RNA–Protein interactions for RNA: ENST00000561954.1

IFT140-205, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-205ENST00000561954 CASP7P55210 303 aa17.63■□□□□ 0.41
IFT140-205ENST00000561954 INTS3Q68E01 1043 aaKnown RBP17.63■□□□□ 0.41
IFT140-205ENST00000561954 WWC3Q9ULE0 1092 aa17.63■□□□□ 0.41
IFT140-205ENST00000561954 TMC4Q7Z404 712 aa17.62■□□□□ 0.41
IFT140-205ENST00000561954 DZIP1LQ8IYY4 767 aaKnown RBP17.62■□□□□ 0.41
IFT140-205ENST00000561954 MYH3P11055 1940 aa17.61■□□□□ 0.41
IFT140-205ENST00000561954 PPEF1O14829 653 aaPredicted RBP17.61■□□□□ 0.41
IFT140-205ENST00000561954 GRAPQ13588 217 aa17.61■□□□□ 0.41
IFT140-205ENST00000561954 GRAPLQ8TC17 118 aaPredicted RBP17.61■□□□□ 0.41
IFT140-205ENST00000561954 TMX4Q9H1E5 349 aaPredicted RBP17.61■□□□□ 0.41
IFT140-205ENST00000561954 UBTFL1P0CB47 393 aaPredicted RBP17.6■□□□□ 0.41
IFT140-205ENST00000561954 GRIPAP1Q4V328 841 aa17.6■□□□□ 0.41
IFT140-205ENST00000561954 CC2D2BQ6DHV5 1058 aa17.6■□□□□ 0.41
IFT140-205ENST00000561954 JARID2Q92833 1246 aaPredicted RBP17.6■□□□□ 0.41
IFT140-205ENST00000561954 CLUAP1Q96AJ1 413 aa17.6■□□□□ 0.41
IFT140-205ENST00000561954 CDC5LQ99459 802 aaKnown RBP17.6■□□□□ 0.41
IFT140-205ENST00000561954 CACNA1SQ13698 1873 aa17.59■□□□□ 0.41
IFT140-205ENST00000561954 BBOX1O75936 387 aa17.59■□□□□ 0.41
IFT140-205ENST00000561954 GNAI3P08754 354 aa17.59■□□□□ 0.41
IFT140-205ENST00000561954 NBPF7P0C2Y1 421 aaPredicted RBP17.59■□□□□ 0.41
IFT140-205ENST00000561954 CCDC93Q567U6 631 aa17.59■□□□□ 0.41
IFT140-205ENST00000561954 UTRNP46939 3433 aa17.59■□□□□ 0.41
IFT140-205ENST00000561954 TMEM57Q8N5G2 664 aa17.58■□□□□ 0.4
IFT140-205ENST00000561954 TTLL11Q8NHH1 800 aa17.58■□□□□ 0.4
IFT140-205ENST00000561954 USP44Q9H0E7 712 aa17.58■□□□□ 0.4
IFT140-205ENST00000561954 C21orf2O43822 256 aa17.57■□□□□ 0.4
IFT140-205ENST00000561954 ITPRIPQ8IWB1 547 aa17.57■□□□□ 0.4
IFT140-205ENST00000561954 LRRC37AA6NMS7 1700 aa17.57■□□□□ 0.4
IFT140-205ENST00000561954 SLX4Q8IY92 1834 aa17.56■□□□□ 0.4
IFT140-205ENST00000561954 CSF1RP07333 972 aa17.56■□□□□ 0.4
IFT140-205ENST00000561954 FAM161AQ3B820 660 aa17.56■□□□□ 0.4
IFT140-205ENST00000561954 ANKRD18AQ8IVF6 992 aa17.56■□□□□ 0.4
IFT140-205ENST00000561954 RTKN2Q8IZC4 609 aa17.56■□□□□ 0.4
IFT140-205ENST00000561954 SUCLG2Q96I99 432 aa17.56■□□□□ 0.4
IFT140-205ENST00000561954 GREM2Q9H772 168 aa17.56■□□□□ 0.4
IFT140-205ENST00000561954 CHMP3Q9Y3E7 222 aa17.56■□□□□ 0.4
IFT140-205ENST00000561954 LTBP3Q9NS15 1303 aa17.55■□□□□ 0.4
IFT140-205ENST00000561954 ITGA6P23229 1130 aa17.55■□□□□ 0.4
IFT140-205ENST00000561954 FOXO4P98177 505 aa17.55■□□□□ 0.4
IFT140-205ENST00000561954 IFIT5Q13325 482 aaKnown RBP17.55■□□□□ 0.4
IFT140-205ENST00000561954 PDE3AQ14432 1141 aa17.55■□□□□ 0.4
IFT140-205ENST00000561954 RABL6Q3YEC7 729 aaPredicted RBP17.55■□□□□ 0.4
IFT140-205ENST00000561954 LMBR1LQ6UX01 489 aa17.55■□□□□ 0.4
IFT140-205ENST00000561954 C7orf43Q8WVR3 580 aa17.55■□□□□ 0.4
IFT140-205ENST00000561954 CCDC85AQ96PX6 553 aaPredicted RBP17.55■□□□□ 0.4
IFT140-205ENST00000561954 MEIS3Q99687 375 aa17.55■□□□□ 0.4
IFT140-205ENST00000561954 CHMP4BQ9H444 224 aaKnown RBP17.55■□□□□ 0.4
IFT140-205ENST00000561954 BICC1Q9H694 974 aaKnown RBP17.55■□□□□ 0.4
IFT140-205ENST00000561954 TNNQ9UQP3 1299 aa17.55■□□□□ 0.4
IFT140-205ENST00000561954 ATP6V0A2Q9Y487 856 aa17.55■□□□□ 0.4
IFT140-205ENST00000561954 ANKRD18BA2A2Z9 1011 aa17.54■□□□□ 0.4
IFT140-205ENST00000561954 IGHMBP2P38935 993 aaKnown RBP17.54■□□□□ 0.4
IFT140-205ENST00000561954 RPS8P62241 208 aaKnown RBP17.54■□□□□ 0.4
IFT140-205ENST00000561954 CCDC57Q2TAC2 916 aa17.54■□□□□ 0.4
IFT140-205ENST00000561954 ARHGAP27Q6ZUM4 889 aa17.54■□□□□ 0.4
IFT140-205ENST00000561954 CELF1Q92879 486 aaKnown RBP17.54■□□□□ 0.4
IFT140-205ENST00000561954 TAOK3Q9H2K8 898 aa17.54■□□□□ 0.4
IFT140-205ENST00000561954 ZNF219Q9P2Y4 722 aaPredicted RBP17.54■□□□□ 0.4
IFT140-205ENST00000561954 RLBP1P12271 317 aa17.53■□□□□ 0.4
IFT140-205ENST00000561954 RRP1P56182 461 aaKnown RBP17.53■□□□□ 0.4
IFT140-205ENST00000561954 TAF7LQ5H9L4 462 aa17.53■□□□□ 0.4
IFT140-205ENST00000561954 SP8Q8IXZ3 490 aa17.53■□□□□ 0.4
IFT140-205ENST00000561954 SEC31BQ9NQW1 1179 aa17.53■□□□□ 0.4
IFT140-205ENST00000561954 SNED1Q8TER0 1413 aa17.53■□□□□ 0.4
IFT140-205ENST00000561954 GNAI2P04899 355 aa17.52■□□□□ 0.4
IFT140-205ENST00000561954 MVPQ14764 893 aaKnown RBP17.52■□□□□ 0.4
IFT140-205ENST00000561954 EPHA10Q5JZY3 1008 aa17.52■□□□□ 0.4
IFT140-205ENST00000561954 PANK1Q8TE04 598 aa17.52■□□□□ 0.4
IFT140-205ENST00000561954 KAZALD1Q96I82 304 aa17.52■□□□□ 0.4
IFT140-205ENST00000561954 PSMD1Q99460 953 aa17.52■□□□□ 0.4
IFT140-205ENST00000561954 DDX19BQ9UMR2 479 aa17.52■□□□□ 0.4
IFT140-205ENST00000561954 NFKBIEO00221 500 aa17.51■□□□□ 0.39
IFT140-205ENST00000561954 PLIN1O60240 522 aa17.51■□□□□ 0.39
IFT140-205ENST00000561954 FKBP4Q02790 459 aaKnown RBP eCLIP17.51■□□□□ 0.39
IFT140-205ENST00000561954 FER1L6Q2WGJ9 1857 aa17.51■□□□□ 0.39
IFT140-205ENST00000561954 ANKRD44Q8N8A2 993 aa17.51■□□□□ 0.39
IFT140-205ENST00000561954 MPHOSPH8Q99549 860 aa17.51■□□□□ 0.39
IFT140-205ENST00000561954 LRRFIP2Q9Y608 721 aaKnown RBP17.51■□□□□ 0.39
IFT140-205ENST00000561954 LMNB1P20700 586 aa17.5■□□□□ 0.39
IFT140-205ENST00000561954 DPP8Q6V1X1 898 aaPredicted RBP17.5■□□□□ 0.39
IFT140-205ENST00000561954 SUPT20HQ8NEM7 779 aa17.5■□□□□ 0.39
IFT140-205ENST00000561954 BSDC1Q9NW68 430 aaPredicted RBP17.5■□□□□ 0.39
IFT140-205ENST00000561954 COL4A1P02462 1669 aa17.5■□□□□ 0.39
IFT140-205ENST00000561954 RASSF7Q02833 373 aa17.49■□□□□ 0.39
IFT140-205ENST00000561954 ZC3H4Q9UPT8 1303 aaKnown RBP17.48■□□□□ 0.39
IFT140-205ENST00000561954 LTBP1Q14766 1721 aa17.48■□□□□ 0.39
IFT140-205ENST00000561954 MPNDQ8N594 471 aa17.48■□□□□ 0.39
IFT140-205ENST00000561954 XDHP47989 1333 aa17.47■□□□□ 0.39
IFT140-205ENST00000561954 SPEF2Q9C093 1822 aa17.47■□□□□ 0.39
IFT140-205ENST00000561954 MTX1Q13505 466 aa17.47■□□□□ 0.39
IFT140-205ENST00000561954 OLFM4Q6UX06 510 aa17.47■□□□□ 0.39
IFT140-205ENST00000561954 RTFDC1Q9BY42 306 aaPredicted RBP17.47■□□□□ 0.39
IFT140-205ENST00000561954 VPS33BQ9H267 617 aa17.47■□□□□ 0.39
IFT140-205ENST00000561954 PODXL2Q9NZ53 605 aa17.47■□□□□ 0.39
IFT140-205ENST00000561954 ANKIB1Q9P2G1 1089 aa17.47■□□□□ 0.39
IFT140-205ENST00000561954 COG6Q9Y2V7 657 aa17.47■□□□□ 0.39
IFT140-205ENST00000561954 DUOX1Q9NRD9 1551 aa17.47■□□□□ 0.39
IFT140-205ENST00000561954 ZBTB7BO15156 539 aaPredicted RBP17.46■□□□□ 0.39
IFT140-205ENST00000561954 ANKRD2Q9GZV1 360 aa17.46■□□□□ 0.39
IFT140-205ENST00000561954 RNF181Q9P0P0 153 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms