RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 CTSWP56202 376 aa15.7■□□□□ 0.1
KARS-204ENST00000564578 COL11A2P13942 1736 aaPredicted RBP15.7■□□□□ 0.1
KARS-204ENST00000564578 UBTFL1P0CB47 393 aaPredicted RBP15.69■□□□□ 0.1
KARS-204ENST00000564578 PDZRN3Q9UPQ7 1066 aa15.69■□□□□ 0.1
KARS-204ENST00000564578 LAMB2P55268 1798 aa15.69■□□□□ 0.1
KARS-204ENST00000564578 HSP90B1P14625 803 aaKnown RBP15.68■□□□□ 0.1
KARS-204ENST00000564578 MASTLQ96GX5 879 aa15.68■□□□□ 0.1
KARS-204ENST00000564578 CCDC85AQ96PX6 553 aaPredicted RBP15.68■□□□□ 0.1
KARS-204ENST00000564578 BICC1Q9H694 974 aaKnown RBP15.68■□□□□ 0.1
KARS-204ENST00000564578 GNAI3P08754 354 aa15.68■□□□□ 0.1
KARS-204ENST00000564578 NPR1P16066 1061 aa15.68■□□□□ 0.1
KARS-204ENST00000564578 RABL6Q3YEC7 729 aaPredicted RBP15.68■□□□□ 0.1
KARS-204ENST00000564578 ANKRD44Q8N8A2 993 aa15.68■□□□□ 0.1
KARS-204ENST00000564578 WWC3Q9ULE0 1092 aa15.68■□□□□ 0.1
KARS-204ENST00000564578 STYK1Q6J9G0 422 aa15.67■□□□□ 0.1
KARS-204ENST00000564578 LMBR1LQ6UX01 489 aa15.67■□□□□ 0.1
KARS-204ENST00000564578 ZNF622Q969S3 477 aaKnown RBP eCLIP15.67■□□□□ 0.1
KARS-204ENST00000564578 GREM2Q9H772 168 aa15.67■□□□□ 0.1
KARS-204ENST00000564578 LRRFIP2Q9Y608 721 aaKnown RBP15.67■□□□□ 0.1
KARS-204ENST00000564578 COL4A1P02462 1669 aa15.66■□□□□ 0.1
KARS-204ENST00000564578 RPGRQ92834 1020 aaKnown RBP15.66■□□□□ 0.1
KARS-204ENST00000564578 SEC31BQ9NQW1 1179 aa15.66■□□□□ 0.1
KARS-204ENST00000564578 ZBTB40Q9NUA8 1239 aa15.66■□□□□ 0.1
KARS-204ENST00000564578 PIM2Q9P1W9 311 aa15.66■□□□□ 0.1
KARS-204ENST00000564578 DDX19BQ9UMR2 479 aa15.66■□□□□ 0.1
KARS-204ENST00000564578 CCDC152Q4G0S7 254 aa15.66■□□□□ 0.1
KARS-204ENST00000564578 CRAMP1Q96RY5 1269 aa15.66■□□□□ 0.1
KARS-204ENST00000564578 DLEC1Q9Y238 1755 aa15.65■□□□□ 0.1
KARS-204ENST00000564578 BRCA1P38398 1863 aaKnown RBP15.65■□□□□ 0.1
KARS-204ENST00000564578 FAM161AQ3B820 660 aa15.65■□□□□ 0.1
KARS-204ENST00000564578 RTL9Q8NET4 1388 aa15.65■□□□□ 0.1
KARS-204ENST00000564578 MYH3P11055 1940 aa15.65■□□□□ 0.1
KARS-204ENST00000564578 TAF1P21675 1872 aa15.65■□□□□ 0.1
KARS-204ENST00000564578 GNAI2P04899 355 aa15.64■□□□□ 0.09
KARS-204ENST00000564578 SLC51AQ86UW1 340 aa15.64■□□□□ 0.09
KARS-204ENST00000564578 TTLL6Q8N841 843 aa15.64■□□□□ 0.09
KARS-204ENST00000564578 CELF1Q92879 486 aaKnown RBP15.64■□□□□ 0.09
KARS-204ENST00000564578 RBM17Q96I25 401 aaKnown RBP15.64■□□□□ 0.09
KARS-204ENST00000564578 C1orf115Q9H7X2 142 aa15.64■□□□□ 0.09
KARS-204ENST00000564578 CENPBP07199 599 aaPredicted RBP15.64■□□□□ 0.09
KARS-204ENST00000564578 ITGA6P23229 1130 aa15.64■□□□□ 0.09
KARS-204ENST00000564578 ALDH1B1P30837 517 aa15.64■□□□□ 0.09
KARS-204ENST00000564578 PRPF40BQ6NWY9 871 aaKnown RBP15.64■□□□□ 0.09
KARS-204ENST00000564578 DDX46Q7L014 1031 aaKnown RBP15.64■□□□□ 0.09
KARS-204ENST00000564578 C7orf43Q8WVR3 580 aa15.64■□□□□ 0.09
KARS-204ENST00000564578 CNKSR1Q969H4 720 aa15.64■□□□□ 0.09
KARS-204ENST00000564578 CRBNQ96SW2 442 aa15.64■□□□□ 0.09
KARS-204ENST00000564578 SLX4Q8IY92 1834 aa15.63■□□□□ 0.09
KARS-204ENST00000564578 GRAPQ13588 217 aa15.62■□□□□ 0.09
KARS-204ENST00000564578 DALRD3Q5D0E6 543 aaKnown RBP15.62■□□□□ 0.09
KARS-204ENST00000564578 GRAPLQ8TC17 118 aaPredicted RBP15.62■□□□□ 0.09
KARS-204ENST00000564578 HDAC5Q9UQL6 1122 aa15.62■□□□□ 0.09
KARS-204ENST00000564578 YBX3P16989 372 aaKnown RBP eCLIP15.62■□□□□ 0.095e-8■■□□□ 14.4
KARS-204ENST00000564578 RPS8P62241 208 aaKnown RBP15.62■□□□□ 0.09
KARS-204ENST00000564578 MTX1Q13505 466 aa15.62■□□□□ 0.09
KARS-204ENST00000564578 OLFM4Q6UX06 510 aa15.62■□□□□ 0.09
KARS-204ENST00000564578 BCS1LQ9Y276 419 aa15.62■□□□□ 0.09
KARS-204ENST00000564578 BBOX1O75936 387 aa15.61■□□□□ 0.09
KARS-204ENST00000564578 IFIT5Q13325 482 aaKnown RBP15.61■□□□□ 0.09
KARS-204ENST00000564578 CHMP3Q9Y3E7 222 aa15.61■□□□□ 0.09
KARS-204ENST00000564578 PNMA6EA0A0J9YXQ4 647 aa15.6■□□□□ 0.09
KARS-204ENST00000564578 RFX5P48382 616 aaPredicted RBP15.6■□□□□ 0.09
KARS-204ENST00000564578 IRX6P78412 446 aaPredicted RBP15.6■□□□□ 0.09
KARS-204ENST00000564578 CCDC57Q2TAC2 916 aa15.6■□□□□ 0.09
KARS-204ENST00000564578 ZNF594Q96JF6 807 aaPredicted RBP15.6■□□□□ 0.09
KARS-204ENST00000564578 ANKRD18BA2A2Z9 1011 aa15.59■□□□□ 0.09
KARS-204ENST00000564578 C21orf2O43822 256 aa15.59■□□□□ 0.09
KARS-204ENST00000564578 CEP85Q6P2H3 762 aa15.59■□□□□ 0.09
KARS-204ENST00000564578 KLHDC4Q8TBB5 520 aa15.59■□□□□ 0.09
KARS-204ENST00000564578 CDC5LQ99459 802 aaKnown RBP15.59■□□□□ 0.09
KARS-204ENST00000564578 PPEF1O14829 653 aaPredicted RBP15.58■□□□□ 0.09
KARS-204ENST00000564578 SRGAP3O43295 1099 aa15.58■□□□□ 0.09
KARS-204ENST00000564578 ATP8B2P98198 1209 aa15.58■□□□□ 0.09
KARS-204ENST00000564578 PTPN12Q05209 780 aaKnown RBP15.58■□□□□ 0.09
KARS-204ENST00000564578 ANKRD18AQ8IVF6 992 aa15.58■□□□□ 0.09
KARS-204ENST00000564578 SIRT2Q8IXJ6 389 aa15.58■□□□□ 0.09
KARS-204ENST00000564578 EXOC6Q8TAG9 804 aa15.58■□□□□ 0.09
KARS-204ENST00000564578 CHMP4BQ9H444 224 aaKnown RBP15.58■□□□□ 0.09
KARS-204ENST00000564578 ZNF219Q9P2Y4 722 aaPredicted RBP15.58■□□□□ 0.09
KARS-204ENST00000564578 ATP6V0A2Q9Y487 856 aa15.58■□□□□ 0.09
KARS-204ENST00000564578 SNED1Q8TER0 1413 aa15.58■□□□□ 0.08
KARS-204ENST00000564578 BSDC1Q9NW68 430 aaPredicted RBP15.58■□□□□ 0.08
KARS-204ENST00000564578 CACNA1SQ13698 1873 aa15.57■□□□□ 0.08
KARS-204ENST00000564578 SP8Q8IXZ3 490 aa15.57■□□□□ 0.08
KARS-204ENST00000564578 PUS3Q9BZE2 481 aaKnown RBP15.57■□□□□ 0.08
KARS-204ENST00000564578 POLA2Q14181 598 aa15.56■□□□□ 0.08
KARS-204ENST00000564578 SSH3Q8TE77 659 aa15.56■□□□□ 0.08
KARS-204ENST00000564578 IGHMBP2P38935 993 aaKnown RBP15.56■□□□□ 0.08
KARS-204ENST00000564578 GPR162Q16538 588 aa15.56■□□□□ 0.08
KARS-204ENST00000564578 LDHAL6AQ6ZMR3 332 aa15.56■□□□□ 0.08
KARS-204ENST00000564578 TMC4Q7Z404 712 aa15.56■□□□□ 0.08
KARS-204ENST00000564578 MINPP1Q9UNW1 487 aa15.56■□□□□ 0.08
KARS-204ENST00000564578 PA2G4Q9UQ80 394 aaKnown RBP15.56■□□□□ 0.08
KARS-204ENST00000564578 PCDHB15Q9Y5E8 787 aa15.56■□□□□ 0.08
KARS-204ENST00000564578 ARFGEF1Q9Y6D6 1849 aa15.55■□□□□ 0.08
KARS-204ENST00000564578 RPAP2Q8IXW5 612 aaPredicted RBP15.55■□□□□ 0.08
KARS-204ENST00000564578 MPHOSPH8Q99549 860 aa15.55■□□□□ 0.08
KARS-204ENST00000564578 COPRSQ9NQ92 184 aa15.55■□□□□ 0.08
KARS-204ENST00000564578 RIPOR2Q9Y4F9 1068 aa15.55■□□□□ 0.08
KARS-204ENST00000564578 LRRC24Q50LG9 513 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms