RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 NOM1Q5C9Z4 860 aaKnown RBP11.11□□□□□ -0.63
SMG1-204ENST00000561940 RARAP10276 462 aa11.1□□□□□ -0.63
SMG1-204ENST00000561940 ARID4AP29374 1257 aaPredicted RBP11.1□□□□□ -0.63
SMG1-204ENST00000561940 DNM1Q05193 864 aaKnown RBP11.1□□□□□ -0.63
SMG1-204ENST00000561940 TRIP4Q15650 581 aaPredicted RBP11.1□□□□□ -0.63
SMG1-204ENST00000561940 TNFRSF25Q93038 417 aa11.1□□□□□ -0.63
SMG1-204ENST00000561940 ADARB2-AS1A8MUL3 147 aa11.09□□□□□ -0.63
SMG1-204ENST00000561940 IRS1P35568 1242 aa11.09□□□□□ -0.63
SMG1-204ENST00000561940 EIF1AXP47813 144 aaKnown RBP11.09□□□□□ -0.63
SMG1-204ENST00000561940 MLLT1Q03111 559 aaPredicted RBP11.09□□□□□ -0.63
SMG1-204ENST00000561940 DNAJB12Q9NXW2 375 aaKnown RBP11.09□□□□□ -0.63
SMG1-204ENST00000561940 UBAP1LF5GYI3 381 aa11.08□□□□□ -0.64
SMG1-204ENST00000561940 FKBP4Q02790 459 aaKnown RBP eCLIP11.08□□□□□ -0.64
SMG1-204ENST00000561940 TXNDC2Q86VQ3 553 aa11.08□□□□□ -0.64
SMG1-204ENST00000561940 BEND7Q8N7W2 519 aaPredicted RBP11.08□□□□□ -0.64
SMG1-204ENST00000561940 EDEM1Q92611 657 aa11.08□□□□□ -0.64
SMG1-204ENST00000561940 NUDT16Q96DE0 195 aaKnown RBP11.08□□□□□ -0.64
SMG1-204ENST00000561940 SCARF2Q96GP6 870 aaPredicted RBP11.08□□□□□ -0.64
SMG1-204ENST00000561940 FAM13BQ9NYF5 915 aa11.08□□□□□ -0.64
SMG1-204ENST00000561940 GNEQ9Y223 722 aaKnown RBP11.08□□□□□ -0.64
SMG1-204ENST00000561940 HOXB4P17483 251 aaPredicted RBP11.07□□□□□ -0.64
SMG1-204ENST00000561940 C8orf86Q6ZUL3 223 aa11.07□□□□□ -0.64
SMG1-204ENST00000561940 PODNQ7Z5L7 613 aa11.07□□□□□ -0.64
SMG1-204ENST00000561940 MDFIQ99750 246 aa11.07□□□□□ -0.64
SMG1-204ENST00000561940 EGFRP00533 1210 aa11.06□□□□□ -0.64
SMG1-204ENST00000561940 MFAP1P55081 439 aaKnown RBP11.06□□□□□ -0.64
SMG1-204ENST00000561940 HFE2Q6ZVN8 426 aa11.06□□□□□ -0.64
SMG1-204ENST00000561940 DHX32Q7L7V1 743 aaKnown RBP11.06□□□□□ -0.64
SMG1-204ENST00000561940 EFCC1Q9HA90 598 aa11.06□□□□□ -0.64
SMG1-204ENST00000561940 SLC6A14Q9UN76 642 aa11.06□□□□□ -0.64
SMG1-204ENST00000561940 STARD13Q9Y3M8 1113 aa11.06□□□□□ -0.64
SMG1-204ENST00000561940 A6NHS1 94 aa11.05□□□□□ -0.64
SMG1-204ENST00000561940 ZBTB42B2RXF5 422 aa11.05□□□□□ -0.64
SMG1-204ENST00000561940 MMP20O60882 483 aa11.04□□□□□ -0.64
SMG1-204ENST00000561940 FAM13AO94988 1023 aa11.04□□□□□ -0.64
SMG1-204ENST00000561940 CPB1P15086 417 aa11.04□□□□□ -0.64
SMG1-204ENST00000561940 SF3B2Q13435 895 aaKnown RBP11.04□□□□□ -0.64
SMG1-204ENST00000561940 C8orf34Q49A92 452 aa11.04□□□□□ -0.64
SMG1-204ENST00000561940 LINC00114Q6XXX2 140 aa11.04□□□□□ -0.64
SMG1-204ENST00000561940 NUDT8Q8WV74 236 aa11.04□□□□□ -0.64
SMG1-204ENST00000561940 C11orf16Q9NQ32 467 aa11.04□□□□□ -0.64
SMG1-204ENST00000561940 MKL2Q9ULH7 1088 aa11.04□□□□□ -0.64
SMG1-204ENST00000561940 H3BRB1 525 aa11.03□□□□□ -0.64
SMG1-204ENST00000561940 M0R082 166 aa11.03□□□□□ -0.64
SMG1-204ENST00000561940 MAP3K6O95382 1288 aa11.03□□□□□ -0.64
SMG1-204ENST00000561940 ALBP02768 609 aa11.03□□□□□ -0.64
SMG1-204ENST00000561940 DGKGP49619 791 aa11.03□□□□□ -0.64
SMG1-204ENST00000561940 SND1Q7KZF4 910 aaKnown RBP eCLIP11.03□□□□□ -0.64
SMG1-204ENST00000561940 NLRP13Q86W25 1043 aa11.03□□□□□ -0.64
SMG1-204ENST00000561940 ZNF417Q8TAU3 575 aa11.03□□□□□ -0.64
SMG1-204ENST00000561940 ZNF587Q96SQ5 575 aaPredicted RBP11.03□□□□□ -0.64
SMG1-204ENST00000561940 GGNBP2Q9H3C7 697 aa11.03□□□□□ -0.64
SMG1-204ENST00000561940 TUT1Q9H6E5 874 aaKnown RBP11.03□□□□□ -0.64
SMG1-204ENST00000561940 POLIQ9UNA4 740 aa11.03□□□□□ -0.64
SMG1-204ENST00000561940 FNDC3AQ9Y2H6 1198 aaKnown RBP11.03□□□□□ -0.64
SMG1-204ENST00000561940 ICMTO60725 284 aa11.02□□□□□ -0.65
SMG1-204ENST00000561940 PDGFAP04085 211 aa11.02□□□□□ -0.65
SMG1-204ENST00000561940 FAM35AQ86V20 835 aa11.02□□□□□ -0.65
SMG1-204ENST00000561940 CCER1Q8TC90 406 aaPredicted RBP11.02□□□□□ -0.65
SMG1-204ENST00000561940 SUV39H2Q9H5I1 410 aa11.02□□□□□ -0.65
SMG1-204ENST00000561940 CCDC87Q9NVE4 849 aa11.02□□□□□ -0.65
SMG1-204ENST00000561940 TLR7Q9NYK1 1049 aaKnown RBP11.02□□□□□ -0.65
SMG1-204ENST00000561940 PHF20L1A8MW92 1017 aa11.01□□□□□ -0.65
SMG1-204ENST00000561940 J3QW42 95 aa11.01□□□□□ -0.65
SMG1-204ENST00000561940 PSAPP07602 524 aa11.01□□□□□ -0.65
SMG1-204ENST00000561940 NPR3P17342 541 aa11.01□□□□□ -0.65
SMG1-204ENST00000561940 RASSF7Q02833 373 aa11.01□□□□□ -0.65
SMG1-204ENST00000561940 ALKBH2Q6NS38 261 aa11.01□□□□□ -0.65
SMG1-204ENST00000561940 GLYCTKQ8IVS8 523 aa11.01□□□□□ -0.65
SMG1-204ENST00000561940 MICALL1Q8N3F8 863 aa11.01□□□□□ -0.65
SMG1-204ENST00000561940 NSUN5Q96P11 429 aaKnown RBP11.01□□□□□ -0.65
SMG1-204ENST00000561940 NAGPAQ9UK23 515 aa11.01□□□□□ -0.65
SMG1-204ENST00000561940 RNF225M0QZC1 329 aaPredicted RBP11□□□□□ -0.65
SMG1-204ENST00000561940 MZF1P28698 734 aaPredicted RBP11□□□□□ -0.65
SMG1-204ENST00000561940 GSK3AP49840 483 aa11□□□□□ -0.65
SMG1-204ENST00000561940 KCNMA1Q12791 1236 aa11□□□□□ -0.65
SMG1-204ENST00000561940 PSAPL1Q6NUJ1 521 aa11□□□□□ -0.65
SMG1-204ENST00000561940 TTC16Q8NEE8 873 aa11□□□□□ -0.65
SMG1-204ENST00000561940 PCSK2P16519 638 aa10.99□□□□□ -0.65
SMG1-204ENST00000561940 TTC39BQ5VTQ0 682 aaPredicted RBP10.99□□□□□ -0.65
SMG1-204ENST00000561940 ZNF438Q7Z4V0 828 aa10.99□□□□□ -0.65
SMG1-204ENST00000561940 RGS22Q8NE09 1264 aa10.99□□□□□ -0.65
SMG1-204ENST00000561940 TRPM4Q8TD43 1214 aa10.99□□□□□ -0.65
SMG1-204ENST00000561940 TMEM63CQ9P1W3 806 aa10.99□□□□□ -0.65
SMG1-204ENST00000561940 EGFL7Q9UHF1 273 aa10.99□□□□□ -0.65
SMG1-204ENST00000561940 FZD6O60353 706 aa10.98□□□□□ -0.65
SMG1-204ENST00000561940 C20orf204Q6ZNR8 217 aa10.98□□□□□ -0.65
SMG1-204ENST00000561940 ELP3Q9H9T3 547 aa10.98□□□□□ -0.65
SMG1-204ENST00000561940 JPH1Q9HDC5 661 aaPredicted RBP10.98□□□□□ -0.65
SMG1-204ENST00000561940 CYP2E1P05181 493 aaPredicted RBP10.97□□□□□ -0.65
SMG1-204ENST00000561940 PLAURQ03405 335 aa10.97□□□□□ -0.65
SMG1-204ENST00000561940 ECM1Q16610 540 aa10.97□□□□□ -0.65
SMG1-204ENST00000561940 PERM1Q5SV97 790 aa10.97□□□□□ -0.65
SMG1-204ENST00000561940 KANK3Q6NY19 840 aa10.97□□□□□ -0.65
SMG1-204ENST00000561940 LOC102724428A0A0B4J2F2 783 aa10.96□□□□□ -0.65
SMG1-204ENST00000561940 GNB5O14775 395 aa10.96□□□□□ -0.65
SMG1-204ENST00000561940 RGS9O75916 674 aaPredicted RBP10.96□□□□□ -0.65
SMG1-204ENST00000561940 GDF11O95390 407 aa10.96□□□□□ -0.65
SMG1-204ENST00000561940 EIF2AK2P19525 551 aaKnown RBP10.96□□□□□ -0.65
SMG1-204ENST00000561940 NRLP54845 237 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms