RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 TREML1Q86YW5 311 aa9□□□□□ -0.97
CHD9-212ENST00000564641 TRPM4Q8TD43 1214 aa9□□□□□ -0.97
CHD9-212ENST00000564641 STK32AQ8WU08 396 aa9□□□□□ -0.97
CHD9-212ENST00000564641 FRRS1LQ9P0K9 344 aa9□□□□□ -0.97
CHD9-212ENST00000564641 RTCBQ9Y3I0 505 aaKnown RBP9□□□□□ -0.97
CHD9-212ENST00000564641 OPLAHO14841 1288 aa8.99□□□□□ -0.97
CHD9-212ENST00000564641 GRNP28799 593 aaKnown RBP8.99□□□□□ -0.97
CHD9-212ENST00000564641 RAC1P63000 192 aa8.99□□□□□ -0.97
CHD9-212ENST00000564641 PSAPL1Q6NUJ1 521 aa8.99□□□□□ -0.97
CHD9-212ENST00000564641 FAM35AQ86V20 835 aa8.99□□□□□ -0.97
CHD9-212ENST00000564641 FAM13BQ9NYF5 915 aa8.99□□□□□ -0.97
CHD9-212ENST00000564641 CXXC1Q9P0U4 656 aaPredicted RBP8.99□□□□□ -0.97
CHD9-212ENST00000564641 CLP1Q92989 425 aaKnown RBP8.98□□□□□ -0.97
CHD9-212ENST00000564641 GTF3C3Q9Y5Q9 886 aa8.98□□□□□ -0.97
CHD9-212ENST00000564641 C9orf172C9J069 976 aa8.97□□□□□ -0.97
CHD9-212ENST00000564641 XYLBO75191 536 aa8.97□□□□□ -0.97
CHD9-212ENST00000564641 ELNP15502 786 aa8.97□□□□□ -0.97
CHD9-212ENST00000564641 TARSP26639 723 aaKnown RBP8.97□□□□□ -0.97
CHD9-212ENST00000564641 AFF1P51825 1210 aaKnown RBP8.97□□□□□ -0.97
CHD9-212ENST00000564641 GPLD1P80108 840 aa8.97□□□□□ -0.97
CHD9-212ENST00000564641 TMEM164Q5U3C3 297 aa8.97□□□□□ -0.97
CHD9-212ENST00000564641 KRT25Q7Z3Z0 450 aa8.97□□□□□ -0.97
CHD9-212ENST00000564641 NUDT8Q8WV74 236 aa8.97□□□□□ -0.97
CHD9-212ENST00000564641 TTC9Q92623 222 aa8.97□□□□□ -0.97
CHD9-212ENST00000564641 ZFATQ9P243 1243 aa8.97□□□□□ -0.97
CHD9-212ENST00000564641 SASH3O75995 380 aa8.96□□□□□ -0.98
CHD9-212ENST00000564641 NRLP54845 237 aa8.96□□□□□ -0.98
CHD9-212ENST00000564641 RGL4Q8IZJ4 473 aa8.96□□□□□ -0.98
CHD9-212ENST00000564641 NAGPAQ9UK23 515 aa8.96□□□□□ -0.98
CHD9-212ENST00000564641 A0A0A0MRY4 1105 aa8.95□□□□□ -0.98
CHD9-212ENST00000564641 FURINP09958 794 aa8.95□□□□□ -0.98
CHD9-212ENST00000564641 NRG1Q02297 640 aaPredicted RBP8.95□□□□□ -0.98
CHD9-212ENST00000564641 ELMSAN1Q6PJG2 1045 aa8.95□□□□□ -0.98
CHD9-212ENST00000564641 CMTR1Q8N1G2 835 aaKnown RBP8.95□□□□□ -0.98
CHD9-212ENST00000564641 DTWD1Q8N5C7 304 aa8.95□□□□□ -0.98
CHD9-212ENST00000564641 TLR7Q9NYK1 1049 aaKnown RBP8.95□□□□□ -0.98
CHD9-212ENST00000564641 FAM229AH3BQW9 127 aa8.94□□□□□ -0.98
CHD9-212ENST00000564641 PSAPP07602 524 aa8.94□□□□□ -0.98
CHD9-212ENST00000564641 CPB1P15086 417 aa8.94□□□□□ -0.98
CHD9-212ENST00000564641 SOX18P35713 384 aa8.94□□□□□ -0.98
CHD9-212ENST00000564641 PIK3R5Q8WYR1 880 aa8.94□□□□□ -0.98
CHD9-212ENST00000564641 PLAURQ03405 335 aa8.93□□□□□ -0.98
CHD9-212ENST00000564641 PERM1Q5SV97 790 aa8.93□□□□□ -0.98
CHD9-212ENST00000564641 MSL1Q68DK7 614 aa8.93□□□□□ -0.98
CHD9-212ENST00000564641 ETFBKMTQ8IXQ9 262 aa8.93□□□□□ -0.98
CHD9-212ENST00000564641 LPIN3Q9BQK8 851 aa8.93□□□□□ -0.98
CHD9-212ENST00000564641 KCNMB2Q9Y691 235 aa8.93□□□□□ -0.98
CHD9-212ENST00000564641 ZBTB42B2RXF5 422 aa8.92□□□□□ -0.98
CHD9-212ENST00000564641 HOXD8P13378 290 aaPredicted RBP8.92□□□□□ -0.98
CHD9-212ENST00000564641 GRIK4Q16099 956 aa8.92□□□□□ -0.98
CHD9-212ENST00000564641 ILDR2Q71H61 639 aa8.92□□□□□ -0.98
CHD9-212ENST00000564641 ABTB2Q8N961 1025 aa8.92□□□□□ -0.98
CHD9-212ENST00000564641 LENG1Q96BZ8 264 aaPredicted RBP8.92□□□□□ -0.98
CHD9-212ENST00000564641 SAP130Q9H0E3 1048 aa8.92□□□□□ -0.98
CHD9-212ENST00000564641 RBSNQ9H1K0 784 aa8.92□□□□□ -0.98
CHD9-212ENST00000564641 FNDC3AQ9Y2H6 1198 aaKnown RBP8.92□□□□□ -0.98
CHD9-212ENST00000564641 DOC2BQ14184 412 aa8.91□□□□□ -0.98
CHD9-212ENST00000564641 NLRP13Q86W25 1043 aa8.91□□□□□ -0.98
CHD9-212ENST00000564641 FMR1NBQ8N0W7 255 aaPredicted RBP8.91□□□□□ -0.98
CHD9-212ENST00000564641 MKNK1Q9BUB5 465 aa8.91□□□□□ -0.98
CHD9-212ENST00000564641 STIM2Q9P246 746 aa8.91□□□□□ -0.98
CHD9-212ENST00000564641 PPP1R15AO75807 674 aaPredicted RBP8.9□□□□□ -0.98
CHD9-212ENST00000564641 WFDC8Q8IUA0 241 aa8.9□□□□□ -0.98
CHD9-212ENST00000564641 DMRTC2Q8IXT2 367 aaPredicted RBP8.9□□□□□ -0.98
CHD9-212ENST00000564641 USP20Q9Y2K6 914 aa8.9□□□□□ -0.98
CHD9-212ENST00000564641 LOC102724428A0A0B4J2F2 783 aa8.89□□□□□ -0.99
CHD9-212ENST00000564641 TNFRSF10BO14763 440 aa8.89□□□□□ -0.99
CHD9-212ENST00000564641 EIF2AK2P19525 551 aaKnown RBP8.89□□□□□ -0.99
CHD9-212ENST00000564641 ATP2B4P23634 1241 aa8.89□□□□□ -0.99
CHD9-212ENST00000564641 SIK1P57059 783 aa8.89□□□□□ -0.99
CHD9-212ENST00000564641 MLLT1Q03111 559 aaPredicted RBP8.89□□□□□ -0.99
CHD9-212ENST00000564641 ADGRE1Q14246 886 aa8.89□□□□□ -0.99
CHD9-212ENST00000564641 NAA30Q147X3 362 aaPredicted RBP8.89□□□□□ -0.99
CHD9-212ENST00000564641 GRIK5Q16478 980 aa8.89□□□□□ -0.99
CHD9-212ENST00000564641 CACTIN-AS1Q8N1I8 211 aa8.89□□□□□ -0.99
CHD9-212ENST00000564641 DCAF11Q8TEB1 546 aa8.89□□□□□ -0.99
CHD9-212ENST00000564641 UBAP1LF5GYI3 381 aa8.88□□□□□ -0.99
CHD9-212ENST00000564641 MMP20O60882 483 aa8.88□□□□□ -0.99
CHD9-212ENST00000564641 GHRHP01286 108 aa8.88□□□□□ -0.99
CHD9-212ENST00000564641 ZAP70P43403 619 aa8.88□□□□□ -0.99
CHD9-212ENST00000564641 SMG9Q9H0W8 520 aaKnown RBP8.88□□□□□ -0.99
CHD9-212ENST00000564641 SELPP16109 830 aa8.87□□□□□ -0.99
CHD9-212ENST00000564641 TXNRD3Q86VQ6 643 aa8.87□□□□□ -0.99
CHD9-212ENST00000564641 FBXO11Q86XK2 927 aa8.87□□□□□ -0.99
CHD9-212ENST00000564641 SEMA6BQ9H3T3 888 aa8.87□□□□□ -0.99
CHD9-212ENST00000564641 ARID3CA6NKF2 412 aa8.86□□□□□ -0.99
CHD9-212ENST00000564641 RPLP1P05386 114 aaKnown RBP8.86□□□□□ -0.99
CHD9-212ENST00000564641 MBTPS1Q14703 1052 aa8.86□□□□□ -0.99
CHD9-212ENST00000564641 CAPN12Q6ZSI9 719 aa8.86□□□□□ -0.99
CHD9-212ENST00000564641 HFE2Q6ZVN8 426 aa8.86□□□□□ -0.99
CHD9-212ENST00000564641 PLD4Q96BZ4 506 aa8.86□□□□□ -0.99
CHD9-212ENST00000564641 SRA1Q9HD15 236 aaKnown RBP8.86□□□□□ -0.99
CHD9-212ENST00000564641 TPSG1Q9NRR2 321 aa8.86□□□□□ -0.99
CHD9-212ENST00000564641 USP21Q9UK80 565 aa8.86□□□□□ -0.99
CHD9-212ENST00000564641 TRIP4Q15650 581 aaPredicted RBP8.85□□□□□ -0.99
CHD9-212ENST00000564641 NKAPLQ5M9Q1 402 aa8.85□□□□□ -0.99
CHD9-212ENST00000564641 IGF2-ASQ6U949 168 aa8.85□□□□□ -0.99
CHD9-212ENST00000564641 MAP4K3Q8IVH8 894 aa8.85□□□□□ -0.99
CHD9-212ENST00000564641 OR13H1Q8NG92 308 aa8.85□□□□□ -0.99
CHD9-212ENST00000564641 RSPO4Q2I0M5 234 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms