RNA–Protein interactions for RNA: ENST00000563667.5

PDXDC1-209, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 4

Gene PDXDC1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-209ENST00000563667 NFIXQ14938 502 aa19.21■□□□□ 0.67
PDXDC1-209ENST00000563667 LMBR1LQ6UX01 489 aa19.21■□□□□ 0.67
PDXDC1-209ENST00000563667 ZBTB47Q9UFB7 747 aaPredicted RBP19.21■□□□□ 0.67
PDXDC1-209ENST00000563667 A0A0G2JLW4 131 aa19.2■□□□□ 0.66
PDXDC1-209ENST00000563667 APBB1O00213 710 aa19.2■□□□□ 0.66
PDXDC1-209ENST00000563667 NTSR2O95665 410 aa19.2■□□□□ 0.66
PDXDC1-209ENST00000563667 TM4SF1P30408 202 aa19.2■□□□□ 0.66
PDXDC1-209ENST00000563667 ANKRD45Q5TZF3 282 aa19.2■□□□□ 0.66
PDXDC1-209ENST00000563667 NPHP1O15259 732 aa19.19■□□□□ 0.66
PDXDC1-209ENST00000563667 SURF6O75683 361 aaKnown RBP19.19■□□□□ 0.66
PDXDC1-209ENST00000563667 RABL6Q3YEC7 729 aaPredicted RBP19.19■□□□□ 0.66
PDXDC1-209ENST00000563667 NBPF5PQ86XG9 351 aaPredicted RBP19.19■□□□□ 0.66
PDXDC1-209ENST00000563667 NUTM1Q86Y26 1132 aa19.19■□□□□ 0.66
PDXDC1-209ENST00000563667 NYXQ9GZU5 481 aa19.19■□□□□ 0.66
PDXDC1-209ENST00000563667 EXOC6BQ9Y2D4 811 aa19.19■□□□□ 0.66
PDXDC1-209ENST00000563667 PDE8AO60658 829 aa19.18■□□□□ 0.66
PDXDC1-209ENST00000563667 HSP90B1P14625 803 aaKnown RBP19.18■□□□□ 0.66
PDXDC1-209ENST00000563667 DPEP1P16444 411 aa19.18■□□□□ 0.66
PDXDC1-209ENST00000563667 OS9Q13438 667 aaPredicted RBP19.18■□□□□ 0.66
PDXDC1-209ENST00000563667 SKAP1Q86WV1 359 aa19.18■□□□□ 0.66
PDXDC1-209ENST00000563667 PLA2G12BQ9BX93 195 aa19.18■□□□□ 0.66
PDXDC1-209ENST00000563667 BCL11AQ9H165 835 aa19.18■□□□□ 0.66
PDXDC1-209ENST00000563667 SERPINB2P05120 415 aa19.17■□□□□ 0.66
PDXDC1-209ENST00000563667 HCLS1P14317 486 aaPredicted RBP19.17■□□□□ 0.66
PDXDC1-209ENST00000563667 NUCB1Q02818 461 aa19.17■□□□□ 0.66
PDXDC1-209ENST00000563667 ERFEQ4G0M1 354 aa19.17■□□□□ 0.66
PDXDC1-209ENST00000563667 TPTE2Q6XPS3 522 aa19.17■□□□□ 0.66
PDXDC1-209ENST00000563667 CCDC85AQ96PX6 553 aaPredicted RBP19.17■□□□□ 0.66
PDXDC1-209ENST00000563667 BCS1LQ9Y276 419 aa19.17■□□□□ 0.66
PDXDC1-209ENST00000563667 RGS3P49796 1198 aa19.16■□□□□ 0.66
PDXDC1-209ENST00000563667 CTSWP56202 376 aa19.16■□□□□ 0.66
PDXDC1-209ENST00000563667 HSP90AB4PQ58FF6 505 aa19.16■□□□□ 0.66
PDXDC1-209ENST00000563667 PA2G4Q9UQ80 394 aaKnown RBP19.16■□□□□ 0.66
PDXDC1-209ENST00000563667 CHD1LQ86WJ1 897 aa19.15■□□□□ 0.66
PDXDC1-209ENST00000563667 LNPKQ9C0E8 428 aa19.15■□□□□ 0.66
PDXDC1-209ENST00000563667 CARMIL3Q8ND23 1372 aa19.15■□□□□ 0.66
PDXDC1-209ENST00000563667 RAB11FIP3O75154 756 aa19.14■□□□□ 0.65
PDXDC1-209ENST00000563667 G3BP1Q13283 466 aaKnown RBP eCLIP19.14■□□□□ 0.652e-11■□□□□ 8.4
PDXDC1-209ENST00000563667 CCDC57Q2TAC2 916 aa19.14■□□□□ 0.65
PDXDC1-209ENST00000563667 KLHDC4Q8TBB5 520 aa19.14■□□□□ 0.65
PDXDC1-209ENST00000563667 SIL1Q9H173 461 aa19.14■□□□□ 0.65
PDXDC1-209ENST00000563667 SMARCA5O60264 1052 aaPredicted RBP19.13■□□□□ 0.65
PDXDC1-209ENST00000563667 CSF1RP07333 972 aa19.13■□□□□ 0.65
PDXDC1-209ENST00000563667 RFX5P48382 616 aaPredicted RBP19.13■□□□□ 0.65
PDXDC1-209ENST00000563667 FAM161AQ3B820 660 aa19.13■□□□□ 0.65
PDXDC1-209ENST00000563667 TAF7LQ5H9L4 462 aa19.13■□□□□ 0.65
PDXDC1-209ENST00000563667 TTLL11Q8NHH1 800 aa19.13■□□□□ 0.65
PDXDC1-209ENST00000563667 NOP58Q9Y2X3 529 aaKnown RBP19.13■□□□□ 0.65
PDXDC1-209ENST00000563667 CHRNA5P30532 468 aa19.12■□□□□ 0.65
PDXDC1-209ENST00000563667 IFIT5Q13325 482 aaKnown RBP19.12■□□□□ 0.65
PDXDC1-209ENST00000563667 CCDC24Q8N4L8 307 aa19.12■□□□□ 0.65
PDXDC1-209ENST00000563667 CNBD1Q8NA66 436 aa19.12■□□□□ 0.65
PDXDC1-209ENST00000563667 LRRCC1Q9C099 1032 aa19.12■□□□□ 0.65
PDXDC1-209ENST00000563667 COPRSQ9NQ92 184 aa19.12■□□□□ 0.65
PDXDC1-209ENST00000563667 PIM2Q9P1W9 311 aa19.12■□□□□ 0.65
PDXDC1-209ENST00000563667 ANKRD18BA2A2Z9 1011 aa19.11■□□□□ 0.65
PDXDC1-209ENST00000563667 PTPN12Q05209 780 aaKnown RBP19.11■□□□□ 0.65
PDXDC1-209ENST00000563667 SLC10A5Q5PT55 438 aa19.11■□□□□ 0.65
PDXDC1-209ENST00000563667 ZNF784Q8NCA9 323 aaPredicted RBP19.11■□□□□ 0.65
PDXDC1-209ENST00000563667 GREM2Q9H772 168 aa19.11■□□□□ 0.65
PDXDC1-209ENST00000563667 KIF13BQ9NQT8 1826 aa19.11■□□□□ 0.65
PDXDC1-209ENST00000563667 CCDC152Q4G0S7 254 aa19.1■□□□□ 0.65
PDXDC1-209ENST00000563667 DALRD3Q5D0E6 543 aaKnown RBP19.1■□□□□ 0.65
PDXDC1-209ENST00000563667 ERC1Q8IUD2 1116 aa19.1■□□□□ 0.65
PDXDC1-209ENST00000563667 KIF1BPQ96EK5 621 aa19.1■□□□□ 0.65
PDXDC1-209ENST00000563667 ZNF594Q96JF6 807 aaPredicted RBP19.1■□□□□ 0.65
PDXDC1-209ENST00000563667 ABCC12Q96J65 1359 aa19.09■□□□□ 0.65
PDXDC1-209ENST00000563667 KCNA3P22001 575 aa19.09■□□□□ 0.65
PDXDC1-209ENST00000563667 ITGA6P23229 1130 aa19.09■□□□□ 0.65
PDXDC1-209ENST00000563667 PDE4AP27815 886 aa19.09■□□□□ 0.65
PDXDC1-209ENST00000563667 ST5P78524 1137 aa19.09■□□□□ 0.65
PDXDC1-209ENST00000563667 RHPN1Q8TCX5 695 aa19.09■□□□□ 0.65
PDXDC1-209ENST00000563667 NLRP3Q96P20 1036 aa19.09■□□□□ 0.65
PDXDC1-209ENST00000563667 IL1RAPL2Q9NP60 686 aa19.09■□□□□ 0.65
PDXDC1-209ENST00000563667 PRR5LQ6MZQ0 368 aa19.08■□□□□ 0.64
PDXDC1-209ENST00000563667 ARHGAP27Q6ZUM4 889 aa19.08■□□□□ 0.64
PDXDC1-209ENST00000563667 C2CD5Q86YS7 1000 aa19.08■□□□□ 0.64
PDXDC1-209ENST00000563667 KIAA1551Q9HCM1 1747 aa19.08■□□□□ 0.64
PDXDC1-209ENST00000563667 H0YIN7 160 aa19.07■□□□□ 0.64
PDXDC1-209ENST00000563667 C3orf67Q6ZVT6 689 aa19.07■□□□□ 0.64
PDXDC1-209ENST00000563667 C16orf71Q8IYS4 520 aaPredicted RBP19.07■□□□□ 0.64
PDXDC1-209ENST00000563667 DDX60Q8IY21 1712 aaKnown RBP19.07■□□□□ 0.64
PDXDC1-209ENST00000563667 CHD4Q14839 1912 aa19.06■□□□□ 0.64
PDXDC1-209ENST00000563667 EYA2O00167 538 aa19.06■□□□□ 0.64
PDXDC1-209ENST00000563667 SF3B3Q15393 1217 aaKnown RBP19.06■□□□□ 0.64
PDXDC1-209ENST00000563667 LAMB2P55268 1798 aa19.06■□□□□ 0.64
PDXDC1-209ENST00000563667 SASH1O94885 1247 aa19.05■□□□□ 0.64
PDXDC1-209ENST00000563667 PDE6BP35913 854 aa19.05■□□□□ 0.64
PDXDC1-209ENST00000563667 BRIP1Q9BX63 1249 aa19.05■□□□□ 0.64
PDXDC1-209ENST00000563667 SEC31BQ9NQW1 1179 aa19.05■□□□□ 0.64
PDXDC1-209ENST00000563667 CNNM1Q9NRU3 951 aa19.05■□□□□ 0.64
PDXDC1-209ENST00000563667 MYH3P11055 1940 aa19.05■□□□□ 0.64
PDXDC1-209ENST00000563667 CIAO1O76071 339 aa19.04■□□□□ 0.64
PDXDC1-209ENST00000563667 IL15P40933 162 aaPredicted RBP19.04■□□□□ 0.64
PDXDC1-209ENST00000563667 LRRC24Q50LG9 513 aa19.04■□□□□ 0.64
PDXDC1-209ENST00000563667 LDHAL6AQ6ZMR3 332 aa19.04■□□□□ 0.64
PDXDC1-209ENST00000563667 CLASRPQ8N2M8 674 aaKnown RBP19.04■□□□□ 0.64
PDXDC1-209ENST00000563667 PUS3Q9BZE2 481 aaKnown RBP19.04■□□□□ 0.64
PDXDC1-209ENST00000563667 NRXN2Q9P2S2 1712 aa19.04■□□□□ 0.64
PDXDC1-209ENST00000563667 IGHMBP2P38935 993 aaKnown RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms