RNA–Protein interactions for RNA: ENST00000564594.1

HMGN2P46-206, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 46, human

TSL 4

Gene HMGN2P46, Length 572 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN2P46-206	ENST00000564594	ECE1	P42892	770 aa		13.78	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	CYP4F22	Q6NT55	531 aa		13.78	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	SP8	Q8IXZ3	490 aa		13.78	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	SUPT20H	Q8NEM7	779 aa		13.78	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	ABHD8	Q96I13	439 aa		13.78	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	GPR101	Q96P66	508 aa	Predicted RBP	13.78	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	TMX4	Q9H1E5	349 aa	Predicted RBP	13.78	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	PGAP2	Q9UHJ9	254 aa		13.78	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	HCLS1	P14317	486 aa	Predicted RBP	13.77	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	GMPS	P49915	693 aa	Predicted RBP	13.77	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	RIPK4	P57078	832 aa		13.77	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	KIAA2012	Q0VF49	1180 aa		13.77	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	HSP90AB3P	Q58FF7	597 aa		13.77	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	CDHR2	Q9BYE9	1310 aa		13.77	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	LAMB2	P55268	1798 aa		13.76	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	ANKRD36C	Q5JPF3	1778 aa		13.76	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	TMPO	P42166	694 aa	Known RBP	13.76	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	CIAPIN1	Q6FI81	312 aa		13.76	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	DPP8	Q6V1X1	898 aa	Predicted RBP	13.76	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	COPS6	Q7L5N1	327 aa		13.76	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	SAPCD2	Q86UD0	394 aa		13.76	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	MPND	Q8N594	471 aa		13.76	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	XAGE3	Q8WTP9	111 aa		13.76	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	DUOX1	Q9NRD9	1551 aa		13.75	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	SH3TC1	Q8TE82	1336 aa		13.75	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	MAP2K2	P36507	400 aa		13.75	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	HIRA	P54198	1017 aa	Predicted RBP	13.75	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	TCIRG1	Q13488	830 aa		13.75	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	GRAP	Q13588	217 aa		13.75	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	GRAPL	Q8TC17	118 aa	Predicted RBP	13.75	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	ZC3H15	Q8WU90	426 aa	Known RBP	13.75	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	HHIPL1	Q96JK4	782 aa		13.75	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.75	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	YDJC	A8MPS7	323 aa		13.74	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	CHL1	O00533	1208 aa		13.74	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	AOC2	O75106	756 aa		13.74	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	RAD17	O75943	681 aa		13.74	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	CELF2	O95319	508 aa	Known RBP	13.74	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	LMOD3	Q0VAK6	560 aa		13.74	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	TNIP1	Q15025	636 aa		13.74	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.74	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	DDX46	Q7L014	1031 aa	Known RBP	13.74	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	TRPM4	Q8TD43	1214 aa		13.74	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	TRMT112	Q9UI30	125 aa	Known RBP	13.74	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	LRRC37A	A6NMS7	1700 aa		13.73	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	AIMP1	Q12904	312 aa	Known RBP	13.73	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	GRM1	Q13255	1194 aa		13.73	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	KRT24	Q2M2I5	525 aa		13.73	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	TMC4	Q7Z404	712 aa		13.73	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	NECTIN2	Q92692	538 aa		13.73	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	BEGAIN	Q9BUH8	593 aa		13.73	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	TAF1	P21675	1872 aa		13.72	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	SHTN1	A0MZ66	631 aa		13.72	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	BCL2L13	Q9BXK5	485 aa		13.72	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	RALBP1	Q15311	655 aa		13.71	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	ISCA1	Q9BUE6	129 aa		13.71	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	CHPF2	Q9P2E5	772 aa		13.71	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	CNOT7	Q9UIV1	285 aa	Known RBP	13.71	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	TSKS	Q9UJT2	592 aa		13.71	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	PDE4DIP	Q5VU43	2346 aa		13.71	□□□□□ -0.21
HMGN2P46-206	ENST00000564594	DDX60	Q8IY21	1712 aa	Known RBP	13.7	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	CA12	O43570	354 aa		13.7	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	BRPF1	P55201	1214 aa	Predicted RBP	13.7	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	SF3B3	Q15393	1217 aa	Known RBP	13.7	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	CDC37L1	Q7L3B6	337 aa		13.7	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	MICALL2	Q8IY33	904 aa		13.7	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	PLBD2	Q8NHP8	589 aa		13.7	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	DPF2	Q92785	391 aa		13.7	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	TRIM35	Q9UPQ4	493 aa		13.7	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	HOXB7	P09629	217 aa		13.69	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	RGS19	P49795	217 aa		13.69	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	FAM161A	Q3B820	660 aa		13.69	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	CELF1	Q92879	486 aa	Known RBP	13.69	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.69	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	COL4A1	P02462	1669 aa		13.69	□□□□□ -0.22
HMGN2P46-206	ENST00000564594		H7C1D1	291 aa		13.68	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	PSMD14	O00487	310 aa		13.68	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	TRIM28	Q13263	835 aa	Known RBP	13.68	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	WASHC4	Q2M389	1173 aa		13.68	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	HDGFL1	Q5TGJ6	251 aa		13.68	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	ANKRD13D	Q6ZTN6	518 aa		13.68	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	ZNF428	Q96B54	188 aa		13.68	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	FAM89A	Q96GI7	184 aa		13.68	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	POLL	Q9UGP5	575 aa		13.68	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	CASP8AP2	Q9UKL3	1982 aa		13.68	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	EGFR	P00533	1210 aa		13.67	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	GPSM2	P81274	684 aa		13.67	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	NEUROD2	Q15784	382 aa		13.67	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	DLK2	Q6UY11	383 aa		13.67	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	SAMD7	Q7Z3H4	446 aa		13.67	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	USP48	Q86UV5	1035 aa		13.67	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	CCDC146	Q8IYE0	955 aa		13.67	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	ZIC5	Q96T25	663 aa		13.67	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	ZNF408	Q9H9D4	720 aa		13.67	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	DBNDD1	Q9H9R9	158 aa		13.67	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	DBF4	Q9UBU7	674 aa	Predicted RBP	13.67	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.67	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	RTL9	Q8NET4	1388 aa		13.67	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	CCDC85C	A6NKD9	419 aa		13.66	□□□□□ -0.22
HMGN2P46-206	ENST00000564594	ATP5J2-PTCD1	G3V325	749 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms