RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 CHRNA2Q15822 529 aa14.93□□□□□ -0.02
CCDC187-201ENST00000563590 PI4K2BQ8TCG2 481 aa14.93□□□□□ -0.02
CCDC187-201ENST00000563590 CHPF2Q9P2E5 772 aa14.93□□□□□ -0.02
CCDC187-201ENST00000563590 ADAMTS13Q76LX8 1427 aa14.93□□□□□ -0.02
CCDC187-201ENST00000563590 SNW1Q13573 536 aaKnown RBP14.93□□□□□ -0.02
CCDC187-201ENST00000563590 CWF19L2Q2TBE0 894 aaKnown RBP14.93□□□□□ -0.02
CCDC187-201ENST00000563590 ADCK5Q3MIX3 580 aa14.93□□□□□ -0.02
CCDC187-201ENST00000563590 CCDC144BQ3MJ40 725 aa14.93□□□□□ -0.02
CCDC187-201ENST00000563590 TMCO3Q6UWJ1 677 aa14.93□□□□□ -0.02
CCDC187-201ENST00000563590 RIC3Q7Z5B4 369 aa14.93□□□□□ -0.02
CCDC187-201ENST00000563590 CCDC144CPQ8IYA2 1237 aa14.93□□□□□ -0.02
CCDC187-201ENST00000563590 ARGLU1Q9NWB6 273 aaPredicted RBP14.93□□□□□ -0.02
CCDC187-201ENST00000563590 HYPKQ9NX55 129 aa14.93□□□□□ -0.02
CCDC187-201ENST00000563590 GNAT3A8MTJ3 354 aa14.93□□□□□ -0.02
CCDC187-201ENST00000563590 BMS1Q14692 1282 aaKnown RBP14.93□□□□□ -0.02
CCDC187-201ENST00000563590 CHMP4CQ96CF2 233 aa14.93□□□□□ -0.02
CCDC187-201ENST00000563590 SIRT1Q96EB6 747 aa14.93□□□□□ -0.02
CCDC187-201ENST00000563590 USP44Q9H0E7 712 aa14.93□□□□□ -0.02
CCDC187-201ENST00000563590 BOLA2Q9H3K6 86 aa14.93□□□□□ -0.02
CCDC187-201ENST00000563590 PLEKHG3A1L390 1219 aa14.92□□□□□ -0.02
CCDC187-201ENST00000563590 BIN1O00499 593 aa14.92□□□□□ -0.02
CCDC187-201ENST00000563590 GUCY1B3Q02153 619 aa14.92□□□□□ -0.02
CCDC187-201ENST00000563590 CCDC73Q6ZRK6 1079 aa14.92□□□□□ -0.02
CCDC187-201ENST00000563590 ZSWIM4Q9H7M6 989 aa14.92□□□□□ -0.02
CCDC187-201ENST00000563590 AOX1Q06278 1338 aa14.92□□□□□ -0.02
CCDC187-201ENST00000563590 HNRNPH2P55795 449 aaKnown RBP14.92□□□□□ -0.02
CCDC187-201ENST00000563590 SF3A1Q15459 793 aaKnown RBP14.92□□□□□ -0.02
CCDC187-201ENST00000563590 BTBD11A6QL63 1104 aa14.92□□□□□ -0.02
CCDC187-201ENST00000563590 RHPN1Q8TCX5 695 aa14.92□□□□□ -0.02
CCDC187-201ENST00000563590 TOMM22Q9NS69 142 aa14.92□□□□□ -0.02
CCDC187-201ENST00000563590 ATP5J2-PTCD1G3V325 749 aa14.91□□□□□ -0.02
CCDC187-201ENST00000563590 EPB41L2O43491 1005 aaKnown RBP14.91□□□□□ -0.02
CCDC187-201ENST00000563590 PTCD1O75127 700 aaKnown RBP14.91□□□□□ -0.02
CCDC187-201ENST00000563590 NR1I2O75469 434 aa14.91□□□□□ -0.02
CCDC187-201ENST00000563590 AEBP2Q6ZN18 517 aaPredicted RBP14.91□□□□□ -0.02
CCDC187-201ENST00000563590 RUFY2Q8WXA3 655 aa14.91□□□□□ -0.02
CCDC187-201ENST00000563590 KINO60870 393 aaKnown RBP14.91□□□□□ -0.02
CCDC187-201ENST00000563590 PTH1RQ03431 593 aa14.91□□□□□ -0.02
CCDC187-201ENST00000563590 ST3GAL1Q11201 340 aa14.91□□□□□ -0.02
CCDC187-201ENST00000563590 GPS2Q13227 327 aa14.91□□□□□ -0.02
CCDC187-201ENST00000563590 DNAI1Q9UI46 699 aa14.91□□□□□ -0.02
CCDC187-201ENST00000563590 PRAMEF22A3QJZ6 481 aa14.91□□□□□ -0.02
CCDC187-201ENST00000563590 C19orf44Q9H6X5 657 aa14.91□□□□□ -0.02
CCDC187-201ENST00000563590 KRBA2Q6ZNG9 492 aa14.9□□□□□ -0.02
CCDC187-201ENST00000563590 TMC6Q7Z403 805 aa14.9□□□□□ -0.02
CCDC187-201ENST00000563590 TUBGCP6Q96RT7 1819 aa14.9□□□□□ -0.02
CCDC187-201ENST00000563590 NBPF7P0C2Y1 421 aaPredicted RBP14.9□□□□□ -0.02
CCDC187-201ENST00000563590 ME1P48163 572 aa14.9□□□□□ -0.02
CCDC187-201ENST00000563590 LMAN1P49257 510 aa14.9□□□□□ -0.02
CCDC187-201ENST00000563590 ME3Q16798 604 aa14.9□□□□□ -0.02
CCDC187-201ENST00000563590 AACSQ86V21 672 aa14.9□□□□□ -0.02
CCDC187-201ENST00000563590 SSH3Q8TE77 659 aa14.9□□□□□ -0.02
CCDC187-201ENST00000563590 PTPRUQ92729 1446 aa14.9□□□□□ -0.02
CCDC187-201ENST00000563590 PDCP20941 246 aa14.89□□□□□ -0.03
CCDC187-201ENST00000563590 LRRC2Q9BYS8 371 aa14.89□□□□□ -0.03
CCDC187-201ENST00000563590 RAB11FIP4Q86YS3 637 aa14.89□□□□□ -0.03
CCDC187-201ENST00000563590 AOPEPQ8N6M6 819 aa14.89□□□□□ -0.03
CCDC187-201ENST00000563590 RSPH14Q9UHP6 348 aa14.89□□□□□ -0.03
CCDC187-201ENST00000563590 IRX3P78415 501 aaPredicted RBP14.88□□□□□ -0.03
CCDC187-201ENST00000563590 LARP1Q6PKG0 1096 aaKnown RBP14.88□□□□□ -0.03
CCDC187-201ENST00000563590 ERO1AQ96HE7 468 aa14.88□□□□□ -0.03
CCDC187-201ENST00000563590 ZCCHC17Q9NP64 241 aaKnown RBP14.88□□□□□ -0.03
CCDC187-201ENST00000563590 DLC1Q96QB1 1528 aa14.88□□□□□ -0.03
CCDC187-201ENST00000563590 BLOC1S2Q6QNY1 142 aa14.88□□□□□ -0.03
CCDC187-201ENST00000563590 PDILTQ8N807 584 aa14.88□□□□□ -0.03
CCDC187-201ENST00000563590 CCDC191Q8NCU4 936 aa14.88□□□□□ -0.03
CCDC187-201ENST00000563590 SCAND2PQ9GZW5 306 aaPredicted RBP14.88□□□□□ -0.03
CCDC187-201ENST00000563590 DDX19AQ9NUU7 478 aaKnown RBP14.88□□□□□ -0.03
CCDC187-201ENST00000563590 MORC2Q9Y6X9 1032 aaPredicted RBP14.88□□□□□ -0.03
CCDC187-201ENST00000563590 CCDC171Q6TFL3 1326 aa14.88□□□□□ -0.03
CCDC187-201ENST00000563590 SEC31AO94979 1220 aaKnown RBP14.88□□□□□ -0.03
CCDC187-201ENST00000563590 GYS2P54840 703 aa14.88□□□□□ -0.03
CCDC187-201ENST00000563590 COL9A3Q14050 684 aaPredicted RBP14.88□□□□□ -0.03
CCDC187-201ENST00000563590 HSP90AA4PQ58FG1 418 aa14.88□□□□□ -0.03
CCDC187-201ENST00000563590 LRRC8AQ8IWT6 810 aa14.88□□□□□ -0.03
CCDC187-201ENST00000563590 FSD1Q9BTV5 496 aa14.88□□□□□ -0.03
CCDC187-201ENST00000563590 G3BP1Q13283 466 aaKnown RBP eCLIP14.87□□□□□ -0.03
CCDC187-201ENST00000563590 PTPN21Q16825 1174 aa14.87□□□□□ -0.03
CCDC187-201ENST00000563590 VPS53Q5VIR6 699 aa14.87□□□□□ -0.03
CCDC187-201ENST00000563590 CLASRPQ8N2M8 674 aaKnown RBP14.87□□□□□ -0.03
CCDC187-201ENST00000563590 EDC3Q96F86 508 aaKnown RBP14.87□□□□□ -0.03
CCDC187-201ENST00000563590 TPM4P67936 248 aa14.87□□□□□ -0.03
CCDC187-201ENST00000563590 KIF1BPQ96EK5 621 aa14.87□□□□□ -0.03
CCDC187-201ENST00000563590 SH2B1Q9NRF2 756 aaPredicted RBP14.87□□□□□ -0.03
CCDC187-201ENST00000563590 STRN4Q9NRL3 753 aa14.87□□□□□ -0.03
CCDC187-201ENST00000563590 SFPQP23246 707 aaKnown RBP eCLIP14.87□□□□□ -0.03
CCDC187-201ENST00000563590 TTLL5Q6EMB2 1281 aa14.87□□□□□ -0.03
CCDC187-201ENST00000563590 ZSCAN31Q96LW9 406 aaPredicted RBP14.87□□□□□ -0.03
CCDC187-201ENST00000563590 EPC1Q9H2F5 836 aa14.87□□□□□ -0.03
CCDC187-201ENST00000563590 TPCN1Q9ULQ1 816 aa14.86□□□□□ -0.03
CCDC187-201ENST00000563590 ARHGEF10O15013 1369 aa14.86□□□□□ -0.03
CCDC187-201ENST00000563590 NPHP4O75161 1426 aaPredicted RBP14.86□□□□□ -0.03
CCDC187-201ENST00000563590 EVA1CP58658 441 aa14.86□□□□□ -0.03
CCDC187-201ENST00000563590 GPATCH11Q8N954 259 aa14.85□□□□□ -0.03
CCDC187-201ENST00000563590 GPATCH3Q96I76 525 aa14.85□□□□□ -0.03
CCDC187-201ENST00000563590 ZSWIM6Q9HCJ5 1215 aa14.85□□□□□ -0.03
CCDC187-201ENST00000563590 TTC21AQ8NDW8 1320 aa14.85□□□□□ -0.03
CCDC187-201ENST00000563590 GCP02774 474 aa14.85□□□□□ -0.03
CCDC187-201ENST00000563590 PLA2G4DQ86XP0 818 aa14.85□□□□□ -0.03
CCDC187-201ENST00000563590 CCAR1Q8IX12 1150 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms