RNA–Protein interactions for RNA: ENST00000564476.1

SPNS1-206, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 3

Gene SPNS1, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-206ENST00000564476 EPHA10Q5JZY3 1008 aa23.42■■□□□ 1.34
SPNS1-206ENST00000564476 TTLL11Q8NHH1 800 aa23.42■■□□□ 1.34
SPNS1-206ENST00000564476 SSH3Q8TE77 659 aa23.42■■□□□ 1.34
SPNS1-206ENST00000564476 BRIP1Q9BX63 1249 aa23.42■■□□□ 1.34
SPNS1-206ENST00000564476 POLA2Q14181 598 aa23.41■■□□□ 1.34
SPNS1-206ENST00000564476 CCDC152Q4G0S7 254 aa23.41■■□□□ 1.34
SPNS1-206ENST00000564476 FHDC1Q9C0D6 1143 aaPredicted RBP23.41■■□□□ 1.34
SPNS1-206ENST00000564476 PDZRN3Q9UPQ7 1066 aa23.41■■□□□ 1.34
SPNS1-206ENST00000564476 KLRG2A4D1S0 409 aaPredicted RBP23.4■■□□□ 1.34
SPNS1-206ENST00000564476 SRGAP3O43295 1099 aa23.4■■□□□ 1.34
SPNS1-206ENST00000564476 SIRT2Q8IXJ6 389 aa23.4■■□□□ 1.34
SPNS1-206ENST00000564476 CCDC136Q96JN2 1154 aa23.4■■□□□ 1.34
SPNS1-206ENST00000564476 RTL9Q8NET4 1388 aa23.39■■□□□ 1.33
SPNS1-206ENST00000564476 PDE6BP35913 854 aa23.38■■□□□ 1.33
SPNS1-206ENST00000564476 CCDC57Q2TAC2 916 aa23.38■■□□□ 1.33
SPNS1-206ENST00000564476 SYT17Q9BSW7 474 aa23.38■■□□□ 1.33
SPNS1-206ENST00000564476 ABCC12Q96J65 1359 aa23.38■■□□□ 1.33
SPNS1-206ENST00000564476 PNMA6EA0A0J9YXQ4 647 aa23.37■■□□□ 1.33
SPNS1-206ENST00000564476 IFIT5Q13325 482 aaKnown RBP23.37■■□□□ 1.33
SPNS1-206ENST00000564476 FBXO3Q9UK99 471 aa23.36■■□□□ 1.33
SPNS1-206ENST00000564476 ANKRD18BA2A2Z9 1011 aa23.35■■□□□ 1.33
SPNS1-206ENST00000564476 CRY2Q49AN0 593 aa23.35■■□□□ 1.33
SPNS1-206ENST00000564476 HSP90AB4PQ58FF6 505 aa23.35■■□□□ 1.33
SPNS1-206ENST00000564476 GCC1Q96CN9 775 aa23.35■■□□□ 1.33
SPNS1-206ENST00000564476 COPRSQ9NQ92 184 aa23.35■■□□□ 1.33
SPNS1-206ENST00000564476 CHMP3Q9Y3E7 222 aa23.35■■□□□ 1.33
SPNS1-206ENST00000564476 GREM2Q9H772 168 aa23.34■■□□□ 1.33
SPNS1-206ENST00000564476 DCTPP1Q9H773 170 aa23.34■■□□□ 1.33
SPNS1-206ENST00000564476 NOP58Q9Y2X3 529 aaKnown RBP23.34■■□□□ 1.33
SPNS1-206ENST00000564476 IGHDP01880 384 aa23.33■■□□□ 1.33
SPNS1-206ENST00000564476 ITGA6P23229 1130 aa23.33■■□□□ 1.33
SPNS1-206ENST00000564476 RFX5P48382 616 aaPredicted RBP23.33■■□□□ 1.33
SPNS1-206ENST00000564476 CENPQQ7L2Z9 268 aaPredicted RBP23.33■■□□□ 1.33
SPNS1-206ENST00000564476 CCDC24Q8N4L8 307 aa23.33■■□□□ 1.33
SPNS1-206ENST00000564476 CDC5LQ99459 802 aaKnown RBP23.33■■□□□ 1.33
SPNS1-206ENST00000564476 HOXA10P31260 410 aaPredicted RBP23.32■■□□□ 1.32
SPNS1-206ENST00000564476 PTPN12Q05209 780 aaKnown RBP23.32■■□□□ 1.32
SPNS1-206ENST00000564476 FAM161AQ3B820 660 aa23.32■■□□□ 1.32
SPNS1-206ENST00000564476 DDX46Q7L014 1031 aaKnown RBP23.32■■□□□ 1.32
SPNS1-206ENST00000564476 RBM17Q96I25 401 aaKnown RBP23.32■■□□□ 1.32
SPNS1-206ENST00000564476 ANKRD31Q8N7Z5 1873 aa23.32■■□□□ 1.32
SPNS1-206ENST00000564476 DCAF8L1A6NGE4 600 aa23.31■■□□□ 1.32
SPNS1-206ENST00000564476 TAF7LQ5H9L4 462 aa23.31■■□□□ 1.32
SPNS1-206ENST00000564476 B4GALNT3Q6L9W6 998 aa23.31■■□□□ 1.32
SPNS1-206ENST00000564476 C3orf67Q6ZVT6 689 aa23.31■■□□□ 1.32
SPNS1-206ENST00000564476 RPGRQ92834 1020 aaKnown RBP23.31■■□□□ 1.32
SPNS1-206ENST00000564476 RAB11FIP3O75154 756 aa23.3■■□□□ 1.32
SPNS1-206ENST00000564476 SURF6O75683 361 aaKnown RBP23.3■■□□□ 1.32
SPNS1-206ENST00000564476 SMC5Q8IY18 1101 aa23.3■■□□□ 1.32
SPNS1-206ENST00000564476 CRAMP1Q96RY5 1269 aa23.3■■□□□ 1.32
SPNS1-206ENST00000564476 TNRC6CQ9HCJ0 1690 aaKnown RBP23.29■■□□□ 1.32
SPNS1-206ENST00000564476 H0YIN7 160 aa23.29■■□□□ 1.32
SPNS1-206ENST00000564476 CIAO1O76071 339 aa23.29■■□□□ 1.32
SPNS1-206ENST00000564476 NPR1P16066 1061 aa23.29■■□□□ 1.32
SPNS1-206ENST00000564476 TGFB2P61812 414 aa23.29■■□□□ 1.32
SPNS1-206ENST00000564476 G3BP1Q13283 466 aaKnown RBP eCLIP23.29■■□□□ 1.32
SPNS1-206ENST00000564476 ERC1Q8IUD2 1116 aa23.29■■□□□ 1.32
SPNS1-206ENST00000564476 KDM2BQ8NHM5 1336 aa23.29■■□□□ 1.32
SPNS1-206ENST00000564476 C10orf71Q711Q0 1435 aa23.28■■□□□ 1.32
SPNS1-206ENST00000564476 SRGNP10124 158 aa23.28■■□□□ 1.32
SPNS1-206ENST00000564476 ALDH1B1P30837 517 aa23.28■■□□□ 1.32
SPNS1-206ENST00000564476 IGHMBP2P38935 993 aaKnown RBP23.28■■□□□ 1.32
SPNS1-206ENST00000564476 ANKRD18AQ8IVF6 992 aa23.28■■□□□ 1.32
SPNS1-206ENST00000564476 MASTLQ96GX5 879 aa23.28■■□□□ 1.32
SPNS1-206ENST00000564476 CCDC85AQ96PX6 553 aaPredicted RBP23.28■■□□□ 1.32
SPNS1-206ENST00000564476 CD2APQ9Y5K6 639 aa23.28■■□□□ 1.32
SPNS1-206ENST00000564476 BBOX1O75936 387 aa23.27■■□□□ 1.32
SPNS1-206ENST00000564476 RPS8P62241 208 aaKnown RBP23.27■■□□□ 1.32
SPNS1-206ENST00000564476 STYK1Q6J9G0 422 aa23.27■■□□□ 1.32
SPNS1-206ENST00000564476 EYA2O00167 538 aa23.26■■□□□ 1.31
SPNS1-206ENST00000564476 IL15P40933 162 aaPredicted RBP23.26■■□□□ 1.31
SPNS1-206ENST00000564476 GRAPQ13588 217 aa23.26■■□□□ 1.31
SPNS1-206ENST00000564476 LDHAL6AQ6ZMR3 332 aa23.26■■□□□ 1.31
SPNS1-206ENST00000564476 TMC4Q7Z404 712 aa23.26■■□□□ 1.31
SPNS1-206ENST00000564476 C2CD5Q86YS7 1000 aa23.26■■□□□ 1.31
SPNS1-206ENST00000564476 KLHL34Q8N239 644 aa23.26■■□□□ 1.31
SPNS1-206ENST00000564476 GRAPLQ8TC17 118 aaPredicted RBP23.26■■□□□ 1.31
SPNS1-206ENST00000564476 MPHOSPH8Q99549 860 aa23.26■■□□□ 1.31
SPNS1-206ENST00000564476 SEC31BQ9NQW1 1179 aa23.26■■□□□ 1.31
SPNS1-206ENST00000564476 KIF13BQ9NQT8 1826 aa23.26■■□□□ 1.31
SPNS1-206ENST00000564476 YY1P25490 414 aa23.25■■□□□ 1.31
SPNS1-206ENST00000564476 BSDC1Q9NW68 430 aaPredicted RBP23.25■■□□□ 1.31
SPNS1-206ENST00000564476 PA2G4Q9UQ80 394 aaKnown RBP23.25■■□□□ 1.31
SPNS1-206ENST00000564476 KIF1BPQ96EK5 621 aa23.24■■□□□ 1.31
SPNS1-206ENST00000564476 ZNF594Q96JF6 807 aaPredicted RBP23.24■■□□□ 1.31
SPNS1-206ENST00000564476 ZBTB47Q9UFB7 747 aaPredicted RBP23.24■■□□□ 1.31
SPNS1-206ENST00000564476 OS9Q13438 667 aaPredicted RBP23.23■■□□□ 1.31
SPNS1-206ENST00000564476 KLHDC4Q8TBB5 520 aa23.23■■□□□ 1.31
SPNS1-206ENST00000564476 CNKSR1Q969H4 720 aa23.23■■□□□ 1.31
SPNS1-206ENST00000564476 CNNM1Q9NRU3 951 aa23.23■■□□□ 1.31
SPNS1-206ENST00000564476 EXOC6BQ9Y2D4 811 aa23.23■■□□□ 1.31
SPNS1-206ENST00000564476 RIPOR2Q9Y4F9 1068 aa23.23■■□□□ 1.31
SPNS1-206ENST00000564476 TAF1P21675 1872 aa23.23■■□□□ 1.31
SPNS1-206ENST00000564476 CHD4Q14839 1912 aa23.23■■□□□ 1.31
SPNS1-206ENST00000564476 LRRCC1Q9C099 1032 aa23.22■■□□□ 1.31
SPNS1-206ENST00000564476 ATG9AQ7Z3C6 839 aa23.21■■□□□ 1.31
SPNS1-206ENST00000564476 NLGN2Q8NFZ4 835 aa23.21■■□□□ 1.31
SPNS1-206ENST00000564476 RHPN1Q8TCX5 695 aa23.21■■□□□ 1.31
SPNS1-206ENST00000564476 CELF1Q92879 486 aaKnown RBP23.21■■□□□ 1.31
SPNS1-206ENST00000564476 SIL1Q9H173 461 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms