RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 NMRK2Q9NPI5 230 aa12□□□□□ -0.49
CHRFAM7A-204ENST00000562729 TRMT112Q9UI30 125 aaKnown RBP12□□□□□ -0.49
CHRFAM7A-204ENST00000562729 SALL2Q9Y467 1007 aaPredicted RBP12□□□□□ -0.49
CHRFAM7A-204ENST00000562729 ZC3H4Q9UPT8 1303 aaKnown RBP12□□□□□ -0.49
CHRFAM7A-204ENST00000562729 IBTKQ9P2D0 1353 aaPredicted RBP12□□□□□ -0.49
CHRFAM7A-204ENST00000562729 TIAM2Q8IVF5 1701 aa12□□□□□ -0.49
CHRFAM7A-204ENST00000562729 SLX4Q8IY92 1834 aa12□□□□□ -0.49
CHRFAM7A-204ENST00000562729 NFKBIEO00221 500 aa11.99□□□□□ -0.49
CHRFAM7A-204ENST00000562729 TOMM70O94826 608 aa11.99□□□□□ -0.49
CHRFAM7A-204ENST00000562729 ANKRD13DQ6ZTN6 518 aa11.99□□□□□ -0.49
CHRFAM7A-204ENST00000562729 RIC3Q7Z5B4 369 aa11.99□□□□□ -0.49
CHRFAM7A-204ENST00000562729 RTKN2Q8IZC4 609 aa11.99□□□□□ -0.49
CHRFAM7A-204ENST00000562729 FAM9BQ8IZU0 186 aa11.99□□□□□ -0.49
CHRFAM7A-204ENST00000562729 PLBD2Q8NHP8 589 aa11.99□□□□□ -0.49
CHRFAM7A-204ENST00000562729 RRAGCQ9HB90 399 aa11.99□□□□□ -0.49
CHRFAM7A-204ENST00000562729 ABCC12Q96J65 1359 aa11.99□□□□□ -0.49
CHRFAM7A-204ENST00000562729 ARFGEF2Q9Y6D5 1785 aa11.99□□□□□ -0.49
CHRFAM7A-204ENST00000562729 CCDC88AQ3V6T2 1871 aa11.99□□□□□ -0.49
CHRFAM7A-204ENST00000562729 ANKRD36CQ5JPF3 1778 aa11.98□□□□□ -0.49
CHRFAM7A-204ENST00000562729 RNF123Q5XPI4 1314 aa11.98□□□□□ -0.49
CHRFAM7A-204ENST00000562729 TCERG1O14776 1098 aaKnown RBP11.98□□□□□ -0.49
CHRFAM7A-204ENST00000562729 KIF3CO14782 793 aa11.98□□□□□ -0.49
CHRFAM7A-204ENST00000562729 NTSR2O95665 410 aa11.98□□□□□ -0.49
CHRFAM7A-204ENST00000562729 DDX58O95786 925 aaKnown RBP11.98□□□□□ -0.49
CHRFAM7A-204ENST00000562729 TCIRG1Q13488 830 aa11.98□□□□□ -0.49
CHRFAM7A-204ENST00000562729 CCDC30Q5VVM6 783 aa11.98□□□□□ -0.49
CHRFAM7A-204ENST00000562729 STK31Q9BXU1 1019 aa11.98□□□□□ -0.49
CHRFAM7A-204ENST00000562729 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.98□□□□□ -0.49
CHRFAM7A-204ENST00000562729 TNRC6CQ9HCJ0 1690 aaKnown RBP11.97□□□□□ -0.49
CHRFAM7A-204ENST00000562729 LTBP3Q9NS15 1303 aa11.97□□□□□ -0.49
CHRFAM7A-204ENST00000562729 KLRG2A4D1S0 409 aaPredicted RBP11.97□□□□□ -0.49
CHRFAM7A-204ENST00000562729 GLTPD2A6NH11 291 aa11.97□□□□□ -0.49
CHRFAM7A-204ENST00000562729 ZNF853P0CG23 659 aa11.97□□□□□ -0.49
CHRFAM7A-204ENST00000562729 LRP10Q7Z4F1 713 aa11.97□□□□□ -0.49
CHRFAM7A-204ENST00000562729 NLRP10Q86W26 655 aa11.97□□□□□ -0.49
CHRFAM7A-204ENST00000562729 TSR2Q969E8 191 aaKnown RBP11.97□□□□□ -0.49
CHRFAM7A-204ENST00000562729 ZNF428Q96B54 188 aa11.97□□□□□ -0.49
CHRFAM7A-204ENST00000562729 FER1L6Q2WGJ9 1857 aa11.97□□□□□ -0.49
CHRFAM7A-204ENST00000562729 SH3TC1Q8TE82 1336 aa11.96□□□□□ -0.49
CHRFAM7A-204ENST00000562729 PPEF1O14829 653 aaPredicted RBP11.96□□□□□ -0.49
CHRFAM7A-204ENST00000562729 FKBP4Q02790 459 aaKnown RBP eCLIP11.96□□□□□ -0.49
CHRFAM7A-204ENST00000562729 CCDC27Q2M243 656 aa11.96□□□□□ -0.49
CHRFAM7A-204ENST00000562729 CRY2Q49AN0 593 aa11.96□□□□□ -0.49
CHRFAM7A-204ENST00000562729 CC2D2BQ6DHV5 1058 aa11.96□□□□□ -0.49
CHRFAM7A-204ENST00000562729 WWC1Q8IX03 1113 aa11.96□□□□□ -0.49
CHRFAM7A-204ENST00000562729 C8orf58Q8NAV2 365 aa11.96□□□□□ -0.49
CHRFAM7A-204ENST00000562729 TMEM121BQ9BXQ6 578 aaPredicted RBP11.96□□□□□ -0.49
CHRFAM7A-204ENST00000562729 RIC1Q4ADV7 1423 aa11.95□□□□□ -0.5
CHRFAM7A-204ENST00000562729 ATP5J2-PTCD1G3V325 749 aa11.95□□□□□ -0.5
CHRFAM7A-204ENST00000562729 HCLS1P14317 486 aaPredicted RBP11.95□□□□□ -0.5
CHRFAM7A-204ENST00000562729 VEGFAP15692 232 aaPredicted RBP11.95□□□□□ -0.5
CHRFAM7A-204ENST00000562729 HSPA6P17066 643 aa11.95□□□□□ -0.5
CHRFAM7A-204ENST00000562729 GRIPAP1Q4V328 841 aa11.95□□□□□ -0.5
CHRFAM7A-204ENST00000562729 DDX46Q7L014 1031 aaKnown RBP11.95□□□□□ -0.5
CHRFAM7A-204ENST00000562729 PDCD7Q8N8D1 485 aaKnown RBP11.95□□□□□ -0.5
CHRFAM7A-204ENST00000562729 JDP2Q8WYK2 163 aa11.95□□□□□ -0.5
CHRFAM7A-204ENST00000562729 CRAMP1Q96RY5 1269 aa11.95□□□□□ -0.5
CHRFAM7A-204ENST00000562729 ZNF277Q9NRM2 450 aaPredicted RBP11.95□□□□□ -0.5
CHRFAM7A-204ENST00000562729 SNPHO15079 494 aa11.94□□□□□ -0.5
CHRFAM7A-204ENST00000562729 HSP90B1P14625 803 aaKnown RBP11.94□□□□□ -0.5
CHRFAM7A-204ENST00000562729 HOXA10P31260 410 aaPredicted RBP11.94□□□□□ -0.5
CHRFAM7A-204ENST00000562729 PRELPP51888 382 aa11.94□□□□□ -0.5
CHRFAM7A-204ENST00000562729 GSE1Q14687 1217 aa11.94□□□□□ -0.5
CHRFAM7A-204ENST00000562729 TWISTNBQ3B726 338 aaPredicted RBP11.94□□□□□ -0.5
CHRFAM7A-204ENST00000562729 RTL5Q5HYW3 569 aaPredicted RBP11.94□□□□□ -0.5
CHRFAM7A-204ENST00000562729 OLFM4Q6UX06 510 aa11.94□□□□□ -0.5
CHRFAM7A-204ENST00000562729 SYNE4Q8N205 404 aa11.94□□□□□ -0.5
CHRFAM7A-204ENST00000562729 RBM46Q8TBY0 533 aaKnown RBP11.94□□□□□ -0.5
CHRFAM7A-204ENST00000562729 IL16Q14005 1332 aa11.93□□□□□ -0.5
CHRFAM7A-204ENST00000562729 IARSP41252 1262 aaKnown RBP11.93□□□□□ -0.5
CHRFAM7A-204ENST00000562729 NEXNQ0ZGT2 675 aa11.93□□□□□ -0.5
CHRFAM7A-204ENST00000562729 SLC10A5Q5PT55 438 aa11.93□□□□□ -0.5
CHRFAM7A-204ENST00000562729 ZNF467Q7Z7K2 595 aaPredicted RBP11.93□□□□□ -0.5
CHRFAM7A-204ENST00000562729 SMC1BQ8NDV3 1235 aa11.93□□□□□ -0.5
CHRFAM7A-204ENST00000562729 C7orf43Q8WVR3 580 aa11.93□□□□□ -0.5
CHRFAM7A-204ENST00000562729 FAM89AQ96GI7 184 aa11.93□□□□□ -0.5
CHRFAM7A-204ENST00000562729 MYD88Q99836 296 aa11.93□□□□□ -0.5
CHRFAM7A-204ENST00000562729 PHAXQ9H814 394 aaKnown RBP11.93□□□□□ -0.5
CHRFAM7A-204ENST00000562729 DICER1Q9UPY3 1922 aaKnown RBP11.93□□□□□ -0.5
CHRFAM7A-204ENST00000562729 APLP1P51693 650 aa11.92□□□□□ -0.5
CHRFAM7A-204ENST00000562729 FSTL1Q12841 308 aa11.92□□□□□ -0.5
CHRFAM7A-204ENST00000562729 C3orf67Q6ZVT6 689 aa11.92□□□□□ -0.5
CHRFAM7A-204ENST00000562729 LARGE2Q8N3Y3 721 aa11.92□□□□□ -0.5
CHRFAM7A-204ENST00000562729 PSMD1Q99460 953 aa11.92□□□□□ -0.5
CHRFAM7A-204ENST00000562729 MYH16Q9H6N6 1097 aa11.92□□□□□ -0.5
CHRFAM7A-204ENST00000562729 ABCC4O15439 1325 aa11.91□□□□□ -0.5
CHRFAM7A-204ENST00000562729 IQCA1LA6NCM1 817 aa11.91□□□□□ -0.5
CHRFAM7A-204ENST00000562729 BBOX1O75936 387 aa11.91□□□□□ -0.5
CHRFAM7A-204ENST00000562729 DDNO94850 711 aaPredicted RBP11.91□□□□□ -0.5
CHRFAM7A-204ENST00000562729 EIF6P56537 245 aaKnown RBP11.91□□□□□ -0.5
CHRFAM7A-204ENST00000562729 DPP8Q6V1X1 898 aaPredicted RBP11.91□□□□□ -0.5
CHRFAM7A-204ENST00000562729 WDR63Q8IWG1 891 aa11.91□□□□□ -0.5
CHRFAM7A-204ENST00000562729 TSPYL6Q8N831 410 aa11.91□□□□□ -0.5
CHRFAM7A-204ENST00000562729 SUPT20HQ8NEM7 779 aa11.91□□□□□ -0.5
CHRFAM7A-204ENST00000562729 ISCA1Q9BUE6 129 aa11.91□□□□□ -0.5
CHRFAM7A-204ENST00000562729 CWC25Q9NXE8 425 aaPredicted RBP11.91□□□□□ -0.5
CHRFAM7A-204ENST00000562729 MAP3K2Q9Y2U5 619 aa11.91□□□□□ -0.5
CHRFAM7A-204ENST00000562729 FANCIQ9NVI1 1328 aa11.9□□□□□ -0.5
CHRFAM7A-204ENST00000562729 IRS4O14654 1257 aaPredicted RBP11.9□□□□□ -0.5
CHRFAM7A-204ENST00000562729 CHRM1P11229 460 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms