RNA–Protein interactions for RNA: ENST00000564814.1

GINS3-205, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-205ENST00000564814 ARXQ96QS3 562 aa9.36□□□□□ -0.91
GINS3-205ENST00000564814 SGIP1Q9BQI5 828 aa9.36□□□□□ -0.91
GINS3-205ENST00000564814 TRMT112Q9UI30 125 aaKnown RBP9.36□□□□□ -0.91
GINS3-205ENST00000564814 PDZRN3Q9UPQ7 1066 aa9.36□□□□□ -0.91
GINS3-205ENST00000564814 GTF3C3Q9Y5Q9 886 aa9.36□□□□□ -0.91
GINS3-205ENST00000564814 LRRFIP2Q9Y608 721 aaKnown RBP9.36□□□□□ -0.91
GINS3-205ENST00000564814 ANKRD31Q8N7Z5 1873 aa9.36□□□□□ -0.91
GINS3-205ENST00000564814 GPTP24298 496 aa9.35□□□□□ -0.91
GINS3-205ENST00000564814 IRX6P78412 446 aaPredicted RBP9.35□□□□□ -0.91
GINS3-205ENST00000564814 CRY2Q49AN0 593 aa9.35□□□□□ -0.91
GINS3-205ENST00000564814 GCC1Q96CN9 775 aa9.35□□□□□ -0.91
GINS3-205ENST00000564814 RWDD1Q9H446 243 aaPredicted RBP9.35□□□□□ -0.91
GINS3-205ENST00000564814 BICC1Q9H694 974 aaKnown RBP9.35□□□□□ -0.91
GINS3-205ENST00000564814 NOP58Q9Y2X3 529 aaKnown RBP9.35□□□□□ -0.91
GINS3-205ENST00000564814 DLEC1Q9Y238 1755 aa9.35□□□□□ -0.91
GINS3-205ENST00000564814 C10orf71Q711Q0 1435 aa9.34□□□□□ -0.91
GINS3-205ENST00000564814 IRS4O14654 1257 aaPredicted RBP9.34□□□□□ -0.91
GINS3-205ENST00000564814 SERPINB2P05120 415 aa9.34□□□□□ -0.91
GINS3-205ENST00000564814 RFX5P48382 616 aaPredicted RBP9.34□□□□□ -0.91
GINS3-205ENST00000564814 CTSWP56202 376 aa9.34□□□□□ -0.91
GINS3-205ENST00000564814 DDR1Q08345 913 aa9.34□□□□□ -0.91
GINS3-205ENST00000564814 SMIM5Q71RC9 77 aa9.34□□□□□ -0.91
GINS3-205ENST00000564814 CENPQQ7L2Z9 268 aaPredicted RBP9.34□□□□□ -0.91
GINS3-205ENST00000564814 TTLL11Q8NHH1 800 aa9.34□□□□□ -0.91
GINS3-205ENST00000564814 FAM89AQ96GI7 184 aa9.34□□□□□ -0.91
GINS3-205ENST00000564814 DCTPP1Q9H773 170 aa9.34□□□□□ -0.91
GINS3-205ENST00000564814 COPRSQ9NQ92 184 aa9.34□□□□□ -0.91
GINS3-205ENST00000564814 TNRC6CQ9HCJ0 1690 aaKnown RBP9.34□□□□□ -0.91
GINS3-205ENST00000564814 ABCC12Q96J65 1359 aa9.34□□□□□ -0.91
GINS3-205ENST00000564814 PNMA6EA0A0J9YXQ4 647 aa9.33□□□□□ -0.92
GINS3-205ENST00000564814 HSP90AB4PQ58FF6 505 aa9.33□□□□□ -0.92
GINS3-205ENST00000564814 EPHA10Q5JZY3 1008 aa9.33□□□□□ -0.92
GINS3-205ENST00000564814 COL13A1Q5TAT6 717 aaPredicted RBP9.33□□□□□ -0.92
GINS3-205ENST00000564814 PRR5LQ6MZQ0 368 aa9.33□□□□□ -0.92
GINS3-205ENST00000564814 NBPF5PQ86XG9 351 aaPredicted RBP9.33□□□□□ -0.92
GINS3-205ENST00000564814 CNBD1Q8NA66 436 aa9.33□□□□□ -0.92
GINS3-205ENST00000564814 LRRC37AA6NMS7 1700 aa9.32□□□□□ -0.92
GINS3-205ENST00000564814 CIAO1O76071 339 aa9.32□□□□□ -0.92
GINS3-205ENST00000564814 MMP10P09238 476 aa9.32□□□□□ -0.92
GINS3-205ENST00000564814 POLD1P28340 1107 aa9.32□□□□□ -0.92
GINS3-205ENST00000564814 HOXA10P31260 410 aaPredicted RBP9.32□□□□□ -0.92
GINS3-205ENST00000564814 ST5P78524 1137 aa9.32□□□□□ -0.92
GINS3-205ENST00000564814 CCDC152Q4G0S7 254 aa9.32□□□□□ -0.92
GINS3-205ENST00000564814 LMBR1LQ6UX01 489 aa9.32□□□□□ -0.92
GINS3-205ENST00000564814 PELP1Q8IZL8 1130 aaKnown RBP9.32□□□□□ -0.92
GINS3-205ENST00000564814 CCDC136Q96JN2 1154 aa9.32□□□□□ -0.92
GINS3-205ENST00000564814 NLRP3Q96P20 1036 aa9.32□□□□□ -0.92
GINS3-205ENST00000564814 BRIP1Q9BX63 1249 aa9.32□□□□□ -0.92
GINS3-205ENST00000564814 KIAA1551Q9HCM1 1747 aa9.31□□□□□ -0.92
GINS3-205ENST00000564814 ZBTB22O15209 634 aa9.31□□□□□ -0.92
GINS3-205ENST00000564814 SRGAP3O43295 1099 aa9.31□□□□□ -0.92
GINS3-205ENST00000564814 RAB11FIP3O75154 756 aa9.31□□□□□ -0.92
GINS3-205ENST00000564814 IGHDP01880 384 aa9.31□□□□□ -0.92
GINS3-205ENST00000564814 PTPN12Q05209 780 aaKnown RBP9.31□□□□□ -0.92
GINS3-205ENST00000564814 GPR162Q16538 588 aa9.31□□□□□ -0.92
GINS3-205ENST00000564814 ERFEQ4G0M1 354 aa9.31□□□□□ -0.92
GINS3-205ENST00000564814 TNS4Q8IZW8 715 aa9.31□□□□□ -0.92
GINS3-205ENST00000564814 C1orf115Q9H7X2 142 aa9.31□□□□□ -0.92
GINS3-205ENST00000564814 PARP3Q9Y6F1 533 aa9.31□□□□□ -0.92
GINS3-205ENST00000564814 A0A1B0GUL6 1792 aa9.31□□□□□ -0.92
GINS3-205ENST00000564814 COL11A2P13942 1736 aaPredicted RBP9.31□□□□□ -0.92
GINS3-205ENST00000564814 BRCA1P38398 1863 aaKnown RBP9.3□□□□□ -0.92
GINS3-205ENST00000564814 TMC4Q7Z404 712 aa9.3□□□□□ -0.92
GINS3-205ENST00000564814 NUTM1Q86Y26 1132 aa9.3□□□□□ -0.92
GINS3-205ENST00000564814 ERC1Q8IUD2 1116 aa9.3□□□□□ -0.92
GINS3-205ENST00000564814 SYNE4Q8N205 404 aa9.3□□□□□ -0.92
GINS3-205ENST00000564814 CRAMP1Q96RY5 1269 aa9.3□□□□□ -0.92
GINS3-205ENST00000564814 GPR108Q9NPR9 543 aa9.3□□□□□ -0.92
GINS3-205ENST00000564814 LTBP1Q14766 1721 aa9.29□□□□□ -0.92
GINS3-205ENST00000564814 ARAP2Q8WZ64 1704 aa9.29□□□□□ -0.92
GINS3-205ENST00000564814 ITGA6P23229 1130 aa9.29□□□□□ -0.92
GINS3-205ENST00000564814 GTF2E1P29083 439 aaPredicted RBP9.29□□□□□ -0.92
GINS3-205ENST00000564814 PDE6BP35913 854 aa9.29□□□□□ -0.92
GINS3-205ENST00000564814 IFIT5Q13325 482 aaKnown RBP9.29□□□□□ -0.92
GINS3-205ENST00000564814 CCDC57Q2TAC2 916 aa9.29□□□□□ -0.92
GINS3-205ENST00000564814 MSL1Q68DK7 614 aa9.29□□□□□ -0.92
GINS3-205ENST00000564814 BICDL1Q6ZP65 573 aa9.29□□□□□ -0.92
GINS3-205ENST00000564814 NLGN2Q8NFZ4 835 aa9.29□□□□□ -0.92
GINS3-205ENST00000564814 CDC5LQ99459 802 aaKnown RBP9.29□□□□□ -0.92
GINS3-205ENST00000564814 ANKRD18BA2A2Z9 1011 aa9.28□□□□□ -0.92
GINS3-205ENST00000564814 EYA2O00167 538 aa9.28□□□□□ -0.92
GINS3-205ENST00000564814 SRGNP10124 158 aa9.28□□□□□ -0.92
GINS3-205ENST00000564814 HCLS1P14317 486 aaPredicted RBP9.28□□□□□ -0.92
GINS3-205ENST00000564814 IL15P40933 162 aaPredicted RBP9.28□□□□□ -0.92
GINS3-205ENST00000564814 NUCB1Q02818 461 aa9.28□□□□□ -0.92
GINS3-205ENST00000564814 FAM161AQ3B820 660 aa9.28□□□□□ -0.92
GINS3-205ENST00000564814 KIF1BPQ96EK5 621 aa9.28□□□□□ -0.92
GINS3-205ENST00000564814 GREM2Q9H772 168 aa9.28□□□□□ -0.92
GINS3-205ENST00000564814 BSDC1Q9NW68 430 aaPredicted RBP9.28□□□□□ -0.92
GINS3-205ENST00000564814 RIPOR2Q9Y4F9 1068 aa9.28□□□□□ -0.92
GINS3-205ENST00000564814 NPR1P16066 1061 aa9.27□□□□□ -0.93
GINS3-205ENST00000564814 HSPA6P17066 643 aa9.27□□□□□ -0.93
GINS3-205ENST00000564814 TGFB2P61812 414 aa9.27□□□□□ -0.93
GINS3-205ENST00000564814 GRAPQ13588 217 aa9.27□□□□□ -0.93
GINS3-205ENST00000564814 STYK1Q6J9G0 422 aa9.27□□□□□ -0.93
GINS3-205ENST00000564814 B4GALNT3Q6L9W6 998 aa9.27□□□□□ -0.93
GINS3-205ENST00000564814 ATG9AQ7Z3C6 839 aa9.27□□□□□ -0.93
GINS3-205ENST00000564814 VGLL2Q8N8G2 317 aa9.27□□□□□ -0.93
GINS3-205ENST00000564814 GRAPLQ8TC17 118 aaPredicted RBP9.27□□□□□ -0.93
GINS3-205ENST00000564814 SALL3Q9BXA9 1300 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms