RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 CDHR2Q9BYE9 1310 aa15.67■□□□□ 0.1
NSMCE1-204ENST00000563273 CACNA1SQ13698 1873 aa15.66■□□□□ 0.1
NSMCE1-204ENST00000563273 EXOSC9Q06265 439 aaKnown RBP15.66■□□□□ 0.1
NSMCE1-204ENST00000563273 FLIIQ13045 1269 aa15.66■□□□□ 0.1
NSMCE1-204ENST00000563273 GPC2Q8N158 579 aa15.66■□□□□ 0.1
NSMCE1-204ENST00000563273 SPINK5Q9NQ38 1064 aaPredicted RBP15.66■□□□□ 0.1
NSMCE1-204ENST00000563273 SALL2Q9Y467 1007 aaPredicted RBP15.66■□□□□ 0.1
NSMCE1-204ENST00000563273 ZNF541Q9H0D2 1346 aa15.66■□□□□ 0.1
NSMCE1-204ENST00000563273 CCER2I3L3R5 266 aa15.65■□□□□ 0.1
NSMCE1-204ENST00000563273 PDE8AO60658 829 aa15.65■□□□□ 0.1
NSMCE1-204ENST00000563273 IGKV5-2P06315 115 aa15.65■□□□□ 0.1
NSMCE1-204ENST00000563273 DPP8Q6V1X1 898 aaPredicted RBP15.65■□□□□ 0.1
NSMCE1-204ENST00000563273 LARGE2Q8N3Y3 721 aa15.65■□□□□ 0.1
NSMCE1-204ENST00000563273 MPNDQ8N594 471 aa15.65■□□□□ 0.1
NSMCE1-204ENST00000563273 EIF6P56537 245 aaKnown RBP15.64■□□□□ 0.09
NSMCE1-204ENST00000563273 G2E3Q7L622 706 aa15.64■□□□□ 0.09
NSMCE1-204ENST00000563273 DDX60Q8IY21 1712 aaKnown RBP15.63■□□□□ 0.09
NSMCE1-204ENST00000563273 NEURL1BA8MQ27 555 aa15.63■□□□□ 0.09
NSMCE1-204ENST00000563273 TCERG1O14776 1098 aaKnown RBP15.63■□□□□ 0.09
NSMCE1-204ENST00000563273 PPIP5K2O43314 1243 aa15.63■□□□□ 0.09
NSMCE1-204ENST00000563273 RPS8P62241 208 aaKnown RBP15.63■□□□□ 0.09
NSMCE1-204ENST00000563273 KIAA2012Q0VF49 1180 aa15.63■□□□□ 0.09
NSMCE1-204ENST00000563273 CCDC152Q4G0S7 254 aa15.63■□□□□ 0.09
NSMCE1-204ENST00000563273 NIM1KQ8IY84 436 aa15.63■□□□□ 0.09
NSMCE1-204ENST00000563273 CELF1Q92879 486 aaKnown RBP15.63■□□□□ 0.09
NSMCE1-204ENST00000563273 TAF1DQ9H5J8 278 aaPredicted RBP15.63■□□□□ 0.09
NSMCE1-204ENST00000563273 CCDC88AQ3V6T2 1871 aa15.63■□□□□ 0.09
NSMCE1-204ENST00000563273 FKBP5Q13451 457 aaPredicted RBP15.62■□□□□ 0.09
NSMCE1-204ENST00000563273 RTL5Q5HYW3 569 aaPredicted RBP15.62■□□□□ 0.09
NSMCE1-204ENST00000563273 SLC51AQ86UW1 340 aa15.62■□□□□ 0.09
NSMCE1-204ENST00000563273 DNAAF4Q8WXU2 420 aa15.62■□□□□ 0.09
NSMCE1-204ENST00000563273 HACL1Q9UJ83 578 aa15.62■□□□□ 0.09
NSMCE1-204ENST00000563273 COL4A5P29400 1685 aa15.62■□□□□ 0.09
NSMCE1-204ENST00000563273 LAMB2P55268 1798 aa15.62■□□□□ 0.09
NSMCE1-204ENST00000563273 RTL9Q8NET4 1388 aa15.62■□□□□ 0.09
NSMCE1-204ENST00000563273 E9PSI1 815 aa15.61■□□□□ 0.09
NSMCE1-204ENST00000563273 H7C1W4 665 aa15.61■□□□□ 0.09
NSMCE1-204ENST00000563273 AOC3Q16853 763 aa15.61■□□□□ 0.09
NSMCE1-204ENST00000563273 LDHDQ86WU2 507 aa15.61■□□□□ 0.09
NSMCE1-204ENST00000563273 LINS1Q8NG48 757 aa15.61■□□□□ 0.09
NSMCE1-204ENST00000563273 ZNF428Q96B54 188 aa15.61■□□□□ 0.09
NSMCE1-204ENST00000563273 PLA2G12BQ9BX93 195 aa15.61■□□□□ 0.09
NSMCE1-204ENST00000563273 PODXL2Q9NZ53 605 aa15.61■□□□□ 0.09
NSMCE1-204ENST00000563273 ZNRF3Q9ULT6 936 aa15.61■□□□□ 0.09
NSMCE1-204ENST00000563273 LRRC37AA6NMS7 1700 aa15.6■□□□□ 0.09
NSMCE1-204ENST00000563273 CTSWP56202 376 aa15.6■□□□□ 0.09
NSMCE1-204ENST00000563273 GCKRQ14397 625 aa15.6■□□□□ 0.09
NSMCE1-204ENST00000563273 CWF19L2Q2TBE0 894 aaKnown RBP15.6■□□□□ 0.09
NSMCE1-204ENST00000563273 CHADLQ6NUI6 762 aa15.6■□□□□ 0.09
NSMCE1-204ENST00000563273 PNMA8AQ86V59 439 aaPredicted RBP15.6■□□□□ 0.09
NSMCE1-204ENST00000563273 DNAJC5GQ8N7S2 189 aa15.59■□□□□ 0.09
NSMCE1-204ENST00000563273 DUOX1Q9NRD9 1551 aa15.58■□□□□ 0.09
NSMCE1-204ENST00000563273 EPHX2P34913 555 aa15.58■□□□□ 0.08
NSMCE1-204ENST00000563273 CASP7P55210 303 aa15.58■□□□□ 0.08
NSMCE1-204ENST00000563273 TTLL11Q8NHH1 800 aa15.58■□□□□ 0.08
NSMCE1-204ENST00000563273 CDC5LQ99459 802 aaKnown RBP15.58■□□□□ 0.08
NSMCE1-204ENST00000563273 SEC31BQ9NQW1 1179 aa15.58■□□□□ 0.08
NSMCE1-204ENST00000563273 SCN4AP35499 1836 aa15.58■□□□□ 0.08
NSMCE1-204ENST00000563273 LMOD1P29536 600 aaPredicted RBP15.57■□□□□ 0.08
NSMCE1-204ENST00000563273 SCNN1DP51172 638 aa15.57■□□□□ 0.08
NSMCE1-204ENST00000563273 GPSM2P81274 684 aa15.57■□□□□ 0.08
NSMCE1-204ENST00000563273 CXCL9Q07325 125 aa15.57■□□□□ 0.08
NSMCE1-204ENST00000563273 WASHC4Q2M389 1173 aa15.57■□□□□ 0.08
NSMCE1-204ENST00000563273 UBE3BQ7Z3V4 1068 aa15.57■□□□□ 0.08
NSMCE1-204ENST00000563273 ANKRD18AQ8IVF6 992 aa15.57■□□□□ 0.08
NSMCE1-204ENST00000563273 EYA3Q99504 573 aa15.57■□□□□ 0.08
NSMCE1-204ENST00000563273 NSFL1CQ9UNZ2 370 aaKnown RBP15.57■□□□□ 0.08
NSMCE1-204ENST00000563273 SLFN5Q08AF3 891 aa15.56■□□□□ 0.08
NSMCE1-204ENST00000563273 TNIP1Q15025 636 aa15.56■□□□□ 0.08
NSMCE1-204ENST00000563273 BEND3Q5T5X7 828 aa15.56■□□□□ 0.08
NSMCE1-204ENST00000563273 TBC1D16Q8TBP0 767 aa15.56■□□□□ 0.08
NSMCE1-204ENST00000563273 JARID2Q92833 1246 aaPredicted RBP15.56■□□□□ 0.08
NSMCE1-204ENST00000563273 POLLQ9UGP5 575 aa15.56■□□□□ 0.08
NSMCE1-204ENST00000563273 GJA3Q9Y6H8 435 aa15.56■□□□□ 0.08
NSMCE1-204ENST00000563273 CSF1RP07333 972 aa15.55■□□□□ 0.08
NSMCE1-204ENST00000563273 POTEIP0CG38 1075 aa15.55■□□□□ 0.08
NSMCE1-204ENST00000563273 POTEJP0CG39 1038 aa15.55■□□□□ 0.08
NSMCE1-204ENST00000563273 CIAPIN1Q6FI81 312 aa15.55■□□□□ 0.08
NSMCE1-204ENST00000563273 USP50Q70EL3 339 aaPredicted RBP15.55■□□□□ 0.08
NSMCE1-204ENST00000563273 BSDC1Q9NW68 430 aaPredicted RBP15.55■□□□□ 0.08
NSMCE1-204ENST00000563273 CACNA1FO60840 1977 aa15.55■□□□□ 0.08
NSMCE1-204ENST00000563273 COL4A1P02462 1669 aa15.54■□□□□ 0.08
NSMCE1-204ENST00000563273 XDHP47989 1333 aa15.54■□□□□ 0.08
NSMCE1-204ENST00000563273 PASKQ96RG2 1323 aa15.54■□□□□ 0.08
NSMCE1-204ENST00000563273 C6orf229H3BNL8 230 aa15.54■□□□□ 0.08
NSMCE1-204ENST00000563273 ALDH1L1O75891 902 aa15.54■□□□□ 0.08
NSMCE1-204ENST00000563273 TRMT2AQ8IZ69 625 aaKnown RBP15.54■□□□□ 0.08
NSMCE1-204ENST00000563273 KLRG1Q96E93 195 aa15.54■□□□□ 0.08
NSMCE1-204ENST00000563273 GREM2Q9H772 168 aa15.54■□□□□ 0.08
NSMCE1-204ENST00000563273 GPRC5DQ9NZD1 345 aa15.54■□□□□ 0.08
NSMCE1-204ENST00000563273 GGA1Q9UJY5 639 aa15.54■□□□□ 0.08
NSMCE1-204ENST00000563273 LTBP1Q14766 1721 aa15.54■□□□□ 0.08
NSMCE1-204ENST00000563273 YDJCA8MPS7 323 aa15.53■□□□□ 0.08
NSMCE1-204ENST00000563273 F6X3S4 739 aa15.53■□□□□ 0.08
NSMCE1-204ENST00000563273 CT47B1P0C2W7 299 aaPredicted RBP15.53■□□□□ 0.08
NSMCE1-204ENST00000563273 ADARB2Q9NS39 739 aaKnown RBP15.53■□□□□ 0.08
NSMCE1-204ENST00000563273 ANKIB1Q9P2G1 1089 aa15.53■□□□□ 0.08
NSMCE1-204ENST00000563273 ADAMTSL1Q8N6G6 1762 aa15.53■□□□□ 0.08
NSMCE1-204ENST00000563273 PTPRCP08575 1304 aa15.52■□□□□ 0.08
NSMCE1-204ENST00000563273 UFL1O94874 794 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms