RNA–Protein interactions for RNA: ENST00000563901.5

SH3GL3-205, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-205ENST00000563901 FAM161AQ3B820 660 aa33.76■■■■□ 3
SH3GL3-205ENST00000563901 NLRP3Q96P20 1036 aa33.76■■■■□ 3
SH3GL3-205ENST00000563901 GREM2Q9H772 168 aa33.75■■■□□ 2.99
SH3GL3-205ENST00000563901 CSF1RP07333 972 aa33.75■■■□□ 2.99
SH3GL3-205ENST00000563901 BRIP1Q9BX63 1249 aa33.75■■■□□ 2.99
SH3GL3-205ENST00000563901 SRGAP3O43295 1099 aa33.73■■■□□ 2.99
SH3GL3-205ENST00000563901 HSP90B1P14625 803 aaKnown RBP33.73■■■□□ 2.99
SH3GL3-205ENST00000563901 AAMPQ13685 434 aa33.73■■■□□ 2.99
SH3GL3-205ENST00000563901 ATP8B2P98198 1209 aa33.72■■■□□ 2.99
SH3GL3-205ENST00000563901 CACNA1SQ13698 1873 aa33.72■■■□□ 2.99
SH3GL3-205ENST00000563901 KIAA1551Q9HCM1 1747 aa33.72■■■□□ 2.99
SH3GL3-205ENST00000563901 SF3B3Q15393 1217 aaKnown RBP33.71■■■□□ 2.99
SH3GL3-205ENST00000563901 MTX1Q13505 466 aa33.71■■■□□ 2.99
SH3GL3-205ENST00000563901 SEC31BQ9NQW1 1179 aa33.71■■■□□ 2.99
SH3GL3-205ENST00000563901 CCDC152Q4G0S7 254 aa33.7■■■□□ 2.99
SH3GL3-205ENST00000563901 RPAP2Q8IXW5 612 aaPredicted RBP33.7■■■□□ 2.99
SH3GL3-205ENST00000563901 KLHL34Q8N239 644 aa33.7■■■□□ 2.99
SH3GL3-205ENST00000563901 KLHDC4Q8TBB5 520 aa33.7■■■□□ 2.99
SH3GL3-205ENST00000563901 PPP1R1BQ9UD71 204 aaPredicted RBP33.69■■■□□ 2.98
SH3GL3-205ENST00000563901 ITGA6P23229 1130 aa33.68■■■□□ 2.98
SH3GL3-205ENST00000563901 CRY2Q49AN0 593 aa33.68■■■□□ 2.98
SH3GL3-205ENST00000563901 GTF3C3Q9Y5Q9 886 aa33.68■■■□□ 2.98
SH3GL3-205ENST00000563901 KLRG2A4D1S0 409 aaPredicted RBP33.68■■■□□ 2.98
SH3GL3-205ENST00000563901 CHRNA5P30532 468 aa33.68■■■□□ 2.98
SH3GL3-205ENST00000563901 PDE6BP35913 854 aa33.68■■■□□ 2.98
SH3GL3-205ENST00000563901 ZNF594Q96JF6 807 aaPredicted RBP33.68■■■□□ 2.98
SH3GL3-205ENST00000563901 DLEC1Q9Y238 1755 aa33.67■■■□□ 2.98
SH3GL3-205ENST00000563901 RFX5P48382 616 aaPredicted RBP33.67■■■□□ 2.98
SH3GL3-205ENST00000563901 SSH3Q8TE77 659 aa33.67■■■□□ 2.98
SH3GL3-205ENST00000563901 PA2G4Q9UQ80 394 aaKnown RBP33.67■■■□□ 2.98
SH3GL3-205ENST00000563901 POLA2Q14181 598 aa33.66■■■□□ 2.98
SH3GL3-205ENST00000563901 C2CD5Q86YS7 1000 aa33.66■■■□□ 2.98
SH3GL3-205ENST00000563901 RPGRQ92834 1020 aaKnown RBP33.65■■■□□ 2.98
SH3GL3-205ENST00000563901 IFIT5Q13325 482 aaKnown RBP33.64■■■□□ 2.98
SH3GL3-205ENST00000563901 CCDC57Q2TAC2 916 aa33.64■■■□□ 2.98
SH3GL3-205ENST00000563901 ERICH6BQ5W0A0 696 aa33.64■■■□□ 2.98
SH3GL3-205ENST00000563901 RTL9Q8NET4 1388 aa33.64■■■□□ 2.98
SH3GL3-205ENST00000563901 IGHDP01880 384 aa33.64■■■□□ 2.98
SH3GL3-205ENST00000563901 SRGNP10124 158 aa33.64■■■□□ 2.98
SH3GL3-205ENST00000563901 ANKRD18BA2A2Z9 1011 aa33.62■■■□□ 2.97
SH3GL3-205ENST00000563901 CELF1Q92879 486 aaKnown RBP33.62■■■□□ 2.97
SH3GL3-205ENST00000563901 PTPN12Q05209 780 aaKnown RBP33.61■■■□□ 2.97
SH3GL3-205ENST00000563901 DDX46Q7L014 1031 aaKnown RBP33.61■■■□□ 2.97
SH3GL3-205ENST00000563901 LRP5O75197 1615 aa33.61■■■□□ 2.97
SH3GL3-205ENST00000563901 B4GALNT3Q6L9W6 998 aa33.61■■■□□ 2.97
SH3GL3-205ENST00000563901 SLC51AQ86UW1 340 aa33.61■■■□□ 2.97
SH3GL3-205ENST00000563901 SIL1Q9H173 461 aa33.61■■■□□ 2.97
SH3GL3-205ENST00000563901 A0A0G2JLW4 131 aa33.6■■■□□ 2.97
SH3GL3-205ENST00000563901 H0YIN7 160 aa33.6■■■□□ 2.97
SH3GL3-205ENST00000563901 HMMRO75330 724 aa33.6■■■□□ 2.97
SH3GL3-205ENST00000563901 DPEP1P16444 411 aa33.59■■■□□ 2.97
SH3GL3-205ENST00000563901 HDAC1Q13547 482 aaPredicted RBP33.59■■■□□ 2.97
SH3GL3-205ENST00000563901 TAF7LQ5H9L4 462 aa33.59■■■□□ 2.97
SH3GL3-205ENST00000563901 ZNF622Q969S3 477 aaKnown RBP eCLIP33.59■■■□□ 2.975e-6■■□□□ 11.6
SH3GL3-205ENST00000563901 PPP4R2Q9NY27 417 aa33.59■■■□□ 2.97
SH3GL3-205ENST00000563901 RBM17Q96I25 401 aaKnown RBP33.58■■■□□ 2.97
SH3GL3-205ENST00000563901 BRCA1P38398 1863 aaKnown RBP33.58■■■□□ 2.97
SH3GL3-205ENST00000563901 NPR1P16066 1061 aa33.57■■■□□ 2.97
SH3GL3-205ENST00000563901 HOXA10P31260 410 aaPredicted RBP33.57■■■□□ 2.97
SH3GL3-205ENST00000563901 MASTLQ96GX5 879 aa33.57■■■□□ 2.97
SH3GL3-205ENST00000563901 PUS3Q9BZE2 481 aaKnown RBP33.57■■■□□ 2.97
SH3GL3-205ENST00000563901 EXOC6BQ9Y2D4 811 aa33.57■■■□□ 2.97
SH3GL3-205ENST00000563901 SRCAPQ6ZRS2 3230 aa33.57■■■□□ 2.96
SH3GL3-205ENST00000563901 CCDC136Q96JN2 1154 aa33.57■■■□□ 2.96
SH3GL3-205ENST00000563901 CD2APQ9Y5K6 639 aa33.57■■■□□ 2.96
SH3GL3-205ENST00000563901 SLX4Q8IY92 1834 aa33.56■■■□□ 2.96
SH3GL3-205ENST00000563901 NLGN2Q8NFZ4 835 aa33.56■■■□□ 2.96
SH3GL3-205ENST00000563901 RWDD1Q9H446 243 aaPredicted RBP33.56■■■□□ 2.96
SH3GL3-205ENST00000563901 COPRSQ9NQ92 184 aa33.56■■■□□ 2.96
SH3GL3-205ENST00000563901 A0A1B0GUL6 1792 aa33.55■■■□□ 2.96
SH3GL3-205ENST00000563901 SURF6O75683 361 aaKnown RBP33.55■■■□□ 2.96
SH3GL3-205ENST00000563901 KCNA3P22001 575 aa33.55■■■□□ 2.96
SH3GL3-205ENST00000563901 GRAPQ13588 217 aa33.55■■■□□ 2.96
SH3GL3-205ENST00000563901 LRRC24Q50LG9 513 aa33.55■■■□□ 2.96
SH3GL3-205ENST00000563901 GRAPLQ8TC17 118 aaPredicted RBP33.55■■■□□ 2.96
SH3GL3-205ENST00000563901 CDC5LQ99459 802 aaKnown RBP33.55■■■□□ 2.96
SH3GL3-205ENST00000563901 FHDC1Q9C0D6 1143 aaPredicted RBP33.55■■■□□ 2.96
SH3GL3-205ENST00000563901 WWC3Q9ULE0 1092 aa33.55■■■□□ 2.96
SH3GL3-205ENST00000563901 ANKRD18AQ8IVF6 992 aa33.54■■■□□ 2.96
SH3GL3-205ENST00000563901 CRAMP1Q96RY5 1269 aa33.53■■■□□ 2.96
SH3GL3-205ENST00000563901 APBB1O00213 710 aa33.53■■■□□ 2.96
SH3GL3-205ENST00000563901 RPS8P62241 208 aaKnown RBP33.53■■■□□ 2.96
SH3GL3-205ENST00000563901 STYK1Q6J9G0 422 aa33.53■■■□□ 2.96
SH3GL3-205ENST00000563901 IGHMBP2P38935 993 aaKnown RBP33.52■■■□□ 2.96
SH3GL3-205ENST00000563901 TGFB2P61812 414 aa33.52■■■□□ 2.96
SH3GL3-205ENST00000563901 LDHAL6AQ6ZMR3 332 aa33.52■■■□□ 2.96
SH3GL3-205ENST00000563901 DCTPP1Q9H773 170 aa33.51■■■□□ 2.96
SH3GL3-205ENST00000563901 PDZRN3Q9UPQ7 1066 aa33.51■■■□□ 2.96
SH3GL3-205ENST00000563901 MPHOSPH8Q99549 860 aa33.5■■■□□ 2.95
SH3GL3-205ENST00000563901 NOP58Q9Y2X3 529 aaKnown RBP33.5■■■□□ 2.95
SH3GL3-205ENST00000563901 ATG9AQ7Z3C6 839 aa33.5■■■□□ 2.95
SH3GL3-205ENST00000563901 CNNM1Q9NRU3 951 aa33.5■■■□□ 2.95
SH3GL3-205ENST00000563901 EYA2O00167 538 aa33.49■■■□□ 2.95
SH3GL3-205ENST00000563901 LRRC37AA6NMS7 1700 aa33.49■■■□□ 2.95
SH3GL3-205ENST00000563901 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP33.48■■■□□ 2.95
SH3GL3-205ENST00000563901 GOLGB1Q14789 3259 aaKnown RBP33.48■■■□□ 2.95
SH3GL3-205ENST00000563901 ALDH1B1P30837 517 aa33.47■■■□□ 2.95
SH3GL3-205ENST00000563901 OS9Q13438 667 aaPredicted RBP33.47■■■□□ 2.95
SH3GL3-205ENST00000563901 PRPF40BQ6NWY9 871 aaKnown RBP33.47■■■□□ 2.95
SH3GL3-205ENST00000563901 KDM2BQ8NHM5 1336 aa33.47■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms