RNA–Protein interactions for RNA: ENST00000562958.6

CNN2-205, Transcript of calponin 2, humanhuman

TSL 2 BASIC

Gene CNN2, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-205ENST00000562958 BOLA2Q9H3K6 86 aa17.22■□□□□ 0.35
CNN2-205ENST00000562958 CFAP45Q9UL16 551 aa17.22■□□□□ 0.35
CNN2-205ENST00000562958 AP5Z1O43299 807 aa17.22■□□□□ 0.35
CNN2-205ENST00000562958 LIG1P18858 919 aa17.22■□□□□ 0.35
CNN2-205ENST00000562958 CHMP4CQ96CF2 233 aa17.22■□□□□ 0.35
CNN2-205ENST00000562958 LLPHQ9BRT6 129 aaKnown RBP17.22■□□□□ 0.35
CNN2-205ENST00000562958 MYH15Q9Y2K3 1946 aa17.21■□□□□ 0.35
CNN2-205ENST00000562958 HMGB1P09429 215 aaKnown RBP17.21■□□□□ 0.35
CNN2-205ENST00000562958 TRHP20396 242 aaPredicted RBP17.21■□□□□ 0.35
CNN2-205ENST00000562958 ANKRD24Q8TF21 1146 aa17.21■□□□□ 0.35
CNN2-205ENST00000562958 DACT1Q9NYF0 836 aa17.21■□□□□ 0.35
CNN2-205ENST00000562958 C5P01031 1676 aa17.21■□□□□ 0.35
CNN2-205ENST00000562958 ZNF142P52746 1687 aaPredicted RBP17.21■□□□□ 0.35
CNN2-205ENST00000562958 NEURL1BA8MQ27 555 aa17.21■□□□□ 0.34
CNN2-205ENST00000562958 GCP02774 474 aa17.21■□□□□ 0.34
CNN2-205ENST00000562958 CDC25BP30305 580 aa17.21■□□□□ 0.34
CNN2-205ENST00000562958 PDIA6Q15084 440 aa17.21■□□□□ 0.34
CNN2-205ENST00000562958 NEK1Q96PY6 1258 aa17.21■□□□□ 0.34
CNN2-205ENST00000562958 CTAGE5O15320 804 aa17.2■□□□□ 0.34
CNN2-205ENST00000562958 IGKV5-2P06315 115 aa17.2■□□□□ 0.34
CNN2-205ENST00000562958 GCKRQ14397 625 aa17.2■□□□□ 0.34
CNN2-205ENST00000562958 TPRNQ4KMQ1 711 aa17.2■□□□□ 0.34
CNN2-205ENST00000562958 ATL3Q6DD88 541 aa17.2■□□□□ 0.34
CNN2-205ENST00000562958 FERMT3Q86UX7 667 aa17.2■□□□□ 0.34
CNN2-205ENST00000562958 METTL22Q9BUU2 404 aaPredicted RBP17.2■□□□□ 0.34
CNN2-205ENST00000562958 CBX8Q9HC52 389 aa17.2■□□□□ 0.34
CNN2-205ENST00000562958 TLR7Q9NYK1 1049 aaKnown RBP17.2■□□□□ 0.34
CNN2-205ENST00000562958 MST1RQ04912 1400 aa17.2■□□□□ 0.34
CNN2-205ENST00000562958 ESCO1Q5FWF5 840 aa17.19■□□□□ 0.34
CNN2-205ENST00000562958 PLA2G4DQ86XP0 818 aa17.19■□□□□ 0.34
CNN2-205ENST00000562958 PYCARDQ9ULZ3 195 aa17.19■□□□□ 0.34
CNN2-205ENST00000562958 TRPM3Q9HCF6 1732 aaPredicted RBP17.19■□□□□ 0.34
CNN2-205ENST00000562958 KIF1AQ12756 1690 aa17.19■□□□□ 0.34
CNN2-205ENST00000562958 RESTQ13127 1097 aa17.19■□□□□ 0.34
CNN2-205ENST00000562958 SYCP1Q15431 976 aa17.19■□□□□ 0.34
CNN2-205ENST00000562958 ANO6Q4KMQ2 910 aa17.19■□□□□ 0.34
CNN2-205ENST00000562958 ZNF589Q86UQ0 364 aaPredicted RBP17.18■□□□□ 0.34
CNN2-205ENST00000562958 MPNDQ8N594 471 aa17.18■□□□□ 0.34
CNN2-205ENST00000562958 AFDNP55196 1824 aaKnown RBP17.18■□□□□ 0.34
CNN2-205ENST00000562958 ZBTB7CA1YPR0 619 aa17.18■□□□□ 0.34
CNN2-205ENST00000562958 ZNF75DP51815 510 aa17.18■□□□□ 0.34
CNN2-205ENST00000562958 ANKLE2Q86XL3 938 aa17.18■□□□□ 0.34
CNN2-205ENST00000562958 BICD2Q8TD16 824 aa17.18■□□□□ 0.34
CNN2-205ENST00000562958 H3BQV1 296 aa17.17■□□□□ 0.34
CNN2-205ENST00000562958 CTIFO43310 598 aaKnown RBP17.17■□□□□ 0.34
CNN2-205ENST00000562958 RABL6Q3YEC7 729 aaPredicted RBP17.17■□□□□ 0.34
CNN2-205ENST00000562958 TNNI3KQ59H18 835 aa17.17■□□□□ 0.34
CNN2-205ENST00000562958 IFFO2Q5TF58 517 aa17.17■□□□□ 0.34
CNN2-205ENST00000562958 NAA16Q6N069 864 aaPredicted RBP17.17■□□□□ 0.34
CNN2-205ENST00000562958 ZNF790Q6PG37 636 aa17.17■□□□□ 0.34
CNN2-205ENST00000562958 ZNF710Q8N1W2 664 aa17.17■□□□□ 0.34
CNN2-205ENST00000562958 SPC24Q8NBT2 197 aa17.17■□□□□ 0.34
CNN2-205ENST00000562958 DDX54Q8TDD1 881 aaKnown RBP17.17■□□□□ 0.34
CNN2-205ENST00000562958 FPGT-TNNI3KV9GXZ4 949 aa17.17■□□□□ 0.34
CNN2-205ENST00000562958 SH3TC1Q8TE82 1336 aa17.17■□□□□ 0.34
CNN2-205ENST00000562958 NEMFO60524 1076 aa17.16■□□□□ 0.34
CNN2-205ENST00000562958 CAMK4Q16566 473 aa17.16■□□□□ 0.34
CNN2-205ENST00000562958 MCMDC2Q4G0Z9 681 aa17.16■□□□□ 0.34
CNN2-205ENST00000562958 SARM1Q6SZW1 724 aa17.16■□□□□ 0.34
CNN2-205ENST00000562958 LUZP1Q86V48 1076 aa17.16■□□□□ 0.34
CNN2-205ENST00000562958 C17orf53Q8N3J3 647 aaPredicted RBP17.16■□□□□ 0.34
CNN2-205ENST00000562958 SMARCC2Q8TAQ2 1214 aa17.16■□□□□ 0.34
CNN2-205ENST00000562958 SIL1Q9H173 461 aa17.16■□□□□ 0.34
CNN2-205ENST00000562958 AIMP1Q12904 312 aaKnown RBP17.16■□□□□ 0.34
CNN2-205ENST00000562958 HAUS7Q99871 368 aa17.16■□□□□ 0.34
CNN2-205ENST00000562958 SLC52A2Q9HAB3 445 aa17.16■□□□□ 0.34
CNN2-205ENST00000562958 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.16■□□□□ 0.34
CNN2-205ENST00000562958 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.16■□□□□ 0.34
CNN2-205ENST00000562958 PRAMEF22A3QJZ6 481 aa17.15■□□□□ 0.34
CNN2-205ENST00000562958 PTGS1P23219 599 aa17.15■□□□□ 0.34
CNN2-205ENST00000562958 RFX5P48382 616 aaPredicted RBP17.15■□□□□ 0.34
CNN2-205ENST00000562958 ZNF165P49910 485 aa17.15■□□□□ 0.34
CNN2-205ENST00000562958 BRF1Q92994 677 aa17.15■□□□□ 0.34
CNN2-205ENST00000562958 TRIM5Q9C035 493 aa17.15■□□□□ 0.34
CNN2-205ENST00000562958 BCL2L12Q9HB09 334 aa17.15■□□□□ 0.34
CNN2-205ENST00000562958 PALLDQ8WX93 1383 aa17.15■□□□□ 0.34
CNN2-205ENST00000562958 SPEF2Q9C093 1822 aa17.15■□□□□ 0.34
CNN2-205ENST00000562958 PFKFB2O60825 505 aa17.15■□□□□ 0.34
CNN2-205ENST00000562958 CKAP2LQ8IYA6 745 aa17.15■□□□□ 0.34
CNN2-205ENST00000562958 DBNLQ9UJU6 430 aaKnown RBP17.15■□□□□ 0.34
CNN2-205ENST00000562958 ARFGEF2Q9Y6D5 1785 aa17.15■□□□□ 0.34
CNN2-205ENST00000562958 ZNF609O15014 1411 aa17.14■□□□□ 0.33
CNN2-205ENST00000562958 FAM173BQ6P4H8 233 aa17.14■□□□□ 0.33
CNN2-205ENST00000562958 Q6ZUG5 572 aa17.14■□□□□ 0.33
CNN2-205ENST00000562958 DRC7Q8IY82 874 aa17.14■□□□□ 0.33
CNN2-205ENST00000562958 XAGE3Q8WTP9 111 aa17.14■□□□□ 0.33
CNN2-205ENST00000562958 ANKRD7Q92527 254 aa17.14■□□□□ 0.33
CNN2-205ENST00000562958 PGBD1Q96JS3 809 aa17.14■□□□□ 0.33
CNN2-205ENST00000562958 MYD88Q99836 296 aa17.14■□□□□ 0.33
CNN2-205ENST00000562958 TFIP11Q9UBB9 837 aaKnown RBP17.14■□□□□ 0.33
CNN2-205ENST00000562958 PAXBP1Q9Y5B6 917 aa17.14■□□□□ 0.33
CNN2-205ENST00000562958 LAMB4A4D0S4 1761 aa17.14■□□□□ 0.33
CNN2-205ENST00000562958 LAMA4Q16363 1823 aa17.14■□□□□ 0.33
CNN2-205ENST00000562958 SMTNL1A8MU46 457 aa17.13■□□□□ 0.33
CNN2-205ENST00000562958 RIOK3O14730 519 aaKnown RBP17.13■□□□□ 0.33
CNN2-205ENST00000562958 HSP90B1P14625 803 aaKnown RBP17.13■□□□□ 0.33
CNN2-205ENST00000562958 PTPN12Q05209 780 aaKnown RBP17.13■□□□□ 0.33
CNN2-205ENST00000562958 STK3Q13188 491 aa17.13■□□□□ 0.33
CNN2-205ENST00000562958 CCDC186Q7Z3E2 898 aa17.13■□□□□ 0.33
CNN2-205ENST00000562958 TCEANC2Q96MN5 208 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms