RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 AIMP1Q12904 312 aaKnown RBP24.45■■□□□ 1.5
NME3-204ENST00000563498 TMC4Q7Z404 712 aa24.45■■□□□ 1.5
NME3-204ENST00000563498 TRMT112Q9UI30 125 aaKnown RBP24.45■■□□□ 1.5
NME3-204ENST00000563498 GMPSP49915 693 aaPredicted RBP24.44■■□□□ 1.5
NME3-204ENST00000563498 GRAPQ13588 217 aa24.44■■□□□ 1.5
NME3-204ENST00000563498 CIAPIN1Q6FI81 312 aa24.44■■□□□ 1.5
NME3-204ENST00000563498 GRAPLQ8TC17 118 aaPredicted RBP24.44■■□□□ 1.5
NME3-204ENST00000563498 GPR101Q96P66 508 aaPredicted RBP24.44■■□□□ 1.5
NME3-204ENST00000563498 PGAP2Q9UHJ9 254 aa24.44■■□□□ 1.5
NME3-204ENST00000563498 CHL1O00533 1208 aa24.43■■□□□ 1.5
NME3-204ENST00000563498 TNIP1Q15025 636 aa24.43■■□□□ 1.5
NME3-204ENST00000563498 CYP4F22Q6NT55 531 aa24.43■■□□□ 1.5
NME3-204ENST00000563498 PAXIP1Q6ZW49 1069 aaPredicted RBP24.43■■□□□ 1.5
NME3-204ENST00000563498 ZC3H15Q8WU90 426 aaKnown RBP24.43■■□□□ 1.5
NME3-204ENST00000563498 NECTIN2Q92692 538 aa24.43■■□□□ 1.5
NME3-204ENST00000563498 BEGAINQ9BUH8 593 aa24.43■■□□□ 1.5
NME3-204ENST00000563498 LRRC37AA6NMS7 1700 aa24.41■■□□□ 1.5
NME3-204ENST00000563498 MAP2K2P36507 400 aa24.41■■□□□ 1.5
NME3-204ENST00000563498 HHIPL1Q96JK4 782 aa24.41■■□□□ 1.5
NME3-204ENST00000563498 SAPCD2Q86UD0 394 aa24.4■■□□□ 1.5
NME3-204ENST00000563498 BCL2L13Q9BXK5 485 aa24.4■■□□□ 1.5
NME3-204ENST00000563498 DUOX1Q9NRD9 1551 aa24.4■■□□□ 1.5
NME3-204ENST00000563498 RAD17O75943 681 aa24.39■■□□□ 1.49
NME3-204ENST00000563498 HOXB7P09629 217 aa24.39■■□□□ 1.49
NME3-204ENST00000563498 PLBD2Q8NHP8 589 aa24.39■■□□□ 1.49
NME3-204ENST00000563498 ABHD8Q96I13 439 aa24.39■■□□□ 1.49
NME3-204ENST00000563498 CHPF2Q9P2E5 772 aa24.39■■□□□ 1.49
NME3-204ENST00000563498 CELF2O95319 508 aaKnown RBP24.38■■□□□ 1.49
NME3-204ENST00000563498 GRM1Q13255 1194 aa24.38■■□□□ 1.49
NME3-204ENST00000563498 KRT24Q2M2I5 525 aa24.38■■□□□ 1.49
NME3-204ENST00000563498 GLIS2Q9BZE0 524 aaPredicted RBP24.38■■□□□ 1.49
NME3-204ENST00000563498 YDJCA8MPS7 323 aa24.37■■□□□ 1.49
NME3-204ENST00000563498 HIRAP54198 1017 aaPredicted RBP24.37■■□□□ 1.49
NME3-204ENST00000563498 DDX60Q8IY21 1712 aaKnown RBP24.37■■□□□ 1.49
NME3-204ENST00000563498 SF3B3Q15393 1217 aaKnown RBP24.36■■□□□ 1.49
NME3-204ENST00000563498 NEUROD2Q15784 382 aa24.36■■□□□ 1.49
NME3-204ENST00000563498 HDGFL1Q5TGJ6 251 aa24.36■■□□□ 1.49
NME3-204ENST00000563498 ANKRD13DQ6ZTN6 518 aa24.36■■□□□ 1.49
NME3-204ENST00000563498 CDC37L1Q7L3B6 337 aa24.36■■□□□ 1.49
NME3-204ENST00000563498 ISCA1Q9BUE6 129 aa24.36■■□□□ 1.49
NME3-204ENST00000563498 DBF4Q9UBU7 674 aaPredicted RBP24.36■■□□□ 1.49
NME3-204ENST00000563498 CNOT7Q9UIV1 285 aaKnown RBP24.36■■□□□ 1.49
NME3-204ENST00000563498 TRIM35Q9UPQ4 493 aa24.36■■□□□ 1.49
NME3-204ENST00000563498 MYBBP1AQ9BQG0 1328 aaKnown RBP24.35■■□□□ 1.49
NME3-204ENST00000563498 TAF1P21675 1872 aa24.35■■□□□ 1.49
NME3-204ENST00000563498 CCDC146Q8IYE0 955 aa24.35■■□□□ 1.49
NME3-204ENST00000563498 DPF2Q92785 391 aa24.35■■□□□ 1.49
NME3-204ENST00000563498 RUNDC1Q96C34 613 aa24.35■■□□□ 1.49
NME3-204ENST00000563498 H7C1D1 291 aa24.34■■□□□ 1.49
NME3-204ENST00000563498 CA12O43570 354 aa24.34■■□□□ 1.49
NME3-204ENST00000563498 AOC2O75106 756 aa24.34■■□□□ 1.49
NME3-204ENST00000563498 TRPM4Q8TD43 1214 aa24.34■■□□□ 1.49
NME3-204ENST00000563498 WASHC4Q2M389 1173 aa24.33■■□□□ 1.49
NME3-204ENST00000563498 FAM89AQ96GI7 184 aa24.33■■□□□ 1.49
NME3-204ENST00000563498 LAS1LQ9Y4W2 734 aaKnown RBP24.33■■□□□ 1.49
NME3-204ENST00000563498 BRPF1P55201 1214 aaPredicted RBP24.32■■□□□ 1.48
NME3-204ENST00000563498 MICALL2Q8IY33 904 aa24.32■■□□□ 1.48
NME3-204ENST00000563498 CELF1Q92879 486 aaKnown RBP24.32■■□□□ 1.48
NME3-204ENST00000563498 HYPKQ9NX55 129 aa24.32■■□□□ 1.48
NME3-204ENST00000563498 NSFL1CQ9UNZ2 370 aaKnown RBP24.32■■□□□ 1.48
NME3-204ENST00000563498 TRIM28Q13263 835 aaKnown RBP24.31■■□□□ 1.48
NME3-204ENST00000563498 WDR43Q15061 677 aaKnown RBP eCLIP24.3■■□□□ 1.48
NME3-204ENST00000563498 CFAP44Q96MT7 982 aa24.3■■□□□ 1.48
NME3-204ENST00000563498 ZNF408Q9H9D4 720 aa24.3■■□□□ 1.48
NME3-204ENST00000563498 SHTN1A0MZ66 631 aa24.29■■□□□ 1.48
NME3-204ENST00000563498 ATP5J2-PTCD1G3V325 749 aa24.29■■□□□ 1.48
NME3-204ENST00000563498 PSMD14O00487 310 aa24.29■■□□□ 1.48
NME3-204ENST00000563498 RPS12P25398 132 aaKnown RBP24.29■■□□□ 1.48
NME3-204ENST00000563498 ZBTB12Q9Y330 459 aaPredicted RBP24.29■■□□□ 1.48
NME3-204ENST00000563498 ZNF428Q96B54 188 aa24.28■■□□□ 1.48
NME3-204ENST00000563498 EYA3Q99504 573 aa24.28■■□□□ 1.48
NME3-204ENST00000563498 DBNDD1Q9H9R9 158 aa24.28■■□□□ 1.48
NME3-204ENST00000563498 POLLQ9UGP5 575 aa24.28■■□□□ 1.48
NME3-204ENST00000563498 C6orf229H3BNL8 230 aa24.27■■□□□ 1.48
NME3-204ENST00000563498 GPSM2P81274 684 aa24.27■■□□□ 1.48
NME3-204ENST00000563498 NOGQ13253 232 aa24.27■■□□□ 1.48
NME3-204ENST00000563498 DUSP27Q5VZP5 1158 aa24.27■■□□□ 1.48
NME3-204ENST00000563498 USP48Q86UV5 1035 aa24.27■■□□□ 1.48
NME3-204ENST00000563498 TSKSQ9UJT2 592 aa24.27■■□□□ 1.48
NME3-204ENST00000563498 IRS4O14654 1257 aaPredicted RBP24.26■■□□□ 1.47
NME3-204ENST00000563498 RPS8P62241 208 aaKnown RBP24.26■■□□□ 1.47
NME3-204ENST00000563498 SAMD7Q7Z3H4 446 aa24.26■■□□□ 1.47
NME3-204ENST00000563498 ADAMTS8Q9UP79 889 aa24.26■■□□□ 1.47
NME3-204ENST00000563498 COL4A1P02462 1669 aa24.26■■□□□ 1.47
NME3-204ENST00000563498 RIMBP2O15034 1052 aa24.25■■□□□ 1.47
NME3-204ENST00000563498 ECE2O60344 883 aa24.25■■□□□ 1.47
NME3-204ENST00000563498 HSP90B1P14625 803 aaKnown RBP24.25■■□□□ 1.47
NME3-204ENST00000563498 TBC1D16Q8TBP0 767 aa24.25■■□□□ 1.47
NME3-204ENST00000563498 HUNKP57058 714 aa24.24■■□□□ 1.47
NME3-204ENST00000563498 KRT26Q7Z3Y9 468 aa24.24■■□□□ 1.47
NME3-204ENST00000563498 ZBTB38Q8NAP3 1195 aaPredicted RBP24.24■■□□□ 1.47
NME3-204ENST00000563498 MBIPQ9NS73 344 aa24.24■■□□□ 1.47
NME3-204ENST00000563498 PODXL2Q9NZ53 605 aa24.24■■□□□ 1.47
NME3-204ENST00000563498 RTL9Q8NET4 1388 aa24.24■■□□□ 1.47
NME3-204ENST00000563498 DDX10Q13206 875 aaKnown RBP24.23■■□□□ 1.47
NME3-204ENST00000563498 TBC1D10BQ4KMP7 808 aaPredicted RBP24.23■■□□□ 1.47
NME3-204ENST00000563498 RTL5Q5HYW3 569 aaPredicted RBP24.23■■□□□ 1.47
NME3-204ENST00000563498 CCDC85CA6NKD9 419 aa24.22■■□□□ 1.47
NME3-204ENST00000563498 EGFRP00533 1210 aa24.22■■□□□ 1.47
NME3-204ENST00000563498 ZNF853P0CG23 659 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms