RNA–Protein interactions for RNA: ENST00000563517.5

TUBGCP4-206, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 5

Gene TUBGCP4, Length 771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-206ENST00000563517 DDX60Q8IY21 1712 aaKnown RBP22.47■■□□□ 1.19
TUBGCP4-206ENST00000563517 LAMB2P55268 1798 aa22.46■■□□□ 1.19
TUBGCP4-206ENST00000563517 CSF1RP07333 972 aa22.46■■□□□ 1.19
TUBGCP4-206ENST00000563517 NPR1P16066 1061 aa22.46■■□□□ 1.19
TUBGCP4-206ENST00000563517 AAMPQ13685 434 aa22.46■■□□□ 1.19
TUBGCP4-206ENST00000563517 DDX46Q7L014 1031 aaKnown RBP22.46■■□□□ 1.19
TUBGCP4-206ENST00000563517 EXOC6Q8TAG9 804 aa22.46■■□□□ 1.19
TUBGCP4-206ENST00000563517 ZNF622Q969S3 477 aaKnown RBP eCLIP22.46■■□□□ 1.19
TUBGCP4-206ENST00000563517 MASTLQ96GX5 879 aa22.46■■□□□ 1.19
TUBGCP4-206ENST00000563517 RBM17Q96I25 401 aaKnown RBP22.46■■□□□ 1.19
TUBGCP4-206ENST00000563517 FHDC1Q9C0D6 1143 aaPredicted RBP22.46■■□□□ 1.19
TUBGCP4-206ENST00000563517 SRGNP10124 158 aa22.45■■□□□ 1.18
TUBGCP4-206ENST00000563517 CHRNA5P30532 468 aa22.45■■□□□ 1.18
TUBGCP4-206ENST00000563517 RABL6Q3YEC7 729 aaPredicted RBP22.45■■□□□ 1.18
TUBGCP4-206ENST00000563517 ANKRD31Q8N7Z5 1873 aa22.45■■□□□ 1.18
TUBGCP4-206ENST00000563517 A0A0G2JLW4 131 aa22.44■■□□□ 1.18
TUBGCP4-206ENST00000563517 DPEP1P16444 411 aa22.44■■□□□ 1.18
TUBGCP4-206ENST00000563517 IFIT5Q13325 482 aaKnown RBP22.44■■□□□ 1.18
TUBGCP4-206ENST00000563517 CCDC57Q2TAC2 916 aa22.44■■□□□ 1.18
TUBGCP4-206ENST00000563517 ANKRD44Q8N8A2 993 aa22.44■■□□□ 1.18
TUBGCP4-206ENST00000563517 GREM2Q9H772 168 aa22.44■■□□□ 1.18
TUBGCP4-206ENST00000563517 TNRC6CQ9HCJ0 1690 aaKnown RBP22.44■■□□□ 1.18
TUBGCP4-206ENST00000563517 LRP5O75197 1615 aa22.43■■□□□ 1.18
TUBGCP4-206ENST00000563517 FAM161AQ3B820 660 aa22.43■■□□□ 1.18
TUBGCP4-206ENST00000563517 STYK1Q6J9G0 422 aa22.43■■□□□ 1.18
TUBGCP4-206ENST00000563517 KIF13BQ9NQT8 1826 aa22.43■■□□□ 1.18
TUBGCP4-206ENST00000563517 RTL9Q8NET4 1388 aa22.42■■□□□ 1.18
TUBGCP4-206ENST00000563517 ANKRD18BA2A2Z9 1011 aa22.42■■□□□ 1.18
TUBGCP4-206ENST00000563517 ITGA6P23229 1130 aa22.42■■□□□ 1.18
TUBGCP4-206ENST00000563517 ALDH1B1P30837 517 aa22.42■■□□□ 1.18
TUBGCP4-206ENST00000563517 HOXA10P31260 410 aaPredicted RBP22.42■■□□□ 1.18
TUBGCP4-206ENST00000563517 TAF7LQ5H9L4 462 aa22.42■■□□□ 1.18
TUBGCP4-206ENST00000563517 CRAMP1Q96RY5 1269 aa22.42■■□□□ 1.18
TUBGCP4-206ENST00000563517 CDC5LQ99459 802 aaKnown RBP22.42■■□□□ 1.18
TUBGCP4-206ENST00000563517 MYH3P11055 1940 aa22.41■■□□□ 1.18
TUBGCP4-206ENST00000563517 SRGAP3O43295 1099 aa22.41■■□□□ 1.18
TUBGCP4-206ENST00000563517 RPAP2Q8IXW5 612 aaPredicted RBP22.41■■□□□ 1.18
TUBGCP4-206ENST00000563517 CNKSR1Q969H4 720 aa22.41■■□□□ 1.18
TUBGCP4-206ENST00000563517 SYT17Q9BSW7 474 aa22.41■■□□□ 1.18
TUBGCP4-206ENST00000563517 ATP8B2P98198 1209 aa22.4■■□□□ 1.18
TUBGCP4-206ENST00000563517 MTX1Q13505 466 aa22.4■■□□□ 1.18
TUBGCP4-206ENST00000563517 CEP85Q6P2H3 762 aa22.4■■□□□ 1.18
TUBGCP4-206ENST00000563517 NLGN2Q8NFZ4 835 aa22.4■■□□□ 1.18
TUBGCP4-206ENST00000563517 SEC31BQ9NQW1 1179 aa22.4■■□□□ 1.18
TUBGCP4-206ENST00000563517 PIM2Q9P1W9 311 aa22.4■■□□□ 1.18
TUBGCP4-206ENST00000563517 GRAPQ13588 217 aa22.39■■□□□ 1.17
TUBGCP4-206ENST00000563517 ANKRD18AQ8IVF6 992 aa22.39■■□□□ 1.17
TUBGCP4-206ENST00000563517 GRAPLQ8TC17 118 aaPredicted RBP22.39■■□□□ 1.17
TUBGCP4-206ENST00000563517 HMMRO75330 724 aa22.38■■□□□ 1.17
TUBGCP4-206ENST00000563517 KCNA3P22001 575 aa22.38■■□□□ 1.17
TUBGCP4-206ENST00000563517 IGHMBP2P38935 993 aaKnown RBP22.38■■□□□ 1.17
TUBGCP4-206ENST00000563517 TTLL6Q8N841 843 aa22.38■■□□□ 1.17
TUBGCP4-206ENST00000563517 BBOX1O75936 387 aa22.37■■□□□ 1.17
TUBGCP4-206ENST00000563517 RPS8P62241 208 aaKnown RBP22.37■■□□□ 1.17
TUBGCP4-206ENST00000563517 MPHOSPH8Q99549 860 aa22.37■■□□□ 1.17
TUBGCP4-206ENST00000563517 PNMA6EA0A0J9YXQ4 647 aa22.36■■□□□ 1.17
TUBGCP4-206ENST00000563517 DALRD3Q5D0E6 543 aaKnown RBP22.36■■□□□ 1.17
TUBGCP4-206ENST00000563517 CELF1Q92879 486 aaKnown RBP22.36■■□□□ 1.17
TUBGCP4-206ENST00000563517 TMX4Q9H1E5 349 aaPredicted RBP22.36■■□□□ 1.17
TUBGCP4-206ENST00000563517 COL11A2P13942 1736 aaPredicted RBP22.36■■□□□ 1.17
TUBGCP4-206ENST00000563517 PRPF40BQ6NWY9 871 aaKnown RBP22.35■■□□□ 1.17
TUBGCP4-206ENST00000563517 TMC4Q7Z404 712 aa22.35■■□□□ 1.17
TUBGCP4-206ENST00000563517 PCDHB15Q9Y5E8 787 aa22.35■■□□□ 1.17
TUBGCP4-206ENST00000563517 PPEF1O14829 653 aaPredicted RBP22.34■■□□□ 1.17
TUBGCP4-206ENST00000563517 SSH3Q8TE77 659 aa22.34■■□□□ 1.17
TUBGCP4-206ENST00000563517 ZNF594Q96JF6 807 aaPredicted RBP22.34■■□□□ 1.17
TUBGCP4-206ENST00000563517 RFX5P48382 616 aaPredicted RBP22.33■■□□□ 1.17
TUBGCP4-206ENST00000563517 POLA2Q14181 598 aa22.33■■□□□ 1.17
TUBGCP4-206ENST00000563517 LDHAL6AQ6ZMR3 332 aa22.33■■□□□ 1.17
TUBGCP4-206ENST00000563517 CNNM1Q9NRU3 951 aa22.33■■□□□ 1.17
TUBGCP4-206ENST00000563517 WWC3Q9ULE0 1092 aa22.33■■□□□ 1.17
TUBGCP4-206ENST00000563517 KIAA1551Q9HCM1 1747 aa22.32■■□□□ 1.16
TUBGCP4-206ENST00000563517 PTPN12Q05209 780 aaKnown RBP22.32■■□□□ 1.16
TUBGCP4-206ENST00000563517 SIRT2Q8IXJ6 389 aa22.32■■□□□ 1.16
TUBGCP4-206ENST00000563517 KLHDC4Q8TBB5 520 aa22.32■■□□□ 1.16
TUBGCP4-206ENST00000563517 COPRSQ9NQ92 184 aa22.32■■□□□ 1.16
TUBGCP4-206ENST00000563517 BSDC1Q9NW68 430 aaPredicted RBP22.32■■□□□ 1.16
TUBGCP4-206ENST00000563517 BCS1LQ9Y276 419 aa22.32■■□□□ 1.16
TUBGCP4-206ENST00000563517 DLEC1Q9Y238 1755 aa22.32■■□□□ 1.16
TUBGCP4-206ENST00000563517 SIL1Q9H173 461 aa22.31■■□□□ 1.16
TUBGCP4-206ENST00000563517 PA2G4Q9UQ80 394 aaKnown RBP22.31■■□□□ 1.16
TUBGCP4-206ENST00000563517 ZNF219Q9P2Y4 722 aaPredicted RBP22.3■■□□□ 1.16
TUBGCP4-206ENST00000563517 ATP6V0A2Q9Y487 856 aa22.3■■□□□ 1.16
TUBGCP4-206ENST00000563517 SURF6O75683 361 aaKnown RBP22.29■■□□□ 1.16
TUBGCP4-206ENST00000563517 G3BP1Q13283 466 aaKnown RBP eCLIP22.29■■□□□ 1.16
TUBGCP4-206ENST00000563517 ERICH6BQ5W0A0 696 aa22.29■■□□□ 1.16
TUBGCP4-206ENST00000563517 SP8Q8IXZ3 490 aa22.29■■□□□ 1.16
TUBGCP4-206ENST00000563517 FBXO3Q9UK99 471 aa22.29■■□□□ 1.16
TUBGCP4-206ENST00000563517 TAF1P21675 1872 aa22.28■■□□□ 1.16
TUBGCP4-206ENST00000563517 EYA2O00167 538 aa22.28■■□□□ 1.16
TUBGCP4-206ENST00000563517 C21orf2O43822 256 aa22.28■■□□□ 1.16
TUBGCP4-206ENST00000563517 CIAO1O76071 339 aa22.28■■□□□ 1.16
TUBGCP4-206ENST00000563517 OS9Q13438 667 aaPredicted RBP22.28■■□□□ 1.16
TUBGCP4-206ENST00000563517 SOGA3Q5TF21 947 aa22.28■■□□□ 1.16
TUBGCP4-206ENST00000563517 CC2D2BQ6DHV5 1058 aa22.28■■□□□ 1.16
TUBGCP4-206ENST00000563517 PELP1Q8IZL8 1130 aaKnown RBP22.28■■□□□ 1.16
TUBGCP4-206ENST00000563517 RWDD1Q9H446 243 aaPredicted RBP22.28■■□□□ 1.16
TUBGCP4-206ENST00000563517 HDAC1Q13547 482 aaPredicted RBP22.27■■□□□ 1.16
TUBGCP4-206ENST00000563517 LRRC24Q50LG9 513 aa22.27■■□□□ 1.16
TUBGCP4-206ENST00000563517 HSP90AB4PQ58FF6 505 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms