RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 TTC41PQ6P2S7 1318 aa7.27□□□□□ -1.24
PTPN9-204ENST00000564970 ARHGEF12Q9NZN5 1544 aa7.27□□□□□ -1.25
PTPN9-204ENST00000564970 PSDA5PKW4 1024 aaPredicted RBP7.27□□□□□ -1.25
PTPN9-204ENST00000564970 ERC2O15083 957 aa7.27□□□□□ -1.25
PTPN9-204ENST00000564970 PPFIA3O75145 1194 aa7.27□□□□□ -1.25
PTPN9-204ENST00000564970 CCDC192P0DO97 292 aa7.27□□□□□ -1.25
PTPN9-204ENST00000564970 VCAM1P19320 739 aa7.27□□□□□ -1.25
PTPN9-204ENST00000564970 GCKP35557 465 aa7.27□□□□□ -1.25
PTPN9-204ENST00000564970 PSMD7P51665 324 aa7.27□□□□□ -1.25
PTPN9-204ENST00000564970 RBM5P52756 815 aaKnown RBP eCLIP7.27□□□□□ -1.25
PTPN9-204ENST00000564970 SCRN1Q12765 414 aa7.27□□□□□ -1.25
PTPN9-204ENST00000564970 PSMD2Q13200 908 aa7.27□□□□□ -1.25
PTPN9-204ENST00000564970 DCTN1Q14203 1278 aa7.27□□□□□ -1.25
PTPN9-204ENST00000564970 CCDC57Q2TAC2 916 aa7.27□□□□□ -1.25
PTPN9-204ENST00000564970 CCDC178Q5BJE1 867 aa7.27□□□□□ -1.25
PTPN9-204ENST00000564970 TTC19Q6DKK2 380 aaPredicted RBP7.27□□□□□ -1.25
PTPN9-204ENST00000564970 ZNF280DQ6N043 979 aa7.27□□□□□ -1.25
PTPN9-204ENST00000564970 B4GALNT4Q76KP1 1039 aa7.27□□□□□ -1.25
PTPN9-204ENST00000564970 CCDC80Q76M96 950 aa7.27□□□□□ -1.25
PTPN9-204ENST00000564970 IQCA1Q86XH1 822 aa7.27□□□□□ -1.25
PTPN9-204ENST00000564970 L3MBTL2Q969R5 705 aa7.27□□□□□ -1.25
PTPN9-204ENST00000564970 JAKMIP2Q96AA8 810 aa7.27□□□□□ -1.25
PTPN9-204ENST00000564970 RSRC1Q96IZ7 334 aaKnown RBP7.27□□□□□ -1.25
PTPN9-204ENST00000564970 C16orf45Q96MC5 204 aaPredicted RBP7.27□□□□□ -1.25
PTPN9-204ENST00000564970 MTA3Q9BTC8 594 aa7.27□□□□□ -1.25
PTPN9-204ENST00000564970 GGA2Q9UJY4 613 aa7.27□□□□□ -1.25
PTPN9-204ENST00000564970 PHLPP2Q6ZVD8 1323 aa7.27□□□□□ -1.25
PTPN9-204ENST00000564970 EBAG9O00559 213 aa7.26□□□□□ -1.25
PTPN9-204ENST00000564970 ABLIM1O14639 778 aa7.26□□□□□ -1.25
PTPN9-204ENST00000564970 E2F6O75461 281 aa7.26□□□□□ -1.25
PTPN9-204ENST00000564970 FSBPO95073 299 aa7.26□□□□□ -1.25
PTPN9-204ENST00000564970 SKILP12757 684 aa7.26□□□□□ -1.25
PTPN9-204ENST00000564970 GCLCP48506 637 aaPredicted RBP7.26□□□□□ -1.25
PTPN9-204ENST00000564970 RAB27AP51159 221 aa7.26□□□□□ -1.25
PTPN9-204ENST00000564970 ROR2Q01974 943 aaKnown RBP7.26□□□□□ -1.25
PTPN9-204ENST00000564970 CCDC93Q567U6 631 aa7.26□□□□□ -1.25
PTPN9-204ENST00000564970 LUZP1Q86V48 1076 aa7.26□□□□□ -1.25
PTPN9-204ENST00000564970 CACTIN-AS1Q8N1I8 211 aa7.26□□□□□ -1.25
PTPN9-204ENST00000564970 PROCA1Q8NCQ7 364 aaPredicted RBP7.26□□□□□ -1.25
PTPN9-204ENST00000564970 FAM81AQ8TBF8 368 aa7.26□□□□□ -1.25
PTPN9-204ENST00000564970 SMCR8Q8TEV9 937 aaPredicted RBP7.26□□□□□ -1.25
PTPN9-204ENST00000564970 RTF1Q92541 710 aaKnown RBP7.26□□□□□ -1.25
PTPN9-204ENST00000564970 SLX1AQ9BQ83 275 aa7.26□□□□□ -1.25
PTPN9-204ENST00000564970 MOV10L1Q9BXT6 1211 aaKnown RBP7.26□□□□□ -1.25
PTPN9-204ENST00000564970 RMI1Q9H9A7 625 aa7.26□□□□□ -1.25
PTPN9-204ENST00000564970 ORC3Q9UBD5 711 aaPredicted RBP7.26□□□□□ -1.25
PTPN9-204ENST00000564970 ZNF232Q9UNY5 417 aa7.26□□□□□ -1.25
PTPN9-204ENST00000564970 RIPOR2Q9Y4F9 1068 aa7.26□□□□□ -1.25
PTPN9-204ENST00000564970 CTDP1Q9Y5B0 961 aaPredicted RBP7.26□□□□□ -1.25
PTPN9-204ENST00000564970 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.26□□□□□ -1.25
PTPN9-204ENST00000564970 NUP160Q12769 1436 aa7.26□□□□□ -1.25
PTPN9-204ENST00000564970 PPIP5K1Q6PFW1 1433 aa7.26□□□□□ -1.25
PTPN9-204ENST00000564970 CCDC141Q6ZP82 1450 aa7.25□□□□□ -1.25
PTPN9-204ENST00000564970 POLR3AO14802 1390 aaPredicted RBP7.25□□□□□ -1.25
PTPN9-204ENST00000564970 ANKRD30BQ9BXX2 1392 aa7.25□□□□□ -1.25
PTPN9-204ENST00000564970 MAP2K7O14733 419 aa7.25□□□□□ -1.25
PTPN9-204ENST00000564970 ZSCAN9O15535 394 aaPredicted RBP7.25□□□□□ -1.25
PTPN9-204ENST00000564970 HARSP12081 509 aaKnown RBP7.25□□□□□ -1.25
PTPN9-204ENST00000564970 FERP16591 822 aa7.25□□□□□ -1.25
PTPN9-204ENST00000564970 INPP5BP32019 993 aa7.25□□□□□ -1.25
PTPN9-204ENST00000564970 CLNS1AP54105 237 aaKnown RBP7.25□□□□□ -1.25
PTPN9-204ENST00000564970 UBE2HP62256 183 aa7.25□□□□□ -1.25
PTPN9-204ENST00000564970 ST5P78524 1137 aa7.25□□□□□ -1.25
PTPN9-204ENST00000564970 DYNC1I2Q13409 638 aaKnown RBP7.25□□□□□ -1.25
PTPN9-204ENST00000564970 TSNAXIP1Q2TAA8 658 aa7.25□□□□□ -1.25
PTPN9-204ENST00000564970 KIF4BQ2VIQ3 1234 aa7.25□□□□□ -1.25
PTPN9-204ENST00000564970 SLC4A8Q2Y0W8 1093 aa7.25□□□□□ -1.25
PTPN9-204ENST00000564970 ARHGAP29Q52LW3 1261 aa7.25□□□□□ -1.25
PTPN9-204ENST00000564970 CDCA2Q69YH5 1023 aaPredicted RBP7.25□□□□□ -1.25
PTPN9-204ENST00000564970 ZSCAN25Q6NSZ9 544 aa7.25□□□□□ -1.25
PTPN9-204ENST00000564970 HDXQ7Z353 690 aa7.25□□□□□ -1.25
PTPN9-204ENST00000564970 GAS2L2Q8NHY3 880 aa7.25□□□□□ -1.25
PTPN9-204ENST00000564970 FAM76AQ8TAV0 307 aa7.25□□□□□ -1.25
PTPN9-204ENST00000564970 RABGGTAQ92696 567 aa7.25□□□□□ -1.25
PTPN9-204ENST00000564970 KCNB2Q92953 911 aa7.25□□□□□ -1.25
PTPN9-204ENST00000564970 ALS2CR12Q96Q35 445 aa7.25□□□□□ -1.25
PTPN9-204ENST00000564970 RBM42Q9BTD8 480 aaKnown RBP7.25□□□□□ -1.25
PTPN9-204ENST00000564970 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.25□□□□□ -1.25
PTPN9-204ENST00000564970 PDRG1Q9NUG6 133 aa7.25□□□□□ -1.25
PTPN9-204ENST00000564970 SWAP70Q9UH65 585 aa7.25□□□□□ -1.25
PTPN9-204ENST00000564970 DNAI1Q9UI46 699 aa7.25□□□□□ -1.25
PTPN9-204ENST00000564970 WDR37Q9Y2I8 494 aa7.25□□□□□ -1.25
PTPN9-204ENST00000564970 ADCY10Q96PN6 1610 aa7.25□□□□□ -1.25
PTPN9-204ENST00000564970 GLI2P10070 1586 aa7.25□□□□□ -1.25
PTPN9-204ENST00000564970 ERICH2A1L162 156 aa7.24□□□□□ -1.25
PTPN9-204ENST00000564970 SMAPO00193 183 aa7.24□□□□□ -1.25
PTPN9-204ENST00000564970 IPO5O00410 1097 aaKnown RBP7.24□□□□□ -1.25
PTPN9-204ENST00000564970 BRD1O95696 1058 aa7.24□□□□□ -1.25
PTPN9-204ENST00000564970 TBC1D8O95759 1140 aa7.24□□□□□ -1.25
PTPN9-204ENST00000564970 FAM163BP0C2L3 166 aa7.24□□□□□ -1.25
PTPN9-204ENST00000564970 LRRFIP1Q32MZ4 808 aaKnown RBP7.24□□□□□ -1.25
PTPN9-204ENST00000564970 NUGGCQ68CJ6 796 aa7.24□□□□□ -1.25
PTPN9-204ENST00000564970 CC2D1AQ6P1N0 951 aaPredicted RBP7.24□□□□□ -1.25
PTPN9-204ENST00000564970 SARM1Q6SZW1 724 aa7.24□□□□□ -1.25
PTPN9-204ENST00000564970 LRRC31Q6UY01 552 aa7.24□□□□□ -1.25
PTPN9-204ENST00000564970 CCDC73Q6ZRK6 1079 aa7.24□□□□□ -1.25
PTPN9-204ENST00000564970 OTUD6AQ7L8S5 288 aa7.24□□□□□ -1.25
PTPN9-204ENST00000564970 FAM114A1Q8IWE2 563 aa7.24□□□□□ -1.25
PTPN9-204ENST00000564970 TRIM42Q8IWZ5 723 aa7.24□□□□□ -1.25
PTPN9-204ENST00000564970 MYOCDQ8IZQ8 938 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms