RNA–Protein interactions for RNA: ENST00000562882.5

CDH11-205, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-205ENST00000562882 DDX19BQ9UMR2 479 aa16.02■□□□□ 0.16
CDH11-205ENST00000562882 COG6Q9Y2V7 657 aa16.02■□□□□ 0.16
CDH11-205ENST00000562882 DDX60Q8IY21 1712 aaKnown RBP16.02■□□□□ 0.15
CDH11-205ENST00000562882 CHRNA5P30532 468 aa16.01■□□□□ 0.15
CDH11-205ENST00000562882 CTSWP56202 376 aa16.01■□□□□ 0.15
CDH11-205ENST00000562882 CCDC152Q4G0S7 254 aa16.01■□□□□ 0.15
CDH11-205ENST00000562882 RPGRQ92834 1020 aaKnown RBP16.01■□□□□ 0.15
CDH11-205ENST00000562882 ALDH1B1P30837 517 aa16■□□□□ 0.15
CDH11-205ENST00000562882 RBM17Q96I25 401 aaKnown RBP16■□□□□ 0.15
CDH11-205ENST00000562882 SUCLG2Q96I99 432 aa16■□□□□ 0.15
CDH11-205ENST00000562882 CRAMP1Q96RY5 1269 aa16■□□□□ 0.15
CDH11-205ENST00000562882 PIM2Q9P1W9 311 aa16■□□□□ 0.15
CDH11-205ENST00000562882 LAMB2P55268 1798 aa16■□□□□ 0.15
CDH11-205ENST00000562882 GNAI2P04899 355 aa15.99■□□□□ 0.15
CDH11-205ENST00000562882 RABL6Q3YEC7 729 aaPredicted RBP15.99■□□□□ 0.15
CDH11-205ENST00000562882 EPHA10Q5JZY3 1008 aa15.99■□□□□ 0.15
CDH11-205ENST00000562882 DDX46Q7L014 1031 aaKnown RBP15.99■□□□□ 0.15
CDH11-205ENST00000562882 CNKSR1Q969H4 720 aa15.99■□□□□ 0.15
CDH11-205ENST00000562882 ZNF622Q969S3 477 aaKnown RBP eCLIP15.99■□□□□ 0.15
CDH11-205ENST00000562882 RTL9Q8NET4 1388 aa15.99■□□□□ 0.15
CDH11-205ENST00000562882 TNRC6CQ9HCJ0 1690 aaKnown RBP15.99■□□□□ 0.15
CDH11-205ENST00000562882 LMBR1LQ6UX01 489 aa15.98■□□□□ 0.15
CDH11-205ENST00000562882 TTLL6Q8N841 843 aa15.98■□□□□ 0.15
CDH11-205ENST00000562882 BICC1Q9H694 974 aaKnown RBP15.98■□□□□ 0.15
CDH11-205ENST00000562882 ZBTB40Q9NUA8 1239 aa15.98■□□□□ 0.15
CDH11-205ENST00000562882 BBOX1O75936 387 aa15.97■□□□□ 0.15
CDH11-205ENST00000562882 ANKRD44Q8N8A2 993 aa15.97■□□□□ 0.15
CDH11-205ENST00000562882 GREM2Q9H772 168 aa15.97■□□□□ 0.15
CDH11-205ENST00000562882 LRRFIP2Q9Y608 721 aaKnown RBP15.97■□□□□ 0.15
CDH11-205ENST00000562882 DALRD3Q5D0E6 543 aaKnown RBP15.96■□□□□ 0.15
CDH11-205ENST00000562882 BRCA1P38398 1863 aaKnown RBP15.96■□□□□ 0.15
CDH11-205ENST00000562882 MYH3P11055 1940 aa15.96■□□□□ 0.14
CDH11-205ENST00000562882 DLEC1Q9Y238 1755 aa15.95■□□□□ 0.14
CDH11-205ENST00000562882 COL11A2P13942 1736 aaPredicted RBP15.95■□□□□ 0.14
CDH11-205ENST00000562882 ITGA6P23229 1130 aa15.95■□□□□ 0.14
CDH11-205ENST00000562882 RPS8P62241 208 aaKnown RBP15.95■□□□□ 0.14
CDH11-205ENST00000562882 IFIT5Q13325 482 aaKnown RBP15.95■□□□□ 0.14
CDH11-205ENST00000562882 GRAPQ13588 217 aa15.95■□□□□ 0.14
CDH11-205ENST00000562882 CCDC57Q2TAC2 916 aa15.95■□□□□ 0.14
CDH11-205ENST00000562882 GRAPLQ8TC17 118 aaPredicted RBP15.95■□□□□ 0.14
CDH11-205ENST00000562882 CCDC85AQ96PX6 553 aaPredicted RBP15.95■□□□□ 0.14
CDH11-205ENST00000562882 SEC31BQ9NQW1 1179 aa15.95■□□□□ 0.14
CDH11-205ENST00000562882 ANKRD18BA2A2Z9 1011 aa15.94■□□□□ 0.14
CDH11-205ENST00000562882 MTX1Q13505 466 aa15.94■□□□□ 0.14
CDH11-205ENST00000562882 AAMPQ13685 434 aa15.94■□□□□ 0.14
CDH11-205ENST00000562882 PRPF40BQ6NWY9 871 aaKnown RBP15.94■□□□□ 0.14
CDH11-205ENST00000562882 TMC4Q7Z404 712 aa15.94■□□□□ 0.14
CDH11-205ENST00000562882 CDC5LQ99459 802 aaKnown RBP15.94■□□□□ 0.14
CDH11-205ENST00000562882 CHMP3Q9Y3E7 222 aa15.94■□□□□ 0.14
CDH11-205ENST00000562882 FAM161AQ3B820 660 aa15.93■□□□□ 0.14
CDH11-205ENST00000562882 C7orf43Q8WVR3 580 aa15.93■□□□□ 0.14
CDH11-205ENST00000562882 CELF1Q92879 486 aaKnown RBP15.93■□□□□ 0.14
CDH11-205ENST00000562882 CRBNQ96SW2 442 aa15.93■□□□□ 0.14
CDH11-205ENST00000562882 ATP8B2P98198 1209 aa15.92■□□□□ 0.14
CDH11-205ENST00000562882 ANKRD18AQ8IVF6 992 aa15.92■□□□□ 0.14
CDH11-205ENST00000562882 SP8Q8IXZ3 490 aa15.92■□□□□ 0.14
CDH11-205ENST00000562882 BCS1LQ9Y276 419 aa15.92■□□□□ 0.14
CDH11-205ENST00000562882 PPEF1O14829 653 aaPredicted RBP15.91■□□□□ 0.14
CDH11-205ENST00000562882 SRGAP3O43295 1099 aa15.91■□□□□ 0.14
CDH11-205ENST00000562882 YBX3P16989 372 aaKnown RBP eCLIP15.91■□□□□ 0.14
CDH11-205ENST00000562882 CC2D2BQ6DHV5 1058 aa15.91■□□□□ 0.14
CDH11-205ENST00000562882 RPAP2Q8IXW5 612 aaPredicted RBP15.91■□□□□ 0.14
CDH11-205ENST00000562882 C1orf115Q9H7X2 142 aa15.91■□□□□ 0.14
CDH11-205ENST00000562882 BSDC1Q9NW68 430 aaPredicted RBP15.91■□□□□ 0.14
CDH11-205ENST00000562882 ATP6V0A2Q9Y487 856 aa15.91■□□□□ 0.14
CDH11-205ENST00000562882 IGHMBP2P38935 993 aaKnown RBP15.9■□□□□ 0.14
CDH11-205ENST00000562882 GRIPAP1Q4V328 841 aa15.9■□□□□ 0.14
CDH11-205ENST00000562882 SOGA3Q5TF21 947 aa15.9■□□□□ 0.14
CDH11-205ENST00000562882 MPHOSPH8Q99549 860 aa15.9■□□□□ 0.14
CDH11-205ENST00000562882 TMX4Q9H1E5 349 aaPredicted RBP15.9■□□□□ 0.14
CDH11-205ENST00000562882 SLX4Q8IY92 1834 aa15.89■□□□□ 0.13
CDH11-205ENST00000562882 TAF1P21675 1872 aa15.89■□□□□ 0.13
CDH11-205ENST00000562882 C21orf2O43822 256 aa15.89■□□□□ 0.13
CDH11-205ENST00000562882 RFX5P48382 616 aaPredicted RBP15.89■□□□□ 0.13
CDH11-205ENST00000562882 PTPN12Q05209 780 aaKnown RBP15.89■□□□□ 0.13
CDH11-205ENST00000562882 GPR162Q16538 588 aa15.89■□□□□ 0.13
CDH11-205ENST00000562882 TAF7LQ5H9L4 462 aa15.89■□□□□ 0.13
CDH11-205ENST00000562882 CEP85Q6P2H3 762 aa15.89■□□□□ 0.13
CDH11-205ENST00000562882 LDHAL6AQ6ZMR3 332 aa15.89■□□□□ 0.13
CDH11-205ENST00000562882 SSH3Q8TE77 659 aa15.89■□□□□ 0.13
CDH11-205ENST00000562882 WWC3Q9ULE0 1092 aa15.89■□□□□ 0.13
CDH11-205ENST00000562882 PNMA6EA0A0J9YXQ4 647 aa15.88■□□□□ 0.13
CDH11-205ENST00000562882 POLA2Q14181 598 aa15.88■□□□□ 0.13
CDH11-205ENST00000562882 RTKN2Q8IZC4 609 aa15.88■□□□□ 0.13
CDH11-205ENST00000562882 EXOC6Q8TAG9 804 aa15.88■□□□□ 0.13
CDH11-205ENST00000562882 ZNF594Q96JF6 807 aaPredicted RBP15.88■□□□□ 0.13
CDH11-205ENST00000562882 COPRSQ9NQ92 184 aa15.88■□□□□ 0.13
CDH11-205ENST00000562882 FBXO3Q9UK99 471 aa15.88■□□□□ 0.13
CDH11-205ENST00000562882 GRIN3BO60391 1043 aa15.87■□□□□ 0.13
CDH11-205ENST00000562882 MINPP1Q9UNW1 487 aa15.87■□□□□ 0.13
CDH11-205ENST00000562882 COL4A1P02462 1669 aa15.86■□□□□ 0.13
CDH11-205ENST00000562882 DCAF8L1A6NGE4 600 aa15.86■□□□□ 0.13
CDH11-205ENST00000562882 CCDC93Q567U6 631 aa15.86■□□□□ 0.13
CDH11-205ENST00000562882 SIRT2Q8IXJ6 389 aa15.86■□□□□ 0.13
CDH11-205ENST00000562882 PELP1Q8IZL8 1130 aaKnown RBP15.86■□□□□ 0.13
CDH11-205ENST00000562882 KLHDC4Q8TBB5 520 aa15.86■□□□□ 0.13
CDH11-205ENST00000562882 CNNM1Q9NRU3 951 aa15.86■□□□□ 0.13
CDH11-205ENST00000562882 ZNF219Q9P2Y4 722 aaPredicted RBP15.86■□□□□ 0.13
CDH11-205ENST00000562882 RIPOR2Q9Y4F9 1068 aa15.86■□□□□ 0.13
CDH11-205ENST00000562882 ARFGEF1Q9Y6D6 1849 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms