RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 ADD2P35612 726 aa5.78□□□□□ -1.48
SMG1-207ENST00000563235 TNNT2P45379 298 aaPredicted RBP5.78□□□□□ -1.48
SMG1-207ENST00000563235 TKFCQ3LXA3 575 aa5.78□□□□□ -1.48
SMG1-207ENST00000563235 DEPDC4Q8N2C3 294 aa5.78□□□□□ -1.48
SMG1-207ENST00000563235 FRS2Q8WU20 508 aa5.78□□□□□ -1.48
SMG1-207ENST00000563235 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.78□□□□□ -1.488e-9■■■□□ 16.8
SMG1-207ENST00000563235 RANBP17Q9H2T7 1088 aaKnown RBP5.78□□□□□ -1.48
SMG1-207ENST00000563235 TOP2BQ02880 1626 aa5.78□□□□□ -1.48
SMG1-207ENST00000563235 ESYT3A0FGR9 886 aa5.78□□□□□ -1.48
SMG1-207ENST00000563235 TTLL13PA6NNM8 815 aa5.78□□□□□ -1.48
SMG1-207ENST00000563235 NR1I2O75469 434 aa5.78□□□□□ -1.48
SMG1-207ENST00000563235 EPB42P16452 691 aa5.78□□□□□ -1.48
SMG1-207ENST00000563235 NUTM2GQ5VZR2 741 aa5.78□□□□□ -1.48
SMG1-207ENST00000563235 RGL4Q8IZJ4 473 aa5.78□□□□□ -1.48
SMG1-207ENST00000563235 SPICE1Q8N0Z3 855 aa5.78□□□□□ -1.48
SMG1-207ENST00000563235 DUSP9Q99956 384 aaKnown RBP5.78□□□□□ -1.48
SMG1-207ENST00000563235 C22orf23Q9BZE7 217 aa5.78□□□□□ -1.48
SMG1-207ENST00000563235 FAM13BQ9NYF5 915 aa5.78□□□□□ -1.48
SMG1-207ENST00000563235 PABPN1LA6NDY0 278 aaKnown RBP5.77□□□□□ -1.49
SMG1-207ENST00000563235 CCDC85CA6NKD9 419 aa5.77□□□□□ -1.49
SMG1-207ENST00000563235 FIBPO43427 364 aa5.77□□□□□ -1.49
SMG1-207ENST00000563235 HOXC13P31276 330 aa5.77□□□□□ -1.49
SMG1-207ENST00000563235 IFT88Q13099 833 aa5.77□□□□□ -1.49
SMG1-207ENST00000563235 RIC3Q7Z5B4 369 aa5.77□□□□□ -1.49
SMG1-207ENST00000563235 UBE2Q1Q7Z7E8 422 aa5.77□□□□□ -1.49
SMG1-207ENST00000563235 CLASRPQ8N2M8 674 aaKnown RBP5.77□□□□□ -1.49
SMG1-207ENST00000563235 SLX1AQ9BQ83 275 aa5.77□□□□□ -1.49
SMG1-207ENST00000563235 LGR6Q9HBX8 967 aa5.77□□□□□ -1.49
SMG1-207ENST00000563235 NGRNQ9NPE2 291 aaKnown RBP5.77□□□□□ -1.49
SMG1-207ENST00000563235 ODF2LQ9ULJ1 636 aa5.77□□□□□ -1.49
SMG1-207ENST00000563235 USP17L15C9J2P7 530 aa5.77□□□□□ -1.49
SMG1-207ENST00000563235 USP17L10C9JJH3 530 aa5.77□□□□□ -1.49
SMG1-207ENST00000563235 USP17L13C9JLJ4 530 aa5.77□□□□□ -1.49
SMG1-207ENST00000563235 USP17L12C9JPN9 530 aa5.77□□□□□ -1.49
SMG1-207ENST00000563235 USP17L11C9JVI0 530 aa5.77□□□□□ -1.49
SMG1-207ENST00000563235 USP17L21D6R901 530 aa5.77□□□□□ -1.49
SMG1-207ENST00000563235 USP17L18D6R9N7 530 aa5.77□□□□□ -1.49
SMG1-207ENST00000563235 USP17L22D6RA61 530 aa5.77□□□□□ -1.49
SMG1-207ENST00000563235 USP17L17D6RBQ6 530 aa5.77□□□□□ -1.49
SMG1-207ENST00000563235 USP17L19D6RCP7 530 aa5.77□□□□□ -1.49
SMG1-207ENST00000563235 USP17L20D6RJB6 530 aa5.77□□□□□ -1.49
SMG1-207ENST00000563235 PRPF3O43395 683 aaKnown RBP5.77□□□□□ -1.49
SMG1-207ENST00000563235 EIF5P55010 431 aaKnown RBP5.77□□□□□ -1.49
SMG1-207ENST00000563235 NLRP6P59044 892 aa5.77□□□□□ -1.49
SMG1-207ENST00000563235 USP17L24Q0WX57 530 aa5.77□□□□□ -1.49
SMG1-207ENST00000563235 LSM14AQ8ND56 463 aaKnown RBP5.77□□□□□ -1.49
SMG1-207ENST00000563235 TTC8Q8TAM2 541 aa5.77□□□□□ -1.49
SMG1-207ENST00000563235 EPS8L1Q8TE68 723 aa5.77□□□□□ -1.49
SMG1-207ENST00000563235 MS4A4AQ96JQ5 239 aa5.77□□□□□ -1.49
SMG1-207ENST00000563235 C9orf78Q9NZ63 289 aaPredicted RBP5.77□□□□□ -1.49
SMG1-207ENST00000563235 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.77□□□□□ -1.49
SMG1-207ENST00000563235 DDX41Q9UJV9 622 aaKnown RBP5.77□□□□□ -1.49
SMG1-207ENST00000563235 CFTRP13569 1480 aa5.76□□□□□ -1.49
SMG1-207ENST00000563235 NAP1L1P55209 391 aaKnown RBP5.76□□□□□ -1.49
SMG1-207ENST00000563235 PDXDC2PQ6P474 469 aa5.76□□□□□ -1.49
SMG1-207ENST00000563235 KIAA0907Q7Z7F0 614 aaPredicted RBP5.76□□□□□ -1.49
SMG1-207ENST00000563235 SNX32Q86XE0 403 aa5.76□□□□□ -1.49
SMG1-207ENST00000563235 ZSCAN29Q8IWY8 852 aaPredicted RBP5.76□□□□□ -1.49
SMG1-207ENST00000563235 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.76□□□□□ -1.49
SMG1-207ENST00000563235 PLPP6Q8IY26 295 aa5.76□□□□□ -1.49
SMG1-207ENST00000563235 JPH3Q8WXH2 748 aaPredicted RBP5.76□□□□□ -1.49
SMG1-207ENST00000563235 GPR101Q96P66 508 aaPredicted RBP5.76□□□□□ -1.49
SMG1-207ENST00000563235 MRS2Q9HD23 443 aa5.76□□□□□ -1.49
SMG1-207ENST00000563235 RIC8AQ9NPQ8 531 aa5.76□□□□□ -1.49
SMG1-207ENST00000563235 SNTG2Q9NY99 539 aa5.76□□□□□ -1.49
SMG1-207ENST00000563235 SPG7Q9UQ90 795 aa5.76□□□□□ -1.49
SMG1-207ENST00000563235 CHMP3Q9Y3E7 222 aa5.76□□□□□ -1.49
SMG1-207ENST00000563235 PRRT4C9JH25 899 aa5.76□□□□□ -1.49
SMG1-207ENST00000563235 IPO5O00410 1097 aaKnown RBP5.76□□□□□ -1.49
SMG1-207ENST00000563235 ECEL1O95672 775 aa5.76□□□□□ -1.49
SMG1-207ENST00000563235 GLULP15104 373 aa5.76□□□□□ -1.49
SMG1-207ENST00000563235 PIK3CAP42336 1068 aa5.76□□□□□ -1.49
SMG1-207ENST00000563235 RAB27AP51159 221 aa5.76□□□□□ -1.49
SMG1-207ENST00000563235 HMGN5P82970 282 aaKnown RBP5.76□□□□□ -1.49
SMG1-207ENST00000563235 MCL1Q07820 350 aa5.76□□□□□ -1.49
SMG1-207ENST00000563235 COL19A1Q14993 1142 aa5.76□□□□□ -1.49
SMG1-207ENST00000563235 GJC2Q5T442 439 aaPredicted RBP5.76□□□□□ -1.49
SMG1-207ENST00000563235 ANKRD13BQ86YJ7 626 aa5.76□□□□□ -1.49
SMG1-207ENST00000563235 VTI1BQ9UEU0 232 aa5.76□□□□□ -1.49
SMG1-207ENST00000563235 ATP8A1Q9Y2Q0 1164 aa5.76□□□□□ -1.49
SMG1-207ENST00000563235 ABCC10Q5T3U5 1492 aa5.76□□□□□ -1.49
SMG1-207ENST00000563235 ABCC8Q09428 1581 aa5.76□□□□□ -1.49
SMG1-207ENST00000563235 ZNF132P52740 706 aa5.75□□□□□ -1.49
SMG1-207ENST00000563235 CHMP4BP1P59074 171 aa5.75□□□□□ -1.49
SMG1-207ENST00000563235 C16orf87Q6PH81 154 aa5.75□□□□□ -1.49
SMG1-207ENST00000563235 TMC7Q7Z402 723 aa5.75□□□□□ -1.49
SMG1-207ENST00000563235 METTL3Q86U44 580 aaKnown RBP5.75□□□□□ -1.49
SMG1-207ENST00000563235 MYO1HQ8N1T3 1032 aa5.75□□□□□ -1.49
SMG1-207ENST00000563235 TTC14Q96N46 770 aa5.75□□□□□ -1.49
SMG1-207ENST00000563235 RABL2BQ9UNT1 228 aa5.75□□□□□ -1.49
SMG1-207ENST00000563235 TRPC6Q9Y210 931 aa5.75□□□□□ -1.49
SMG1-207ENST00000563235 SORBS3O60504 671 aa5.75□□□□□ -1.49
SMG1-207ENST00000563235 OAS2P29728 719 aaKnown RBP5.75□□□□□ -1.49
SMG1-207ENST00000563235 SLC4A3P48751 1232 aa5.75□□□□□ -1.49
SMG1-207ENST00000563235 LCE2DQ5TA82 110 aaPredicted RBP5.75□□□□□ -1.49
SMG1-207ENST00000563235 ANO1Q5XXA6 986 aa5.75□□□□□ -1.49
SMG1-207ENST00000563235 IL31Q6EBC2 164 aa5.75□□□□□ -1.49
SMG1-207ENST00000563235 MICALL1Q8N3F8 863 aa5.75□□□□□ -1.49
SMG1-207ENST00000563235 SKA1Q96BD8 255 aa5.75□□□□□ -1.49
SMG1-207ENST00000563235 PAWRQ96IZ0 340 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms