RNA–Protein interactions for RNA: ENST00000561707.1

COTL1-202, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 1 (best)

Gene COTL1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-202ENST00000561707 SMARCA5O60264 1052 aaPredicted RBP15.95■□□□□ 0.14
COTL1-202ENST00000561707 CTSWP56202 376 aa15.95■□□□□ 0.14
COTL1-202ENST00000561707 ZNF594Q96JF6 807 aaPredicted RBP15.95■□□□□ 0.14
COTL1-202ENST00000561707 BCL11AQ9H165 835 aa15.95■□□□□ 0.14
COTL1-202ENST00000561707 MMP10P09238 476 aa15.94■□□□□ 0.14
COTL1-202ENST00000561707 FAM161AQ3B820 660 aa15.94■□□□□ 0.14
COTL1-202ENST00000561707 PRR5LQ6MZQ0 368 aa15.94■□□□□ 0.14
COTL1-202ENST00000561707 GREM2Q9H772 168 aa15.94■□□□□ 0.14
COTL1-202ENST00000561707 NOP58Q9Y2X3 529 aaKnown RBP15.94■□□□□ 0.14
COTL1-202ENST00000561707 CARMIL3Q8ND23 1372 aa15.94■□□□□ 0.14
COTL1-202ENST00000561707 ABCC12Q96J65 1359 aa15.94■□□□□ 0.14
COTL1-202ENST00000561707 NPHP1O15259 732 aa15.93■□□□□ 0.14
COTL1-202ENST00000561707 NUCB1Q02818 461 aa15.93■□□□□ 0.14
COTL1-202ENST00000561707 PTPN12Q05209 780 aaKnown RBP15.93■□□□□ 0.14
COTL1-202ENST00000561707 LNPKQ9C0E8 428 aa15.93■□□□□ 0.14
COTL1-202ENST00000561707 SIL1Q9H173 461 aa15.93■□□□□ 0.14
COTL1-202ENST00000561707 TAF1P21675 1872 aa15.93■□□□□ 0.14
COTL1-202ENST00000561707 LAMB2P55268 1798 aa15.92■□□□□ 0.14
COTL1-202ENST00000561707 CASZ1Q86V15 1759 aa15.92■□□□□ 0.14
COTL1-202ENST00000561707 G3BP1Q13283 466 aaKnown RBP eCLIP15.92■□□□□ 0.14
COTL1-202ENST00000561707 CCDC57Q2TAC2 916 aa15.92■□□□□ 0.14
COTL1-202ENST00000561707 C16orf71Q8IYS4 520 aaPredicted RBP15.92■□□□□ 0.14
COTL1-202ENST00000561707 CNBD1Q8NA66 436 aa15.92■□□□□ 0.14
COTL1-202ENST00000561707 COPRSQ9NQ92 184 aa15.92■□□□□ 0.14
COTL1-202ENST00000561707 SEC31BQ9NQW1 1179 aa15.92■□□□□ 0.14
COTL1-202ENST00000561707 ITGA6P23229 1130 aa15.91■□□□□ 0.14
COTL1-202ENST00000561707 PDE4AP27815 886 aa15.91■□□□□ 0.14
COTL1-202ENST00000561707 IFIT5Q13325 482 aaKnown RBP15.91■□□□□ 0.14
COTL1-202ENST00000561707 R3HDM1Q15032 1099 aaKnown RBP15.91■□□□□ 0.14
COTL1-202ENST00000561707 SF3B3Q15393 1217 aaKnown RBP15.91■□□□□ 0.14
COTL1-202ENST00000561707 CHD1LQ86WJ1 897 aa15.91■□□□□ 0.14
COTL1-202ENST00000561707 NLRP3Q96P20 1036 aa15.91■□□□□ 0.14
COTL1-202ENST00000561707 PUS3Q9BZE2 481 aaKnown RBP15.91■□□□□ 0.14
COTL1-202ENST00000561707 PARP3Q9Y6F1 533 aa15.91■□□□□ 0.14
COTL1-202ENST00000561707 ANKRD18BA2A2Z9 1011 aa15.9■□□□□ 0.14
COTL1-202ENST00000561707 RAB11FIP3O75154 756 aa15.9■□□□□ 0.14
COTL1-202ENST00000561707 SASH1O94885 1247 aa15.9■□□□□ 0.14
COTL1-202ENST00000561707 HSP90B1P14625 803 aaKnown RBP15.9■□□□□ 0.14
COTL1-202ENST00000561707 RGS3P49796 1198 aa15.9■□□□□ 0.14
COTL1-202ENST00000561707 OS9Q13438 667 aaPredicted RBP15.9■□□□□ 0.14
COTL1-202ENST00000561707 LRRC24Q50LG9 513 aa15.9■□□□□ 0.14
COTL1-202ENST00000561707 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.9■□□□□ 0.14
COTL1-202ENST00000561707 PSDA5PKW4 1024 aaPredicted RBP15.89■□□□□ 0.13
COTL1-202ENST00000561707 CCDC152Q4G0S7 254 aa15.89■□□□□ 0.13
COTL1-202ENST00000561707 TAF7LQ5H9L4 462 aa15.89■□□□□ 0.13
COTL1-202ENST00000561707 RHPN1Q8TCX5 695 aa15.89■□□□□ 0.13
COTL1-202ENST00000561707 IL1RAPL2Q9NP60 686 aa15.89■□□□□ 0.13
COTL1-202ENST00000561707 ZBTB7AO95365 584 aa15.88■□□□□ 0.13
COTL1-202ENST00000561707 ST5P78524 1137 aa15.88■□□□□ 0.13
COTL1-202ENST00000561707 HSP90AB4PQ58FF6 505 aa15.88■□□□□ 0.13
COTL1-202ENST00000561707 ATG9AQ7Z3C6 839 aa15.88■□□□□ 0.13
COTL1-202ENST00000561707 OTUD7AQ8TE49 926 aaPredicted RBP15.88■□□□□ 0.13
COTL1-202ENST00000561707 SLC16A10Q8TF71 515 aa15.88■□□□□ 0.13
COTL1-202ENST00000561707 LRRCC1Q9C099 1032 aa15.88■□□□□ 0.13
COTL1-202ENST00000561707 ATF5Q9Y2D1 282 aaPredicted RBP15.88■□□□□ 0.13
COTL1-202ENST00000561707 TNRC6CQ9HCJ0 1690 aaKnown RBP15.87■□□□□ 0.13
COTL1-202ENST00000561707 EYA2O00167 538 aa15.87■□□□□ 0.13
COTL1-202ENST00000561707 KIF1BPQ96EK5 621 aa15.87■□□□□ 0.13
COTL1-202ENST00000561707 ANKRD31Q8N7Z5 1873 aa15.86■□□□□ 0.13
COTL1-202ENST00000561707 COL4A1P02462 1669 aa15.86■□□□□ 0.13
COTL1-202ENST00000561707 NRXN2Q9P2S2 1712 aa15.86■□□□□ 0.13
COTL1-202ENST00000561707 TFCP2Q12800 502 aa15.86■□□□□ 0.13
COTL1-202ENST00000561707 ZBTB47Q9UFB7 747 aaPredicted RBP15.86■□□□□ 0.13
COTL1-202ENST00000561707 RIPOR2Q9Y4F9 1068 aa15.86■□□□□ 0.13
COTL1-202ENST00000561707 SPEF2Q9C093 1822 aa15.86■□□□□ 0.13
COTL1-202ENST00000561707 RTL9Q8NET4 1388 aa15.86■□□□□ 0.13
COTL1-202ENST00000561707 LDHAL6AQ6ZMR3 332 aa15.85■□□□□ 0.13
COTL1-202ENST00000561707 ERC1Q8IUD2 1116 aa15.85■□□□□ 0.13
COTL1-202ENST00000561707 CELF1Q92879 486 aaKnown RBP15.85■□□□□ 0.13
COTL1-202ENST00000561707 BRIP1Q9BX63 1249 aa15.85■□□□□ 0.13
COTL1-202ENST00000561707 CIAO1O76071 339 aa15.84■□□□□ 0.13
COTL1-202ENST00000561707 CNNM1Q9NRU3 951 aa15.84■□□□□ 0.13
COTL1-202ENST00000561707 IL15P40933 162 aaPredicted RBP15.83■□□□□ 0.12
COTL1-202ENST00000561707 RPS8P62241 208 aaKnown RBP15.83■□□□□ 0.12
COTL1-202ENST00000561707 DDX46Q7L014 1031 aaKnown RBP15.83■□□□□ 0.12
COTL1-202ENST00000561707 PLEKHM2Q8IWE5 1019 aa15.83■□□□□ 0.12
COTL1-202ENST00000561707 HELBQ8NG08 1087 aaPredicted RBP15.83■□□□□ 0.12
COTL1-202ENST00000561707 EAF2Q96CJ1 260 aaPredicted RBP15.83■□□□□ 0.12
COTL1-202ENST00000561707 KLRG2A4D1S0 409 aaPredicted RBP15.82■□□□□ 0.12
COTL1-202ENST00000561707 IGHMBP2P38935 993 aaKnown RBP15.82■□□□□ 0.12
COTL1-202ENST00000561707 ANKRD18AQ8IVF6 992 aa15.82■□□□□ 0.12
COTL1-202ENST00000561707 RPGRQ92834 1020 aaKnown RBP15.82■□□□□ 0.12
COTL1-202ENST00000561707 CDC5LQ99459 802 aaKnown RBP15.82■□□□□ 0.12
COTL1-202ENST00000561707 MPHOSPH8Q99549 860 aa15.82■□□□□ 0.12
COTL1-202ENST00000561707 CCDC8Q9H0W5 538 aaPredicted RBP15.82■□□□□ 0.12
COTL1-202ENST00000561707 CEP126Q9P2H0 1117 aa15.82■□□□□ 0.12
COTL1-202ENST00000561707 RIC1Q4ADV7 1423 aa15.82■□□□□ 0.12
COTL1-202ENST00000561707 TIMM10P62072 90 aa15.81■□□□□ 0.12
COTL1-202ENST00000561707 CRY2Q49AN0 593 aa15.81■□□□□ 0.12
COTL1-202ENST00000561707 METTL24Q5JXM2 366 aa15.81■□□□□ 0.12
COTL1-202ENST00000561707 SLC51AQ86UW1 340 aa15.81■□□□□ 0.12
COTL1-202ENST00000561707 AACSQ86V21 672 aa15.81■□□□□ 0.12
COTL1-202ENST00000561707 CLASRPQ8N2M8 674 aaKnown RBP15.81■□□□□ 0.12
COTL1-202ENST00000561707 MTFR1LQ9H019 292 aa15.81■□□□□ 0.12
COTL1-202ENST00000561707 FBXO3Q9UK99 471 aa15.81■□□□□ 0.12
COTL1-202ENST00000561707 HOXA10P31260 410 aaPredicted RBP15.8■□□□□ 0.12
COTL1-202ENST00000561707 PDE6BP35913 854 aa15.8■□□□□ 0.12
COTL1-202ENST00000561707 C2CD5Q86YS7 1000 aa15.8■□□□□ 0.12
COTL1-202ENST00000561707 RBM17Q96I25 401 aaKnown RBP15.8■□□□□ 0.12
COTL1-202ENST00000561707 SALL3Q9BXA9 1300 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms