RNA–Protein interactions for RNA: ENST00000561662.1

COMMD4-204, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-204ENST00000561662 CNOT7Q9UIV1 285 aaKnown RBP24.16■■□□□ 1.46
COMMD4-204ENST00000561662 PDE4DIPQ5VU43 2346 aa24.15■■□□□ 1.46
COMMD4-204ENST00000561662 NOGQ13253 232 aa24.15■■□□□ 1.46
COMMD4-204ENST00000561662 GIGYF2Q6Y7W6 1299 aaKnown RBP24.15■■□□□ 1.46
COMMD4-204ENST00000561662 SUPT20HQ8NEM7 779 aa24.15■■□□□ 1.46
COMMD4-204ENST00000561662 RTFDC1Q9BY42 306 aaPredicted RBP24.15■■□□□ 1.46
COMMD4-204ENST00000561662 YDJCA8MPS7 323 aa24.14■■□□□ 1.45
COMMD4-204ENST00000561662 MPNDQ8N594 471 aa24.14■■□□□ 1.45
COMMD4-204ENST00000561662 ZBTB12Q9Y330 459 aaPredicted RBP24.14■■□□□ 1.45
COMMD4-204ENST00000561662 HCLS1P14317 486 aaPredicted RBP24.13■■□□□ 1.45
COMMD4-204ENST00000561662 PPP2R1AP30153 589 aa24.13■■□□□ 1.45
COMMD4-204ENST00000561662 KIAA2012Q0VF49 1180 aa24.13■■□□□ 1.45
COMMD4-204ENST00000561662 MICALL2Q8IY33 904 aa24.13■■□□□ 1.45
COMMD4-204ENST00000561662 ZC3H15Q8WU90 426 aaKnown RBP24.13■■□□□ 1.45
COMMD4-204ENST00000561662 UTP14AQ9BVJ6 771 aaKnown RBP24.13■■□□□ 1.45
COMMD4-204ENST00000561662 VPS33BQ9H267 617 aa24.13■■□□□ 1.45
COMMD4-204ENST00000561662 KDM3BQ7LBC6 1761 aa24.12■■□□□ 1.45
COMMD4-204ENST00000561662 ANXA1P04083 346 aa24.12■■□□□ 1.45
COMMD4-204ENST00000561662 TNIP1Q15025 636 aa24.12■■□□□ 1.45
COMMD4-204ENST00000561662 SAMD7Q7Z3H4 446 aa24.12■■□□□ 1.45
COMMD4-204ENST00000561662 PARP10Q53GL7 1025 aa24.11■■□□□ 1.45
COMMD4-204ENST00000561662 SP8Q8IXZ3 490 aa24.11■■□□□ 1.45
COMMD4-204ENST00000561662 FAM155AB1AL88 458 aaPredicted RBP24.1■■□□□ 1.45
COMMD4-204ENST00000561662 H7C1D1 291 aa24.1■■□□□ 1.45
COMMD4-204ENST00000561662 EGFRP00533 1210 aa24.1■■□□□ 1.45
COMMD4-204ENST00000561662 TBC1D10BQ4KMP7 808 aaPredicted RBP24.1■■□□□ 1.45
COMMD4-204ENST00000561662 PNISRQ8TF01 805 aaKnown RBP24.1■■□□□ 1.45
COMMD4-204ENST00000561662 CDHR2Q9BYE9 1310 aa24.1■■□□□ 1.45
COMMD4-204ENST00000561662 ADM5C9JUS6 153 aa24.09■■□□□ 1.45
COMMD4-204ENST00000561662 TRPA1O75762 1119 aa24.09■■□□□ 1.45
COMMD4-204ENST00000561662 EIF2S2P20042 333 aaKnown RBP24.09■■□□□ 1.45
COMMD4-204ENST00000561662 PROSER3Q2NL68 480 aa24.09■■□□□ 1.45
COMMD4-204ENST00000561662 SLC10A5Q5PT55 438 aa24.09■■□□□ 1.45
COMMD4-204ENST00000561662 RBM26Q5T8P6 1007 aaKnown RBP24.09■■□□□ 1.45
COMMD4-204ENST00000561662 KRT26Q7Z3Y9 468 aa24.09■■□□□ 1.45
COMMD4-204ENST00000561662 BBOX1O75936 387 aa24.08■■□□□ 1.45
COMMD4-204ENST00000561662 KIF23Q02241 960 aaPredicted RBP24.08■■□□□ 1.45
COMMD4-204ENST00000561662 RGMBQ6NW40 437 aa24.08■■□□□ 1.45
COMMD4-204ENST00000561662 PSMD14O00487 310 aa24.07■■□□□ 1.44
COMMD4-204ENST00000561662 DBNDD1Q9H9R9 158 aa24.07■■□□□ 1.44
COMMD4-204ENST00000561662 GBA2Q9HCG7 927 aaPredicted RBP24.07■■□□□ 1.44
COMMD4-204ENST00000561662 DLG5Q8TDM6 1919 aa24.07■■□□□ 1.44
COMMD4-204ENST00000561662 TAF1P21675 1872 aa24.07■■□□□ 1.44
COMMD4-204ENST00000561662 ZNF157P51786 506 aaPredicted RBP24.06■■□□□ 1.44
COMMD4-204ENST00000561662 DDX46Q7L014 1031 aaKnown RBP24.06■■□□□ 1.44
COMMD4-204ENST00000561662 NECTIN2Q92692 538 aa24.06■■□□□ 1.44
COMMD4-204ENST00000561662 RNF186Q9NXI6 227 aa24.06■■□□□ 1.44
COMMD4-204ENST00000561662 LAMB2P55268 1798 aa24.06■■□□□ 1.44
COMMD4-204ENST00000561662 RIMBP2O15034 1052 aa24.05■■□□□ 1.44
COMMD4-204ENST00000561662 PDIA6Q15084 440 aa24.05■■□□□ 1.44
COMMD4-204ENST00000561662 LRP10Q7Z4F1 713 aa24.05■■□□□ 1.44
COMMD4-204ENST00000561662 AIMP1Q12904 312 aaKnown RBP24.04■■□□□ 1.44
COMMD4-204ENST00000561662 GRAPQ13588 217 aa24.04■■□□□ 1.44
COMMD4-204ENST00000561662 C2orf69Q8N8R5 385 aa24.04■■□□□ 1.44
COMMD4-204ENST00000561662 GRAPLQ8TC17 118 aaPredicted RBP24.04■■□□□ 1.44
COMMD4-204ENST00000561662 KCNQ5Q9NR82 932 aa24.04■■□□□ 1.44
COMMD4-204ENST00000561662 DUOX1Q9NRD9 1551 aa24.03■■□□□ 1.44
COMMD4-204ENST00000561662 NEFMP07197 916 aa24.03■■□□□ 1.44
COMMD4-204ENST00000561662 NLRP10Q86W26 655 aa24.03■■□□□ 1.44
COMMD4-204ENST00000561662 TRMT112Q9UI30 125 aaKnown RBP24.03■■□□□ 1.44
COMMD4-204ENST00000561662 POLR2AP24928 1970 aaKnown RBP24.02■■□□□ 1.44
COMMD4-204ENST00000561662 SAGE1Q9NXZ1 904 aa24.02■■□□□ 1.44
COMMD4-204ENST00000561662 DOK7Q18PE1 504 aa24.01■■□□□ 1.43
COMMD4-204ENST00000561662 DCPSQ96C86 337 aaKnown RBP24.01■■□□□ 1.43
COMMD4-204ENST00000561662 TSPYL4Q9UJ04 414 aa24.01■■□□□ 1.43
COMMD4-204ENST00000561662 ASTN2O75129 1339 aaPredicted RBP24.01■■□□□ 1.43
COMMD4-204ENST00000561662 ERBB4Q15303 1308 aa24.01■■□□□ 1.43
COMMD4-204ENST00000561662 ZNF316A6NFI3 1004 aaPredicted RBP24■■□□□ 1.43
COMMD4-204ENST00000561662 NFE2L2Q16236 605 aa24■■□□□ 1.43
COMMD4-204ENST00000561662 WASHC4Q2M389 1173 aa24■■□□□ 1.43
COMMD4-204ENST00000561662 COPS6Q7L5N1 327 aa24■■□□□ 1.43
COMMD4-204ENST00000561662 DPF2Q92785 391 aa24■■□□□ 1.43
COMMD4-204ENST00000561662 CCDC102AQ96A19 550 aa24■■□□□ 1.43
COMMD4-204ENST00000561662 CSRNP1Q96S65 589 aa24■■□□□ 1.43
COMMD4-204ENST00000561662 NSFL1CQ9UNZ2 370 aaKnown RBP24■■□□□ 1.43
COMMD4-204ENST00000561662 XAGE3Q8WTP9 111 aa23.99■■□□□ 1.43
COMMD4-204ENST00000561662 PLEKHF1Q96S99 279 aa23.99■■□□□ 1.43
COMMD4-204ENST00000561662 ANKRD36CQ5JPF3 1778 aa23.98■■□□□ 1.43
COMMD4-204ENST00000561662 C6orf229H3BNL8 230 aa23.98■■□□□ 1.43
COMMD4-204ENST00000561662 ECE2O60344 883 aa23.97■■□□□ 1.43
COMMD4-204ENST00000561662 SLC10A3P09131 477 aa23.97■■□□□ 1.43
COMMD4-204ENST00000561662 RTL9Q8NET4 1388 aa23.97■■□□□ 1.43
COMMD4-204ENST00000561662 SH3TC1Q8TE82 1336 aa23.97■■□□□ 1.43
COMMD4-204ENST00000561662 CELF1Q92879 486 aaKnown RBP23.97■■□□□ 1.43
COMMD4-204ENST00000561662 GGA3Q9NZ52 723 aa23.97■■□□□ 1.43
COMMD4-204ENST00000561662 POLLQ9UGP5 575 aa23.97■■□□□ 1.43
COMMD4-204ENST00000561662 GPSM2P81274 684 aa23.96■■□□□ 1.43
COMMD4-204ENST00000561662 KIF4BQ2VIQ3 1234 aa23.96■■□□□ 1.43
COMMD4-204ENST00000561662 CTU1Q7Z7A3 348 aaKnown RBP23.96■■□□□ 1.43
COMMD4-204ENST00000561662 TCIRG1Q13488 830 aa23.95■■□□□ 1.42
COMMD4-204ENST00000561662 PRPF38BQ5VTL8 546 aaKnown RBP23.95■■□□□ 1.42
COMMD4-204ENST00000561662 COL4A1P02462 1669 aa23.95■■□□□ 1.42
COMMD4-204ENST00000561662 AKAP11Q9UKA4 1901 aa23.94■■□□□ 1.42
COMMD4-204ENST00000561662 HSP90AB3PQ58FF7 597 aa23.94■■□□□ 1.42
COMMD4-204ENST00000561662 RTL5Q5HYW3 569 aaPredicted RBP23.94■■□□□ 1.42
COMMD4-204ENST00000561662 SULF1Q8IWU6 871 aa23.94■■□□□ 1.42
COMMD4-204ENST00000561662 CDCA5Q96FF9 252 aa23.94■■□□□ 1.42
COMMD4-204ENST00000561662 HPS5Q9UPZ3 1129 aa23.94■■□□□ 1.42
COMMD4-204ENST00000561662 SCAF8Q9UPN6 1271 aaKnown RBP23.93■■□□□ 1.42
COMMD4-204ENST00000561662 LRRC37AA6NMS7 1700 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms