RNA–Protein interactions for RNA: ENST00000562474.1

TSC2-218, Transcript of TSC complex subunit 2, humanhuman

TSL 5

Gene TSC2, Length 589 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-218ENST00000562474 CDHR2Q9BYE9 1310 aa14.21□□□□□ -0.13
TSC2-218ENST00000562474 PDE8AO60658 829 aa14.21□□□□□ -0.13
TSC2-218ENST00000562474 YY1P25490 414 aa14.21□□□□□ -0.13
TSC2-218ENST00000562474 HOXA10P31260 410 aaPredicted RBP14.21□□□□□ -0.13
TSC2-218ENST00000562474 DDX46Q7L014 1031 aaKnown RBP14.21□□□□□ -0.13
TSC2-218ENST00000562474 C9orf78Q9NZ63 289 aaPredicted RBP14.21□□□□□ -0.13
TSC2-218ENST00000562474 PDZRN3Q9UPQ7 1066 aa14.21□□□□□ -0.13
TSC2-218ENST00000562474 KIF16BQ96L93 1317 aa14.2□□□□□ -0.14
TSC2-218ENST00000562474 GRM8O00222 908 aa14.2□□□□□ -0.14
TSC2-218ENST00000562474 NBPF7P0C2Y1 421 aaPredicted RBP14.2□□□□□ -0.14
TSC2-218ENST00000562474 CTSWP56202 376 aa14.2□□□□□ -0.14
TSC2-218ENST00000562474 SF3B3Q15393 1217 aaKnown RBP14.2□□□□□ -0.14
TSC2-218ENST00000562474 FAM161AQ3B820 660 aa14.2□□□□□ -0.14
TSC2-218ENST00000562474 C7orf43Q8WVR3 580 aa14.2□□□□□ -0.14
TSC2-218ENST00000562474 SUCLG2Q96I99 432 aa14.2□□□□□ -0.14
TSC2-218ENST00000562474 GREM2Q9H772 168 aa14.2□□□□□ -0.14
TSC2-218ENST00000562474 CHMP3Q9Y3E7 222 aa14.2□□□□□ -0.14
TSC2-218ENST00000562474 UTRNP46939 3433 aa14.19□□□□□ -0.14
TSC2-218ENST00000562474 LTBP1Q14766 1721 aa14.19□□□□□ -0.14
TSC2-218ENST00000562474 ALDH1L1O75891 902 aa14.19□□□□□ -0.14
TSC2-218ENST00000562474 TRIM27P14373 513 aa14.19□□□□□ -0.14
TSC2-218ENST00000562474 ALDH1B1P30837 517 aa14.19□□□□□ -0.14
TSC2-218ENST00000562474 GRAPQ13588 217 aa14.19□□□□□ -0.14
TSC2-218ENST00000562474 C9orf131Q5VYM1 1079 aa14.19□□□□□ -0.14
TSC2-218ENST00000562474 GRAPLQ8TC17 118 aaPredicted RBP14.19□□□□□ -0.14
TSC2-218ENST00000562474 ZNF526Q8TF50 670 aaPredicted RBP14.19□□□□□ -0.14
TSC2-218ENST00000562474 CRAMP1Q96RY5 1269 aa14.19□□□□□ -0.14
TSC2-218ENST00000562474 API5Q9BZZ5 524 aaKnown RBP14.19□□□□□ -0.14
TSC2-218ENST00000562474 RNF181Q9P0P0 153 aa14.19□□□□□ -0.14
TSC2-218ENST00000562474 DUOX1Q9NRD9 1551 aa14.18□□□□□ -0.14
TSC2-218ENST00000562474 SNED1Q8TER0 1413 aa14.18□□□□□ -0.14
TSC2-218ENST00000562474 COL4A5P29400 1685 aa14.18□□□□□ -0.14
TSC2-218ENST00000562474 PLIN1O60240 522 aa14.18□□□□□ -0.14
TSC2-218ENST00000562474 CCDC93Q567U6 631 aa14.18□□□□□ -0.14
TSC2-218ENST00000562474 TTLL11Q8NHH1 800 aa14.18□□□□□ -0.14
TSC2-218ENST00000562474 GPR101Q96P66 508 aaPredicted RBP14.18□□□□□ -0.14
TSC2-218ENST00000562474 RLBP1P12271 317 aa14.17□□□□□ -0.14
TSC2-218ENST00000562474 BRPF1P55201 1214 aaPredicted RBP14.17□□□□□ -0.14
TSC2-218ENST00000562474 FOXO4P98177 505 aa14.17□□□□□ -0.14
TSC2-218ENST00000562474 CCDC152Q4G0S7 254 aa14.17□□□□□ -0.14
TSC2-218ENST00000562474 ZKSCAN2Q63HK3 967 aa14.17□□□□□ -0.14
TSC2-218ENST00000562474 KAZALD1Q96I82 304 aa14.17□□□□□ -0.14
TSC2-218ENST00000562474 ZNF277Q9NRM2 450 aaPredicted RBP14.17□□□□□ -0.14
TSC2-218ENST00000562474 LMBR1LQ6UX01 489 aa14.16□□□□□ -0.14
TSC2-218ENST00000562474 ATF7IPQ6VMQ6 1270 aa14.16□□□□□ -0.14
TSC2-218ENST00000562474 TMEM57Q8N5G2 664 aa14.16□□□□□ -0.14
TSC2-218ENST00000562474 ZNF594Q96JF6 807 aaPredicted RBP14.16□□□□□ -0.14
TSC2-218ENST00000562474 MEIS3Q99687 375 aa14.16□□□□□ -0.14
TSC2-218ENST00000562474 USP44Q9H0E7 712 aa14.16□□□□□ -0.14
TSC2-218ENST00000562474 TAOK3Q9H2K8 898 aa14.16□□□□□ -0.14
TSC2-218ENST00000562474 RCAN3Q9UKA8 241 aa14.16□□□□□ -0.14
TSC2-218ENST00000562474 PANK1Q8TE04 598 aa14.15□□□□□ -0.14
TSC2-218ENST00000562474 PLA2G12BQ9BX93 195 aa14.15□□□□□ -0.14
TSC2-218ENST00000562474 BICC1Q9H694 974 aaKnown RBP14.15□□□□□ -0.14
TSC2-218ENST00000562474 ATP6V0A2Q9Y487 856 aa14.15□□□□□ -0.14
TSC2-218ENST00000562474 SCN9AQ15858 1988 aa14.14□□□□□ -0.15
TSC2-218ENST00000562474 ITGA6P23229 1130 aa14.14□□□□□ -0.15
TSC2-218ENST00000562474 CCT4P50991 539 aaKnown RBP14.14□□□□□ -0.15
TSC2-218ENST00000562474 RPS8P62241 208 aaKnown RBP14.14□□□□□ -0.15
TSC2-218ENST00000562474 GPSM2P81274 684 aa14.14□□□□□ -0.15
TSC2-218ENST00000562474 WTIPA6NIX2 430 aaPredicted RBP14.13□□□□□ -0.15
TSC2-218ENST00000562474 IPO8O15397 1037 aaKnown RBP14.13□□□□□ -0.15
TSC2-218ENST00000562474 BBOX1O75936 387 aa14.13□□□□□ -0.15
TSC2-218ENST00000562474 FKBP4Q02790 459 aaKnown RBP eCLIP14.13□□□□□ -0.15
TSC2-218ENST00000562474 ANKRD18AQ8IVF6 992 aa14.13□□□□□ -0.15
TSC2-218ENST00000562474 ANKRD44Q8N8A2 993 aa14.13□□□□□ -0.15
TSC2-218ENST00000562474 LRRFIP2Q9Y608 721 aaKnown RBP14.13□□□□□ -0.15
TSC2-218ENST00000562474 UTYO14607 1347 aa14.13□□□□□ -0.15
TSC2-218ENST00000562474 CSF1RP07333 972 aa14.12□□□□□ -0.15
TSC2-218ENST00000562474 HSP90B1P14625 803 aaKnown RBP14.12□□□□□ -0.15
TSC2-218ENST00000562474 LMNB1P20700 586 aa14.12□□□□□ -0.15
TSC2-218ENST00000562474 DPP8Q6V1X1 898 aaPredicted RBP14.12□□□□□ -0.15
TSC2-218ENST00000562474 SP8Q8IXZ3 490 aa14.12□□□□□ -0.15
TSC2-218ENST00000562474 FTSJ3Q8IY81 847 aaKnown RBP14.12□□□□□ -0.15
TSC2-218ENST00000562474 MPNDQ8N594 471 aa14.12□□□□□ -0.15
TSC2-218ENST00000562474 KLHDC4Q8TBB5 520 aa14.12□□□□□ -0.15
TSC2-218ENST00000562474 ARHGAP45Q92619 1136 aa14.12□□□□□ -0.15
TSC2-218ENST00000562474 C1orf115Q9H7X2 142 aa14.12□□□□□ -0.15
TSC2-218ENST00000562474 NSFL1CQ9UNZ2 370 aaKnown RBP14.12□□□□□ -0.15
TSC2-218ENST00000562474 ANKRD18BA2A2Z9 1011 aa14.11□□□□□ -0.15
TSC2-218ENST00000562474 RIMBP2O15034 1052 aa14.11□□□□□ -0.15
TSC2-218ENST00000562474 UBTFL1P0CB47 393 aaPredicted RBP14.11□□□□□ -0.15
TSC2-218ENST00000562474 IARSP41252 1262 aaKnown RBP14.11□□□□□ -0.15
TSC2-218ENST00000562474 AOC3Q16853 763 aa14.11□□□□□ -0.15
TSC2-218ENST00000562474 C20orf194Q5TEA3 1177 aa14.11□□□□□ -0.15
TSC2-218ENST00000562474 SOGA3Q5TF21 947 aa14.11□□□□□ -0.15
TSC2-218ENST00000562474 INTS3Q68E01 1043 aaKnown RBP14.11□□□□□ -0.15
TSC2-218ENST00000562474 ITPRIPQ8IWB1 547 aa14.11□□□□□ -0.15
TSC2-218ENST00000562474 DZIP1LQ8IYY4 767 aaKnown RBP14.11□□□□□ -0.15
TSC2-218ENST00000562474 RTKN2Q8IZC4 609 aa14.11□□□□□ -0.15
TSC2-218ENST00000562474 HELBQ8NG08 1087 aaPredicted RBP14.11□□□□□ -0.15
TSC2-218ENST00000562474 CDC5LQ99459 802 aaKnown RBP14.11□□□□□ -0.15
TSC2-218ENST00000562474 LTBP3Q9NS15 1303 aa14.11□□□□□ -0.15
TSC2-218ENST00000562474 RTL9Q8NET4 1388 aa14.1□□□□□ -0.15
TSC2-218ENST00000562474 MYH13Q9UKX3 1938 aa14.1□□□□□ -0.15
TSC2-218ENST00000562474 C6orf229H3BNL8 230 aa14.1□□□□□ -0.15
TSC2-218ENST00000562474 SNAP23O00161 211 aa14.1□□□□□ -0.15
TSC2-218ENST00000562474 PPIP5K2O43314 1243 aa14.1□□□□□ -0.15
TSC2-218ENST00000562474 IFIT5Q13325 482 aaKnown RBP14.1□□□□□ -0.15
TSC2-218ENST00000562474 ZNF784Q8NCA9 323 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms