RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 JDP2Q8WYK2 163 aa10.69□□□□□ -0.7
GINS3-204ENST00000561952 IFT57Q9NWB7 429 aa10.69□□□□□ -0.7
GINS3-204ENST00000561952 DBF4Q9UBU7 674 aaPredicted RBP10.69□□□□□ -0.7
GINS3-204ENST00000561952 SALL2Q9Y467 1007 aaPredicted RBP10.69□□□□□ -0.7
GINS3-204ENST00000561952 SH3TC1Q8TE82 1336 aa10.68□□□□□ -0.7
GINS3-204ENST00000561952 HOXB7P09629 217 aa10.68□□□□□ -0.7
GINS3-204ENST00000561952 CALD1Q05682 793 aaKnown RBP10.68□□□□□ -0.7
GINS3-204ENST00000561952 LARGE2Q8N3Y3 721 aa10.68□□□□□ -0.7
GINS3-204ENST00000561952 DNAJC5GQ8N7S2 189 aa10.68□□□□□ -0.7
GINS3-204ENST00000561952 C8orf58Q8NAV2 365 aa10.68□□□□□ -0.7
GINS3-204ENST00000561952 PLBD2Q8NHP8 589 aa10.68□□□□□ -0.7
GINS3-204ENST00000561952 TSR2Q969E8 191 aaKnown RBP10.68□□□□□ -0.7
GINS3-204ENST00000561952 KLRG1Q96E93 195 aa10.68□□□□□ -0.7
GINS3-204ENST00000561952 CRAMP1Q96RY5 1269 aa10.68□□□□□ -0.7
GINS3-204ENST00000561952 PSMD1Q99460 953 aa10.68□□□□□ -0.7
GINS3-204ENST00000561952 TMX4Q9H1E5 349 aaPredicted RBP10.68□□□□□ -0.7
GINS3-204ENST00000561952 PHAXQ9H814 394 aaKnown RBP10.68□□□□□ -0.7
GINS3-204ENST00000561952 MRS2Q9HD23 443 aa10.68□□□□□ -0.7
GINS3-204ENST00000561952 PLSCR2Q9NRY7 297 aa10.68□□□□□ -0.7
GINS3-204ENST00000561952 COL4A1P02462 1669 aa10.67□□□□□ -0.7
GINS3-204ENST00000561952 IQCA1LA6NCM1 817 aa10.67□□□□□ -0.7
GINS3-204ENST00000561952 ZNF316A6NFI3 1004 aaPredicted RBP10.67□□□□□ -0.7
GINS3-204ENST00000561952 PPIP5K2O43314 1243 aa10.67□□□□□ -0.7
GINS3-204ENST00000561952 ANP32CO43423 234 aa10.67□□□□□ -0.7
GINS3-204ENST00000561952 ZNF853P0CG23 659 aa10.67□□□□□ -0.7
GINS3-204ENST00000561952 EIF6P56537 245 aaKnown RBP10.67□□□□□ -0.7
GINS3-204ENST00000561952 GOLGA2Q08379 1002 aa10.67□□□□□ -0.7
GINS3-204ENST00000561952 AOC3Q16853 763 aa10.67□□□□□ -0.7
GINS3-204ENST00000561952 DDX46Q7L014 1031 aaKnown RBP10.67□□□□□ -0.7
GINS3-204ENST00000561952 RIC3Q7Z5B4 369 aa10.67□□□□□ -0.7
GINS3-204ENST00000561952 FAM89AQ96GI7 184 aa10.67□□□□□ -0.7
GINS3-204ENST00000561952 TAF1DQ9H5J8 278 aaPredicted RBP10.67□□□□□ -0.7
GINS3-204ENST00000561952 HYPKQ9NX55 129 aa10.67□□□□□ -0.7
GINS3-204ENST00000561952 LTBP1Q14766 1721 aa10.67□□□□□ -0.7
GINS3-204ENST00000561952 FZD9O00144 591 aa10.66□□□□□ -0.7
GINS3-204ENST00000561952 SLC10A5Q5PT55 438 aa10.66□□□□□ -0.7
GINS3-204ENST00000561952 CC2D2BQ6DHV5 1058 aa10.66□□□□□ -0.7
GINS3-204ENST00000561952 NIM1KQ8IY84 436 aa10.66□□□□□ -0.7
GINS3-204ENST00000561952 TSPYL6Q8N831 410 aa10.66□□□□□ -0.7
GINS3-204ENST00000561952 ZNF579Q8NAF0 562 aaKnown RBP10.66□□□□□ -0.7
GINS3-204ENST00000561952 JARID2Q92833 1246 aaPredicted RBP10.66□□□□□ -0.7
GINS3-204ENST00000561952 MYD88Q99836 296 aa10.66□□□□□ -0.7
GINS3-204ENST00000561952 HACL1Q9UJ83 578 aa10.66□□□□□ -0.7
GINS3-204ENST00000561952 ATP6V0A2Q9Y487 856 aa10.66□□□□□ -0.7
GINS3-204ENST00000561952 SPEF2Q9C093 1822 aa10.65□□□□□ -0.7
GINS3-204ENST00000561952 EPHX2P34913 555 aa10.65□□□□□ -0.7
GINS3-204ENST00000561952 GRAPQ13588 217 aa10.65□□□□□ -0.7
GINS3-204ENST00000561952 DPP8Q6V1X1 898 aaPredicted RBP10.65□□□□□ -0.7
GINS3-204ENST00000561952 GRAPLQ8TC17 118 aaPredicted RBP10.65□□□□□ -0.7
GINS3-204ENST00000561952 L3MBTL3Q96JM7 780 aaPredicted RBP10.65□□□□□ -0.7
GINS3-204ENST00000561952 CCDC85AQ96PX6 553 aaPredicted RBP10.65□□□□□ -0.7
GINS3-204ENST00000561952 ISCA1Q9BUE6 129 aa10.65□□□□□ -0.7
GINS3-204ENST00000561952 LRRC37AA6NMS7 1700 aa10.64□□□□□ -0.71
GINS3-204ENST00000561952 IRS4O14654 1257 aaPredicted RBP10.64□□□□□ -0.71
GINS3-204ENST00000561952 LMOD1P29536 600 aaPredicted RBP10.64□□□□□ -0.71
GINS3-204ENST00000561952 LDHDQ86WU2 507 aa10.64□□□□□ -0.71
GINS3-204ENST00000561952 GPC2Q8N158 579 aa10.64□□□□□ -0.71
GINS3-204ENST00000561952 MPNDQ8N594 471 aa10.64□□□□□ -0.71
GINS3-204ENST00000561952 CELF1Q92879 486 aaKnown RBP10.64□□□□□ -0.71
GINS3-204ENST00000561952 MKRN1Q9UHC7 482 aaKnown RBP10.64□□□□□ -0.71
GINS3-204ENST00000561952 ADAMTSL1Q8N6G6 1762 aa10.64□□□□□ -0.71
GINS3-204ENST00000561952 CCDC30Q5VVM6 783 aa10.63□□□□□ -0.71
GINS3-204ENST00000561952 MAP1SQ66K74 1059 aaPredicted RBP10.63□□□□□ -0.71
GINS3-204ENST00000561952 WWC1Q8IX03 1113 aa10.63□□□□□ -0.71
GINS3-204ENST00000561952 SP8Q8IXZ3 490 aa10.63□□□□□ -0.71
GINS3-204ENST00000561952 DUOX1Q9NRD9 1551 aa10.63□□□□□ -0.71
GINS3-204ENST00000561952 MYH3P11055 1940 aa10.62□□□□□ -0.71
GINS3-204ENST00000561952 RIMBP2O15034 1052 aa10.62□□□□□ -0.71
GINS3-204ENST00000561952 BBOX1O75936 387 aa10.62□□□□□ -0.71
GINS3-204ENST00000561952 RAD17O75943 681 aa10.62□□□□□ -0.71
GINS3-204ENST00000561952 DDX58O95786 925 aaKnown RBP10.62□□□□□ -0.71
GINS3-204ENST00000561952 EPS15P42566 896 aa10.62□□□□□ -0.71
GINS3-204ENST00000561952 GRIPAP1Q4V328 841 aa10.62□□□□□ -0.71
GINS3-204ENST00000561952 FAM9BQ8IZU0 186 aa10.62□□□□□ -0.71
GINS3-204ENST00000561952 SUPT20HQ8NEM7 779 aa10.62□□□□□ -0.71
GINS3-204ENST00000561952 GPR101Q96P66 508 aaPredicted RBP10.62□□□□□ -0.71
GINS3-204ENST00000561952 MAP3K2Q9Y2U5 619 aa10.62□□□□□ -0.71
GINS3-204ENST00000561952 SCNN1DP51172 638 aa10.61□□□□□ -0.71
GINS3-204ENST00000561952 TWISTNBQ3B726 338 aaPredicted RBP10.61□□□□□ -0.71
GINS3-204ENST00000561952 ZBTB38Q8NAP3 1195 aaPredicted RBP10.61□□□□□ -0.71
GINS3-204ENST00000561952 STK31Q9BXU1 1019 aa10.61□□□□□ -0.71
GINS3-204ENST00000561952 SEC31BQ9NQW1 1179 aa10.61□□□□□ -0.71
GINS3-204ENST00000561952 CWC25Q9NXE8 425 aaPredicted RBP10.61□□□□□ -0.71
GINS3-204ENST00000561952 NSFL1CQ9UNZ2 370 aaKnown RBP10.61□□□□□ -0.71
GINS3-204ENST00000561952 FANCIQ9NVI1 1328 aa10.6□□□□□ -0.71
GINS3-204ENST00000561952 C6orf229H3BNL8 230 aa10.6□□□□□ -0.71
GINS3-204ENST00000561952 GMPSP49915 693 aaPredicted RBP10.6□□□□□ -0.71
GINS3-204ENST00000561952 GPSM2P81274 684 aa10.6□□□□□ -0.71
GINS3-204ENST00000561952 FMR1Q06787 632 aaKnown RBP eCLIP10.6□□□□□ -0.71
GINS3-204ENST00000561952 CXCL9Q07325 125 aa10.6□□□□□ -0.71
GINS3-204ENST00000561952 SF3B3Q15393 1217 aaKnown RBP10.6□□□□□ -0.71
GINS3-204ENST00000561952 G2E3Q7L622 706 aa10.6□□□□□ -0.71
GINS3-204ENST00000561952 PNMA8AQ86V59 439 aaPredicted RBP10.6□□□□□ -0.71
GINS3-204ENST00000561952 CNTROBQ8N137 903 aa10.6□□□□□ -0.71
GINS3-204ENST00000561952 METTL22Q9BUU2 404 aaPredicted RBP10.6□□□□□ -0.71
GINS3-204ENST00000561952 BCL2L13Q9BXK5 485 aa10.6□□□□□ -0.71
GINS3-204ENST00000561952 RTFDC1Q9BY42 306 aaPredicted RBP10.6□□□□□ -0.71
GINS3-204ENST00000561952 DBNDD1Q9H9R9 158 aa10.6□□□□□ -0.71
GINS3-204ENST00000561952 CREBZFQ9NS37 354 aa10.6□□□□□ -0.71
GINS3-204ENST00000561952 ZNRF3Q9ULT6 936 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms