RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 KIF13BQ9NQT8 1826 aa18.43■□□□□ 0.54
CDH11-207ENST00000563255 HSP90B1P14625 803 aaKnown RBP18.42■□□□□ 0.54
CDH11-207ENST00000563255 DDR1Q08345 913 aa18.42■□□□□ 0.54
CDH11-207ENST00000563255 HDAC1Q13547 482 aaPredicted RBP18.42■□□□□ 0.54
CDH11-207ENST00000563255 RABL6Q3YEC7 729 aaPredicted RBP18.42■□□□□ 0.54
CDH11-207ENST00000563255 TPTE2Q6XPS3 522 aa18.42■□□□□ 0.54
CDH11-207ENST00000563255 JARID2Q92833 1246 aaPredicted RBP18.42■□□□□ 0.54
CDH11-207ENST00000563255 RWDD1Q9H446 243 aaPredicted RBP18.42■□□□□ 0.54
CDH11-207ENST00000563255 HTRA3P83110 453 aa18.41■□□□□ 0.54
CDH11-207ENST00000563255 FOXO4P98177 505 aa18.41■□□□□ 0.54
CDH11-207ENST00000563255 DALRD3Q5D0E6 543 aaKnown RBP18.41■□□□□ 0.54
CDH11-207ENST00000563255 RTL5Q5HYW3 569 aaPredicted RBP18.41■□□□□ 0.54
CDH11-207ENST00000563255 SLC10A5Q5PT55 438 aa18.41■□□□□ 0.54
CDH11-207ENST00000563255 SIRT2Q8IXJ6 389 aa18.41■□□□□ 0.54
CDH11-207ENST00000563255 BICC1Q9H694 974 aaKnown RBP18.41■□□□□ 0.54
CDH11-207ENST00000563255 NMRK2Q9NPI5 230 aa18.41■□□□□ 0.54
CDH11-207ENST00000563255 ANKRD31Q8N7Z5 1873 aa18.4■□□□□ 0.54
CDH11-207ENST00000563255 FAM177BA6PVY3 158 aa18.4■□□□□ 0.54
CDH11-207ENST00000563255 IRS4O14654 1257 aaPredicted RBP18.4■□□□□ 0.54
CDH11-207ENST00000563255 PDE8AO60658 829 aa18.4■□□□□ 0.54
CDH11-207ENST00000563255 C9orf131Q5VYM1 1079 aa18.4■□□□□ 0.54
CDH11-207ENST00000563255 B4GALNT3Q6L9W6 998 aa18.4■□□□□ 0.54
CDH11-207ENST00000563255 NBPF5PQ86XG9 351 aaPredicted RBP18.4■□□□□ 0.54
CDH11-207ENST00000563255 RIC1Q4ADV7 1423 aa18.4■□□□□ 0.54
CDH11-207ENST00000563255 POLRMTO00411 1230 aaKnown RBP18.39■□□□□ 0.53
CDH11-207ENST00000563255 HMMRO75330 724 aa18.39■□□□□ 0.53
CDH11-207ENST00000563255 CHRNA5P30532 468 aa18.39■□□□□ 0.53
CDH11-207ENST00000563255 EPHA10Q5JZY3 1008 aa18.39■□□□□ 0.53
CDH11-207ENST00000563255 SYNE4Q8N205 404 aa18.39■□□□□ 0.53
CDH11-207ENST00000563255 SSH3Q8TE77 659 aa18.39■□□□□ 0.53
CDH11-207ENST00000563255 TOMM70O94826 608 aa18.38■□□□□ 0.53
CDH11-207ENST00000563255 IGHDP01880 384 aa18.38■□□□□ 0.53
CDH11-207ENST00000563255 SERPINB2P05120 415 aa18.38■□□□□ 0.53
CDH11-207ENST00000563255 CSF1RP07333 972 aa18.38■□□□□ 0.53
CDH11-207ENST00000563255 GTF2E1P29083 439 aaPredicted RBP18.38■□□□□ 0.53
CDH11-207ENST00000563255 APLP1P51693 650 aa18.38■□□□□ 0.53
CDH11-207ENST00000563255 POLA2Q14181 598 aa18.38■□□□□ 0.53
CDH11-207ENST00000563255 ERFEQ4G0M1 354 aa18.38■□□□□ 0.53
CDH11-207ENST00000563255 NUTM1Q86Y26 1132 aa18.38■□□□□ 0.53
CDH11-207ENST00000563255 TNRC6CQ9HCJ0 1690 aaKnown RBP18.38■□□□□ 0.53
CDH11-207ENST00000563255 PNMA6EA0A0J9YXQ4 647 aa18.37■□□□□ 0.53
CDH11-207ENST00000563255 WDR90Q96KV7 1748 aa18.37■□□□□ 0.53
CDH11-207ENST00000563255 SPEF2Q9C093 1822 aa18.37■□□□□ 0.53
CDH11-207ENST00000563255 SRGAP3O43295 1099 aa18.36■□□□□ 0.53
CDH11-207ENST00000563255 CAPN15O75808 1086 aa18.36■□□□□ 0.53
CDH11-207ENST00000563255 TAF1P21675 1872 aa18.36■□□□□ 0.53
CDH11-207ENST00000563255 LMBR1LQ6UX01 489 aa18.36■□□□□ 0.53
CDH11-207ENST00000563255 CNBD1Q8NA66 436 aa18.36■□□□□ 0.53
CDH11-207ENST00000563255 KDM2BQ8NHM5 1336 aa18.36■□□□□ 0.53
CDH11-207ENST00000563255 HCLS1P14317 486 aaPredicted RBP18.35■□□□□ 0.53
CDH11-207ENST00000563255 CTSWP56202 376 aa18.35■□□□□ 0.53
CDH11-207ENST00000563255 PRR5LQ6MZQ0 368 aa18.35■□□□□ 0.53
CDH11-207ENST00000563255 CENPQQ7L2Z9 268 aaPredicted RBP18.35■□□□□ 0.53
CDH11-207ENST00000563255 TTLL11Q8NHH1 800 aa18.35■□□□□ 0.53
CDH11-207ENST00000563255 RNF181Q9P0P0 153 aa18.35■□□□□ 0.53
CDH11-207ENST00000563255 ABCC12Q96J65 1359 aa18.34■□□□□ 0.53
CDH11-207ENST00000563255 ST5P78524 1137 aa18.34■□□□□ 0.53
CDH11-207ENST00000563255 C16orf71Q8IYS4 520 aaPredicted RBP18.34■□□□□ 0.53
CDH11-207ENST00000563255 GCC1Q96CN9 775 aa18.34■□□□□ 0.53
CDH11-207ENST00000563255 DCTPP1Q9H773 170 aa18.34■□□□□ 0.53
CDH11-207ENST00000563255 BRCA1P38398 1863 aaKnown RBP18.33■□□□□ 0.53
CDH11-207ENST00000563255 RTL9Q8NET4 1388 aa18.33■□□□□ 0.53
CDH11-207ENST00000563255 NPHP1O15259 732 aa18.33■□□□□ 0.52
CDH11-207ENST00000563255 SF3B3Q15393 1217 aaKnown RBP18.33■□□□□ 0.52
CDH11-207ENST00000563255 SMC5Q8IY18 1101 aa18.33■□□□□ 0.52
CDH11-207ENST00000563255 DNAJC5GQ8N7S2 189 aa18.33■□□□□ 0.52
CDH11-207ENST00000563255 NLRP3Q96P20 1036 aa18.33■□□□□ 0.52
CDH11-207ENST00000563255 RFX5P48382 616 aaPredicted RBP18.32■□□□□ 0.52
CDH11-207ENST00000563255 CCDC152Q4G0S7 254 aa18.32■□□□□ 0.52
CDH11-207ENST00000563255 CCDC57Q2TAC2 916 aa18.31■□□□□ 0.52
CDH11-207ENST00000563255 COPRSQ9NQ92 184 aa18.31■□□□□ 0.52
CDH11-207ENST00000563255 NOP58Q9Y2X3 529 aaKnown RBP18.31■□□□□ 0.52
CDH11-207ENST00000563255 A0A1B0GUL6 1792 aa18.3■□□□□ 0.52
CDH11-207ENST00000563255 DLEC1Q9Y238 1755 aa18.3■□□□□ 0.52
CDH11-207ENST00000563255 PTPN12Q05209 780 aaKnown RBP18.3■□□□□ 0.52
CDH11-207ENST00000563255 IFIT5Q13325 482 aaKnown RBP18.3■□□□□ 0.52
CDH11-207ENST00000563255 RRAGCQ9HB90 399 aa18.3■□□□□ 0.52
CDH11-207ENST00000563255 CHMP3Q9Y3E7 222 aa18.3■□□□□ 0.52
CDH11-207ENST00000563255 ARFGEF1Q9Y6D6 1849 aa18.3■□□□□ 0.52
CDH11-207ENST00000563255 CACNA1SQ13698 1873 aa18.29■□□□□ 0.52
CDH11-207ENST00000563255 ANKRD18BA2A2Z9 1011 aa18.29■□□□□ 0.52
CDH11-207ENST00000563255 KLRG2A4D1S0 409 aaPredicted RBP18.29■□□□□ 0.52
CDH11-207ENST00000563255 ITGA6P23229 1130 aa18.29■□□□□ 0.52
CDH11-207ENST00000563255 FAM161AQ3B820 660 aa18.29■□□□□ 0.52
CDH11-207ENST00000563255 HSP90AB4PQ58FF6 505 aa18.29■□□□□ 0.52
CDH11-207ENST00000563255 RBM46Q8TBY0 533 aaKnown RBP18.29■□□□□ 0.52
CDH11-207ENST00000563255 BRIP1Q9BX63 1249 aa18.29■□□□□ 0.52
CDH11-207ENST00000563255 GREM2Q9H772 168 aa18.29■□□□□ 0.52
CDH11-207ENST00000563255 FBXO3Q9UK99 471 aa18.29■□□□□ 0.52
CDH11-207ENST00000563255 COL11A2P13942 1736 aaPredicted RBP18.29■□□□□ 0.52
CDH11-207ENST00000563255 SURF6O75683 361 aaKnown RBP18.28■□□□□ 0.52
CDH11-207ENST00000563255 COL13A1Q5TAT6 717 aaPredicted RBP18.28■□□□□ 0.52
CDH11-207ENST00000563255 CCDC24Q8N4L8 307 aa18.28■□□□□ 0.52
CDH11-207ENST00000563255 RAB11FIP3O75154 756 aa18.27■□□□□ 0.52
CDH11-207ENST00000563255 CRY2Q49AN0 593 aa18.27■□□□□ 0.52
CDH11-207ENST00000563255 C3orf67Q6ZVT6 689 aa18.27■□□□□ 0.52
CDH11-207ENST00000563255 C2CD5Q86YS7 1000 aa18.27■□□□□ 0.52
CDH11-207ENST00000563255 TTLL6Q8N841 843 aa18.27■□□□□ 0.52
CDH11-207ENST00000563255 PCNTO95613 3336 aa18.26■□□□□ 0.51
CDH11-207ENST00000563255 H0YIN7 160 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms