP28.4■■■□□ 2.14
CDH11-211ENST00000565210 SMC4Q9NTJ3 1288 aa28.4■■■□□ 2.14
CDH11-211ENST00000565210 BSDC1Q9NW68 430 aaPredicted RBP28.4■■■□□ 2.14
CDH11-211ENST00000565210 GGA1Q9UJY5 639 aa28.4■■■□□ 2.14
CDH11-211ENST00000565210 CSF1RP07333 972 aa28.39■■■□□ 2.14
CDH11-211ENST00000565210 APLP1P51693 650 aa28.39■■■□□ 2.14
CDH11-211ENST00000565210 TNIP1Q15025 636 aa28.39■■■□□ 2.14
CDH11-211ENST00000565210 PNMA8AQ86V59 439 aaPredicted RBP28.39■■■□□ 2.14
CDH11-211ENST00000565210 G3V3G9 751 aa28.38■■■□□ 2.13
CDH11-211ENST00000565210 DCAF8Q5TAQ9 597 aa28.38■■■□□ 2.13
CDH11-211ENST00000565210 TBC1D16Q8TBP0 767 aa28.38■■■□□ 2.13
CDH11-211ENST00000565210 MPHOSPH8Q99549 860 aa28.38■■■□□ 2.13
CDH11-211ENST00000565210 TAF1DQ9H5J8 278 aaPredicted RBP28.38■■■□□ 2.13
CDH11-211ENST00000565210 POLLQ9UGP5 575 aa28.38■■■□□ 2.13
CDH11-211ENST00000565210 ITGA6P23229 1130 aa28.37■■■□□ 2.13
CDH11-211ENST00000565210 HNRNPUQ00839 825 aaKnown RBP eCLIP28.37■■■□□ 2.13
CDH11-211ENST00000565210 CIAPIN1Q6FI81 312 aa28.37■■■□□ 2.13
CDH11-211ENST00000565210 XDHP47989 1333 aa28.37■■■□□ 2.13
CDH11-211ENST00000565210 ANKRD18BA2A2Z9 1011 aa28.36■■■□□ 2.13
CDH11-211ENST00000565210 UFL1O94874 794 aa28.36■■■□□ 2.13
CDH11-211ENST00000565210 ATP2B4P23634 1241 aa28.36■■■□□ 2.13
CDH11-211ENST00000565210 EPHX2P34913 555 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms