RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 ZNF496Q96IT1 587 aaPredicted RBP18.39■□□□□ 0.53
GTF3C1-205ENST00000564747 COL15A1P39059 1388 aa18.38■□□□□ 0.53
GTF3C1-205ENST00000564747 TFCP2Q12800 502 aa18.38■□□□□ 0.53
GTF3C1-205ENST00000564747 MTERF4Q7Z6M4 381 aaKnown RBP18.38■□□□□ 0.53
GTF3C1-205ENST00000564747 ALDH8A1Q9H2A2 487 aaPredicted RBP18.38■□□□□ 0.53
GTF3C1-205ENST00000564747 USP16Q9Y5T5 823 aa18.38■□□□□ 0.53
GTF3C1-205ENST00000564747 ANKRD13DQ6ZTN6 518 aa18.38■□□□□ 0.53
GTF3C1-205ENST00000564747 RAPGEF4Q8WZA2 1011 aa18.38■□□□□ 0.53
GTF3C1-205ENST00000564747 NPHP3Q7Z494 1330 aa18.37■□□□□ 0.53
GTF3C1-205ENST00000564747 PTPN12Q05209 780 aaKnown RBP18.37■□□□□ 0.53
GTF3C1-205ENST00000564747 TSGA10IPQ3SY00 556 aa18.37■□□□□ 0.53
GTF3C1-205ENST00000564747 NLRP2Q9NX02 1062 aa18.37■□□□□ 0.53
GTF3C1-205ENST00000564747 RFX5P48382 616 aaPredicted RBP18.37■□□□□ 0.53
GTF3C1-205ENST00000564747 COPRSQ9NQ92 184 aa18.37■□□□□ 0.53
GTF3C1-205ENST00000564747 HMG20BQ9P0W2 317 aa18.37■□□□□ 0.53
GTF3C1-205ENST00000564747 ELP1O95163 1332 aa18.37■□□□□ 0.53
GTF3C1-205ENST00000564747 ATP5JP18859 108 aa18.36■□□□□ 0.53
GTF3C1-205ENST00000564747 TNNI3KQ59H18 835 aa18.36■□□□□ 0.53
GTF3C1-205ENST00000564747 CCDC129Q6ZRS4 1044 aa18.36■□□□□ 0.53
GTF3C1-205ENST00000564747 KLHL34Q8N239 644 aa18.36■□□□□ 0.53
GTF3C1-205ENST00000564747 SPC24Q8NBT2 197 aa18.36■□□□□ 0.53
GTF3C1-205ENST00000564747 SEC62Q99442 399 aaKnown RBP18.36■□□□□ 0.53
GTF3C1-205ENST00000564747 NUP62CLQ9H1M0 184 aa18.36■□□□□ 0.53
GTF3C1-205ENST00000564747 FPGT-TNNI3KV9GXZ4 949 aa18.36■□□□□ 0.53
GTF3C1-205ENST00000564747 KDM6AO15550 1401 aaPredicted RBP18.36■□□□□ 0.53
GTF3C1-205ENST00000564747 JCADQ9P266 1359 aa18.36■□□□□ 0.53
GTF3C1-205ENST00000564747 JAK2O60674 1132 aa18.36■□□□□ 0.53
GTF3C1-205ENST00000564747 PDIA4P13667 645 aaKnown RBP18.36■□□□□ 0.53
GTF3C1-205ENST00000564747 MAP3K11Q16584 847 aa18.36■□□□□ 0.53
GTF3C1-205ENST00000564747 USPL1Q5W0Q7 1092 aa18.36■□□□□ 0.53
GTF3C1-205ENST00000564747 CKAP2LQ8IYA6 745 aa18.36■□□□□ 0.53
GTF3C1-205ENST00000564747 SPATA32Q96LK8 384 aa18.36■□□□□ 0.53
GTF3C1-205ENST00000564747 DACT1Q9NYF0 836 aa18.36■□□□□ 0.53
GTF3C1-205ENST00000564747 RGPD5Q99666 1765 aa18.36■□□□□ 0.53
GTF3C1-205ENST00000564747 PHKG2P15735 406 aa18.36■□□□□ 0.53
GTF3C1-205ENST00000564747 UBE3BQ7Z3V4 1068 aa18.36■□□□□ 0.53
GTF3C1-205ENST00000564747 LRP10Q7Z4F1 713 aa18.36■□□□□ 0.53
GTF3C1-205ENST00000564747 ATP5J2-PTCD1G3V325 749 aa18.35■□□□□ 0.53
GTF3C1-205ENST00000564747 PTCD1O75127 700 aaKnown RBP18.35■□□□□ 0.53
GTF3C1-205ENST00000564747 DNAJC2Q99543 621 aaKnown RBP18.35■□□□□ 0.53
GTF3C1-205ENST00000564747 MRVI1Q9Y6F6 885 aa18.35■□□□□ 0.53
GTF3C1-205ENST00000564747 NEK1Q96PY6 1258 aa18.35■□□□□ 0.53
GTF3C1-205ENST00000564747 SCAND2PQ9GZW5 306 aaPredicted RBP18.35■□□□□ 0.53
GTF3C1-205ENST00000564747 KCNF1Q9H3M0 494 aa18.35■□□□□ 0.53
GTF3C1-205ENST00000564747 C5P01031 1676 aa18.34■□□□□ 0.53
GTF3C1-205ENST00000564747 GOLGA6L4A6NEF3 574 aa18.34■□□□□ 0.53
GTF3C1-205ENST00000564747 TYRO3Q06418 890 aa18.34■□□□□ 0.53
GTF3C1-205ENST00000564747 LEO1Q8WVC0 666 aaPredicted RBP18.34■□□□□ 0.53
GTF3C1-205ENST00000564747 DBNDD2Q9BQY9 259 aa18.34■□□□□ 0.53
GTF3C1-205ENST00000564747 LUZP1Q86V48 1076 aa18.34■□□□□ 0.53
GTF3C1-205ENST00000564747 MYRIPQ8NFW9 859 aa18.34■□□□□ 0.53
GTF3C1-205ENST00000564747 FAM200AQ8TCP9 573 aa18.34■□□□□ 0.53
GTF3C1-205ENST00000564747 CCDC9Q9Y3X0 531 aaKnown RBP18.34■□□□□ 0.53
GTF3C1-205ENST00000564747 MRC1P22897 1456 aa18.34■□□□□ 0.53
GTF3C1-205ENST00000564747 ADAMTS7Q9UKP4 1686 aa18.34■□□□□ 0.53
GTF3C1-205ENST00000564747 CAMTA1Q9Y6Y1 1673 aa18.34■□□□□ 0.53
GTF3C1-205ENST00000564747 SPTLC3Q9NUV7 552 aa18.33■□□□□ 0.53
GTF3C1-205ENST00000564747 Q6ZUG5 572 aa18.33■□□□□ 0.52
GTF3C1-205ENST00000564747 GTF3C6Q969F1 213 aa18.33■□□□□ 0.52
GTF3C1-205ENST00000564747 DDX11Q96FC9 970 aa18.33■□□□□ 0.52
GTF3C1-205ENST00000564747 LRRC2Q9BYS8 371 aa18.33■□□□□ 0.52
GTF3C1-205ENST00000564747 TNMDQ9H2S6 317 aa18.33■□□□□ 0.52
GTF3C1-205ENST00000564747 PYCARDQ9ULZ3 195 aa18.33■□□□□ 0.52
GTF3C1-205ENST00000564747 CYP21A2P08686 494 aa18.32■□□□□ 0.52
GTF3C1-205ENST00000564747 SNRPA1P09661 255 aaKnown RBP18.32■□□□□ 0.52
GTF3C1-205ENST00000564747 TATP17735 454 aaPredicted RBP18.32■□□□□ 0.52
GTF3C1-205ENST00000564747 KRT32Q14532 448 aa18.32■□□□□ 0.52
GTF3C1-205ENST00000564747 DDX46Q7L014 1031 aaKnown RBP18.32■□□□□ 0.52
GTF3C1-205ENST00000564747 TSC1Q92574 1164 aa18.32■□□□□ 0.52
GTF3C1-205ENST00000564747 ZNF609O15014 1411 aa18.32■□□□□ 0.52
GTF3C1-205ENST00000564747 A0A087WZG4 1122 aa18.32■□□□□ 0.52
GTF3C1-205ENST00000564747 BRF1Q92994 677 aa18.31■□□□□ 0.52
GTF3C1-205ENST00000564747 PGBD1Q96JS3 809 aa18.31■□□□□ 0.52
GTF3C1-205ENST00000564747 NR1I2O75469 434 aa18.31■□□□□ 0.52
GTF3C1-205ENST00000564747 RABL6Q3YEC7 729 aaPredicted RBP18.31■□□□□ 0.52
GTF3C1-205ENST00000564747 TTC5Q8N0Z6 440 aa18.31■□□□□ 0.52
GTF3C1-205ENST00000564747 KIAA1524Q8TCG1 905 aa18.31■□□□□ 0.52
GTF3C1-205ENST00000564747 ARID3AQ99856 593 aa18.31■□□□□ 0.52
GTF3C1-205ENST00000564747 HSP90B1P14625 803 aaKnown RBP18.3■□□□□ 0.52
GTF3C1-205ENST00000564747 MCMDC2Q4G0Z9 681 aa18.3■□□□□ 0.52
GTF3C1-205ENST00000564747 ANO6Q4KMQ2 910 aa18.3■□□□□ 0.52
GTF3C1-205ENST00000564747 IFNL2Q8IZJ0 200 aa18.3■□□□□ 0.52
GTF3C1-205ENST00000564747 PRIMPOLQ96LW4 560 aa18.3■□□□□ 0.52
GTF3C1-205ENST00000564747 SLFNL1Q499Z3 407 aa18.3■□□□□ 0.52
GTF3C1-205ENST00000564747 HAUS7Q99871 368 aa18.3■□□□□ 0.52
GTF3C1-205ENST00000564747 CBX8Q9HC52 389 aa18.3■□□□□ 0.52
GTF3C1-205ENST00000564747 U3KPZ7 1027 aaPredicted RBP18.3■□□□□ 0.52
GTF3C1-205ENST00000564747 DDX17Q92841 729 aaKnown RBP18.29■□□□□ 0.52
GTF3C1-205ENST00000564747 LMTK3Q96Q04 1460 aa18.29■□□□□ 0.52
GTF3C1-205ENST00000564747 TRPM3Q9HCF6 1732 aaPredicted RBP18.29■□□□□ 0.52
GTF3C1-205ENST00000564747 SCN11AQ9UI33 1791 aa18.29■□□□□ 0.52
GTF3C1-205ENST00000564747 CYP27B1O15528 508 aa18.29■□□□□ 0.52
GTF3C1-205ENST00000564747 RESTQ13127 1097 aa18.29■□□□□ 0.52
GTF3C1-205ENST00000564747 LMBR1LQ6UX01 489 aa18.29■□□□□ 0.52
GTF3C1-205ENST00000564747 PROSER2Q86WR7 435 aaPredicted RBP18.29■□□□□ 0.52
GTF3C1-205ENST00000564747 BICD2Q8TD16 824 aa18.29■□□□□ 0.52
GTF3C1-205ENST00000564747 CLSTN2Q9H4D0 955 aa18.29■□□□□ 0.52
GTF3C1-205ENST00000564747 DDX19AQ9NUU7 478 aaKnown RBP18.29■□□□□ 0.52
GTF3C1-205ENST00000564747 MEGF6O75095 1541 aa18.29■□□□□ 0.52
GTF3C1-205ENST00000564747 H3BQV1 296 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms