RNA–Protein interactions for RNA: ENST00000563961.5

USP7-208, Transcript of ubiquitin specific peptidase 7, humanhuman

TSL 5

Gene USP7, Length 4,533 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP7-208ENST00000563961 NDUFB9Q9Y6M9 179 aa16.69■□□□□ 0.26
USP7-208ENST00000563961 PTPRMP28827 1452 aa16.69■□□□□ 0.26
USP7-208ENST00000563961 NRXN1Q9ULB1 1477 aa16.69■□□□□ 0.26
USP7-208ENST00000563961 NEXMIFQ5QGS0 1516 aa16.69■□□□□ 0.26
USP7-208ENST00000563961 LRRC7Q96NW7 1537 aa16.69■□□□□ 0.26
USP7-208ENST00000563961 IBTKQ9P2D0 1353 aaPredicted RBP16.69■□□□□ 0.26
USP7-208ENST00000563961 GOLGA8BA8MQT2 603 aa16.69■□□□□ 0.26
USP7-208ENST00000563961 RAD21O60216 631 aa16.69■□□□□ 0.26
USP7-208ENST00000563961 TNNT3P45378 269 aaPredicted RBP16.69■□□□□ 0.26
USP7-208ENST00000563961 BEND3Q5T5X7 828 aa16.69■□□□□ 0.26
USP7-208ENST00000563961 PIBF1Q8WXW3 757 aa16.69■□□□□ 0.26
USP7-208ENST00000563961 METTL22Q9BUU2 404 aaPredicted RBP16.69■□□□□ 0.26
USP7-208ENST00000563961 LMBRD1Q9NUN5 540 aa16.69■□□□□ 0.26
USP7-208ENST00000563961 TSR1Q2NL82 804 aaKnown RBP16.69■□□□□ 0.26
USP7-208ENST00000563961 BICDL1Q6ZP65 573 aa16.69■□□□□ 0.26
USP7-208ENST00000563961 Q6ZUG5 572 aa16.69■□□□□ 0.26
USP7-208ENST00000563961 DDX19AQ9NUU7 478 aaKnown RBP16.69■□□□□ 0.26
USP7-208ENST00000563961 PDCL2Q8N4E4 241 aa16.69■□□□□ 0.26
USP7-208ENST00000563961 SLC52A2Q9HAB3 445 aa16.69■□□□□ 0.26
USP7-208ENST00000563961 EXOC5O00471 708 aa16.68■□□□□ 0.26
USP7-208ENST00000563961 HSPA4P34932 840 aa16.68■□□□□ 0.26
USP7-208ENST00000563961 CHST3Q7LGC8 479 aa16.68■□□□□ 0.26
USP7-208ENST00000563961 ANKRD20A12PQ8NF67 263 aa16.68■□□□□ 0.26
USP7-208ENST00000563961 UBAC1Q9BSL1 405 aa16.68■□□□□ 0.26
USP7-208ENST00000563961 NAPBQ9H115 298 aa16.68■□□□□ 0.26
USP7-208ENST00000563961 ARHGEF40Q8TER5 1519 aa16.68■□□□□ 0.26
USP7-208ENST00000563961 MTERF4Q7Z6M4 381 aaKnown RBP16.68■□□□□ 0.26
USP7-208ENST00000563961 PCMTD1Q96MG8 357 aaPredicted RBP16.68■□□□□ 0.26
USP7-208ENST00000563961 DACT1Q9NYF0 836 aa16.68■□□□□ 0.26
USP7-208ENST00000563961 DIP2CQ9Y2E4 1556 aa16.68■□□□□ 0.26
USP7-208ENST00000563961 POLR3DP05423 398 aaPredicted RBP16.68■□□□□ 0.26
USP7-208ENST00000563961 ZNF165P49910 485 aa16.68■□□□□ 0.26
USP7-208ENST00000563961 HSPA2P54652 639 aa16.68■□□□□ 0.26
USP7-208ENST00000563961 PAG1Q9NWQ8 432 aa16.68■□□□□ 0.26
USP7-208ENST00000563961 TSC1Q92574 1164 aa16.67■□□□□ 0.26
USP7-208ENST00000563961 OSBPL3Q9H4L5 887 aa16.67■□□□□ 0.26
USP7-208ENST00000563961 ZHX1Q9UKY1 873 aaPredicted RBP16.67■□□□□ 0.26
USP7-208ENST00000563961 UNC5CLQ8IV45 518 aa16.67■□□□□ 0.26
USP7-208ENST00000563961 CLIP2Q9UDT6 1046 aa16.67■□□□□ 0.26
USP7-208ENST00000563961 USP16Q9Y5T5 823 aa16.67■□□□□ 0.26
USP7-208ENST00000563961 CLSTN1O94985 981 aa16.67■□□□□ 0.26
USP7-208ENST00000563961 ADAMTS2O95450 1211 aa16.67■□□□□ 0.26
USP7-208ENST00000563961 GCKRQ14397 625 aa16.67■□□□□ 0.26
USP7-208ENST00000563961 TIMM10P62072 90 aa16.66■□□□□ 0.26
USP7-208ENST00000563961 MAP3K12Q12852 859 aa16.66■□□□□ 0.26
USP7-208ENST00000563961 CCDC144CPQ8IYA2 1237 aa16.66■□□□□ 0.26
USP7-208ENST00000563961 PDCL3Q9H2J4 239 aa16.66■□□□□ 0.26
USP7-208ENST00000563961 ADGRB1O14514 1584 aa16.66■□□□□ 0.26
USP7-208ENST00000563961 IL2RBP14784 551 aa16.66■□□□□ 0.26
USP7-208ENST00000563961 ZBTB9Q96C00 473 aa16.66■□□□□ 0.26
USP7-208ENST00000563961 DBNDD2Q9BQY9 259 aa16.66■□□□□ 0.26
USP7-208ENST00000563961 TMX1Q9H3N1 280 aa16.66■□□□□ 0.26
USP7-208ENST00000563961 CPSF1Q10570 1443 aaKnown RBP16.66■□□□□ 0.26
USP7-208ENST00000563961 FSIP1Q8NA03 581 aa16.66■□□□□ 0.26
USP7-208ENST00000563961 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.66■□□□□ 0.26
USP7-208ENST00000563961 UVSSAQ2YD98 709 aa16.65■□□□□ 0.26
USP7-208ENST00000563961 ORC3Q9UBD5 711 aaPredicted RBP16.65■□□□□ 0.26
USP7-208ENST00000563961 MINDY4BA8MYZ0 360 aa16.65■□□□□ 0.26
USP7-208ENST00000563961 SLC3A2P08195 630 aaKnown RBP16.65■□□□□ 0.26
USP7-208ENST00000563961 IGSF3O75054 1194 aa16.65■□□□□ 0.26
USP7-208ENST00000563961 NOLC1Q14978 699 aaKnown RBP eCLIP16.65■□□□□ 0.26
USP7-208ENST00000563961 PROSER3Q2NL68 480 aa16.65■□□□□ 0.26
USP7-208ENST00000563961 HSP90AA4PQ58FG1 418 aa16.65■□□□□ 0.26
USP7-208ENST00000563961 CCDC186Q7Z3E2 898 aa16.65■□□□□ 0.26
USP7-208ENST00000563961 ATP2B3Q16720 1220 aa16.64■□□□□ 0.25
USP7-208ENST00000563961 TNNI3KQ59H18 835 aa16.64■□□□□ 0.25
USP7-208ENST00000563961 FPGT-TNNI3KV9GXZ4 949 aa16.64■□□□□ 0.25
USP7-208ENST00000563961 TNNT1P13805 278 aa16.64■□□□□ 0.25
USP7-208ENST00000563961 SKIDA1Q1XH10 827 aa16.64■□□□□ 0.25
USP7-208ENST00000563961 ZSCAN16Q9H4T2 348 aaPredicted RBP16.64■□□□□ 0.25
USP7-208ENST00000563961 STAP2Q9UGK3 403 aa16.64■□□□□ 0.25
USP7-208ENST00000563961 SLC5A1P13866 664 aa16.64■□□□□ 0.25
USP7-208ENST00000563961 ANO6Q4KMQ2 910 aa16.64■□□□□ 0.25
USP7-208ENST00000563961 CCDC129Q6ZRS4 1044 aa16.64■□□□□ 0.25
USP7-208ENST00000563961 PLBD2Q8NHP8 589 aa16.64■□□□□ 0.25
USP7-208ENST00000563961 DNAJC25Q9H1X3 360 aa16.64■□□□□ 0.25
USP7-208ENST00000563961 SLC27A2O14975 620 aa16.64■□□□□ 0.25
USP7-208ENST00000563961 ANO10Q9NW15 660 aa16.64■□□□□ 0.25
USP7-208ENST00000563961 IQSEC2Q5JU85 1478 aa16.64■□□□□ 0.25
USP7-208ENST00000563961 NCOA7Q8NI08 942 aa16.63■□□□□ 0.25
USP7-208ENST00000563961 CCDC47Q96A33 483 aaKnown RBP16.63■□□□□ 0.25
USP7-208ENST00000563961 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.63■□□□□ 0.25
USP7-208ENST00000563961 V9GYY5 206 aaPredicted RBP16.63■□□□□ 0.25
USP7-208ENST00000563961 MCM5P33992 734 aa16.63■□□□□ 0.25
USP7-208ENST00000563961 UBE2Q2Q8WVN8 375 aa16.63■□□□□ 0.25
USP7-208ENST00000563961 EAF2Q96CJ1 260 aaPredicted RBP16.63■□□□□ 0.25
USP7-208ENST00000563961 A0A0U1RQG5 324 aaPredicted RBP16.63■□□□□ 0.25
USP7-208ENST00000563961 BRD1O95696 1058 aa16.63■□□□□ 0.25
USP7-208ENST00000563961 LUZP1Q86V48 1076 aa16.63■□□□□ 0.25
USP7-208ENST00000563961 CCAR1Q8IX12 1150 aaKnown RBP16.63■□□□□ 0.25
USP7-208ENST00000563961 KLF18A0A0U1RQI7 1052 aa16.62■□□□□ 0.25
USP7-208ENST00000563961 OFD1O75665 1012 aa16.62■□□□□ 0.25
USP7-208ENST00000563961 A1BGP04217 495 aa16.62■□□□□ 0.25
USP7-208ENST00000563961 ARHGEF25Q86VW2 580 aa16.62■□□□□ 0.25
USP7-208ENST00000563961 IFIT3O14879 490 aaKnown RBP16.62■□□□□ 0.25
USP7-208ENST00000563961 ZFYP08048 801 aaPredicted RBP16.62■□□□□ 0.25
USP7-208ENST00000563961 MICU3Q86XE3 530 aa16.62■□□□□ 0.25
USP7-208ENST00000563961 VWDEQ8N2E2 1590 aa16.62■□□□□ 0.25
USP7-208ENST00000563961 EDC3Q96F86 508 aaKnown RBP16.62■□□□□ 0.25
USP7-208ENST00000563961 NEURL1BA8MQ27 555 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 351 ms