RNA–Protein interactions for RNA: ENST00000563293.1

RPAP1-205, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-205ENST00000563293 ZNRF3Q9ULT6 936 aa12.28□□□□□ -0.44
RPAP1-205ENST00000563293 TAF1P21675 1872 aa12.27□□□□□ -0.44
RPAP1-205ENST00000563293 RAD17O75943 681 aa12.27□□□□□ -0.45
RPAP1-205ENST00000563293 NTSR2O95665 410 aa12.27□□□□□ -0.45
RPAP1-205ENST00000563293 SOX10P56693 466 aa12.27□□□□□ -0.45
RPAP1-205ENST00000563293 LMOD3Q0VAK6 560 aa12.27□□□□□ -0.45
RPAP1-205ENST00000563293 TAF7Q15545 349 aaPredicted RBP12.27□□□□□ -0.45
RPAP1-205ENST00000563293 USP48Q86UV5 1035 aa12.27□□□□□ -0.45
RPAP1-205ENST00000563293 RTF1Q92541 710 aaKnown RBP12.27□□□□□ -0.45
RPAP1-205ENST00000563293 HHIPL1Q96JK4 782 aa12.27□□□□□ -0.45
RPAP1-205ENST00000563293 ATP6V0A2Q9Y487 856 aa12.27□□□□□ -0.45
RPAP1-205ENST00000563293 ZBED9Q6R2W3 1325 aa12.27□□□□□ -0.45
RPAP1-205ENST00000563293 LAMB4A4D0S4 1761 aa12.26□□□□□ -0.45
RPAP1-205ENST00000563293 YDJCA8MPS7 323 aa12.26□□□□□ -0.45
RPAP1-205ENST00000563293 FAM155AB1AL88 458 aaPredicted RBP12.26□□□□□ -0.45
RPAP1-205ENST00000563293 APAF1O14727 1248 aa12.26□□□□□ -0.45
RPAP1-205ENST00000563293 CA12O43570 354 aa12.26□□□□□ -0.45
RPAP1-205ENST00000563293 EGFRP00533 1210 aa12.25□□□□□ -0.45
RPAP1-205ENST00000563293 GRIPAP1Q4V328 841 aa12.25□□□□□ -0.45
RPAP1-205ENST00000563293 CCDC146Q8IYE0 955 aa12.25□□□□□ -0.45
RPAP1-205ENST00000563293 YTHDC1Q96MU7 727 aaKnown RBP12.25□□□□□ -0.45
RPAP1-205ENST00000563293 THUMPD2Q9BTF0 503 aaKnown RBP12.25□□□□□ -0.45
RPAP1-205ENST00000563293 RTFDC1Q9BY42 306 aaPredicted RBP12.25□□□□□ -0.45
RPAP1-205ENST00000563293 CNOT7Q9UIV1 285 aaKnown RBP12.25□□□□□ -0.45
RPAP1-205ENST00000563293 ABCC4O15439 1325 aa12.25□□□□□ -0.45
RPAP1-205ENST00000563293 HTATSF1O43719 755 aaKnown RBP12.24□□□□□ -0.45
RPAP1-205ENST00000563293 TMPOP42166 694 aaKnown RBP12.24□□□□□ -0.45
RPAP1-205ENST00000563293 HUNKP57058 714 aa12.24□□□□□ -0.45
RPAP1-205ENST00000563293 EIF4A1P60842 406 aaKnown RBP12.24□□□□□ -0.45
RPAP1-205ENST00000563293 CALD1Q05682 793 aaKnown RBP12.24□□□□□ -0.45
RPAP1-205ENST00000563293 NFE2L2Q16236 605 aa12.24□□□□□ -0.45
RPAP1-205ENST00000563293 KIF6Q6ZMV9 814 aa12.24□□□□□ -0.45
RPAP1-205ENST00000563293 CDC37L1Q7L3B6 337 aa12.24□□□□□ -0.45
RPAP1-205ENST00000563293 SAMD7Q7Z3H4 446 aa12.24□□□□□ -0.45
RPAP1-205ENST00000563293 ZNF428Q96B54 188 aa12.24□□□□□ -0.45
RPAP1-205ENST00000563293 ZBTB12Q9Y330 459 aaPredicted RBP12.24□□□□□ -0.45
RPAP1-205ENST00000563293 DLG5Q8TDM6 1919 aa12.23□□□□□ -0.45
RPAP1-205ENST00000563293 LAMB2P55268 1798 aa12.23□□□□□ -0.45
RPAP1-205ENST00000563293 KDM3BQ7LBC6 1761 aa12.23□□□□□ -0.45
RPAP1-205ENST00000563293 IBTKQ9P2D0 1353 aaPredicted RBP12.23□□□□□ -0.45
RPAP1-205ENST00000563293 CENPBP07199 599 aaPredicted RBP12.23□□□□□ -0.45
RPAP1-205ENST00000563293 SLC10A5Q5PT55 438 aa12.23□□□□□ -0.45
RPAP1-205ENST00000563293 GIGYF2Q6Y7W6 1299 aaKnown RBP12.23□□□□□ -0.45
RPAP1-205ENST00000563293 LRP10Q7Z4F1 713 aa12.23□□□□□ -0.45
RPAP1-205ENST00000563293 ZC3H15Q8WU90 426 aaKnown RBP12.23□□□□□ -0.45
RPAP1-205ENST00000563293 NLRP3Q96P20 1036 aa12.23□□□□□ -0.45
RPAP1-205ENST00000563293 BCL2L13Q9BXK5 485 aa12.23□□□□□ -0.45
RPAP1-205ENST00000563293 KCNQ5Q9NR82 932 aa12.23□□□□□ -0.45
RPAP1-205ENST00000563293 MKI67P46013 3256 aaKnown RBP12.23□□□□□ -0.45
RPAP1-205ENST00000563293 ADM5C9JUS6 153 aa12.22□□□□□ -0.45
RPAP1-205ENST00000563293 ANXA1P04083 346 aa12.22□□□□□ -0.45
RPAP1-205ENST00000563293 HCLS1P14317 486 aaPredicted RBP12.22□□□□□ -0.45
RPAP1-205ENST00000563293 RIPK4P57078 832 aa12.22□□□□□ -0.45
RPAP1-205ENST00000563293 KIF23Q02241 960 aaPredicted RBP12.22□□□□□ -0.45
RPAP1-205ENST00000563293 KIAA2012Q0VF49 1180 aa12.22□□□□□ -0.45
RPAP1-205ENST00000563293 NOGQ13253 232 aa12.22□□□□□ -0.45
RPAP1-205ENST00000563293 PDIA6Q15084 440 aa12.22□□□□□ -0.45
RPAP1-205ENST00000563293 PROSER3Q2NL68 480 aa12.22□□□□□ -0.45
RPAP1-205ENST00000563293 DPP8Q6V1X1 898 aaPredicted RBP12.22□□□□□ -0.45
RPAP1-205ENST00000563293 WDR63Q8IWG1 891 aa12.22□□□□□ -0.45
RPAP1-205ENST00000563293 SP8Q8IXZ3 490 aa12.22□□□□□ -0.45
RPAP1-205ENST00000563293 MICALL2Q8IY33 904 aa12.22□□□□□ -0.45
RPAP1-205ENST00000563293 VPS33BQ9H267 617 aa12.22□□□□□ -0.45
RPAP1-205ENST00000563293 RNF186Q9NXI6 227 aa12.22□□□□□ -0.45
RPAP1-205ENST00000563293 TRPA1O75762 1119 aa12.21□□□□□ -0.45
RPAP1-205ENST00000563293 RGMBQ6NW40 437 aa12.21□□□□□ -0.45
RPAP1-205ENST00000563293 MPNDQ8N594 471 aa12.21□□□□□ -0.45
RPAP1-205ENST00000563293 UTP14AQ9BVJ6 771 aaKnown RBP12.21□□□□□ -0.45
RPAP1-205ENST00000563293 COL4A1P02462 1669 aa12.21□□□□□ -0.45
RPAP1-205ENST00000563293 DUOX1Q9NRD9 1551 aa12.21□□□□□ -0.46
RPAP1-205ENST00000563293 ASTN2O75129 1339 aaPredicted RBP12.2□□□□□ -0.46
RPAP1-205ENST00000563293 PSMD14O00487 310 aa12.2□□□□□ -0.46
RPAP1-205ENST00000563293 BBOX1O75936 387 aa12.2□□□□□ -0.46
RPAP1-205ENST00000563293 TNIP1Q15025 636 aa12.2□□□□□ -0.46
RPAP1-205ENST00000563293 TBC1D10BQ4KMP7 808 aaPredicted RBP12.2□□□□□ -0.46
RPAP1-205ENST00000563293 PPP1R42Q7Z4L9 355 aa12.2□□□□□ -0.46
RPAP1-205ENST00000563293 WWC1Q8IX03 1113 aa12.2□□□□□ -0.46
RPAP1-205ENST00000563293 AKAP11Q9UKA4 1901 aa12.19□□□□□ -0.46
RPAP1-205ENST00000563293 IL16Q14005 1332 aa12.19□□□□□ -0.46
RPAP1-205ENST00000563293 ZNF521Q96K83 1311 aa12.19□□□□□ -0.46
RPAP1-205ENST00000563293 H7C1D1 291 aa12.19□□□□□ -0.46
RPAP1-205ENST00000563293 GOLGA2Q08379 1002 aa12.19□□□□□ -0.46
RPAP1-205ENST00000563293 RBM26Q5T8P6 1007 aaKnown RBP12.19□□□□□ -0.46
RPAP1-205ENST00000563293 SUPT20HQ8NEM7 779 aa12.19□□□□□ -0.46
RPAP1-205ENST00000563293 CSRNP1Q96S65 589 aa12.19□□□□□ -0.46
RPAP1-205ENST00000563293 GBA2Q9HCG7 927 aaPredicted RBP12.19□□□□□ -0.46
RPAP1-205ENST00000563293 ANKRD36CQ5JPF3 1778 aa12.19□□□□□ -0.46
RPAP1-205ENST00000563293 CENPFP49454 3210 aa12.18□□□□□ -0.46
RPAP1-205ENST00000563293 CDHR2Q9BYE9 1310 aa12.18□□□□□ -0.46
RPAP1-205ENST00000563293 E9PSI1 815 aa12.18□□□□□ -0.46
RPAP1-205ENST00000563293 ZNF157P51786 506 aaPredicted RBP12.18□□□□□ -0.46
RPAP1-205ENST00000563293 NEUROD2Q15784 382 aa12.18□□□□□ -0.46
RPAP1-205ENST00000563293 PARP10Q53GL7 1025 aa12.18□□□□□ -0.46
RPAP1-205ENST00000563293 KRT26Q7Z3Y9 468 aa12.18□□□□□ -0.46
RPAP1-205ENST00000563293 TMX4Q9H1E5 349 aaPredicted RBP12.18□□□□□ -0.46
RPAP1-205ENST00000563293 DBNDD1Q9H9R9 158 aa12.18□□□□□ -0.46
RPAP1-205ENST00000563293 RTL9Q8NET4 1388 aa12.18□□□□□ -0.46
RPAP1-205ENST00000563293 RIMBP2O15034 1052 aa12.17□□□□□ -0.46
RPAP1-205ENST00000563293 EIF2S2P20042 333 aaKnown RBP12.17□□□□□ -0.46
RPAP1-205ENST00000563293 NLRP10Q86W26 655 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms