RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 COBLO75128 1261 aa5.22□□□□□ -1.57
SPG11-225ENST00000561391 CHRNA4P43681 627 aa5.22□□□□□ -1.57
SPG11-225ENST00000561391 SLCO4C1Q6ZQN7 724 aa5.22□□□□□ -1.57
SPG11-225ENST00000561391 CCDC82Q8N4S0 544 aa5.22□□□□□ -1.57
SPG11-225ENST00000561391 CCDC97Q96F63 343 aaPredicted RBP5.22□□□□□ -1.57
SPG11-225ENST00000561391 CEP350Q5VT06 3117 aa5.22□□□□□ -1.57
SPG11-225ENST00000561391 CDC42BPBQ9Y5S2 1711 aa5.22□□□□□ -1.57
SPG11-225ENST00000561391 PRDM15P57071 1507 aaPredicted RBP5.22□□□□□ -1.57
SPG11-225ENST00000561391 A0A1B0GTH6 734 aa5.21□□□□□ -1.58
SPG11-225ENST00000561391 GTF2E1P29083 439 aaPredicted RBP5.21□□□□□ -1.58
SPG11-225ENST00000561391 PHKA2P46019 1235 aa5.21□□□□□ -1.58
SPG11-225ENST00000561391 ERVK-9P63128 1117 aa5.21□□□□□ -1.58
SPG11-225ENST00000561391 DOC2BQ14184 412 aa5.21□□□□□ -1.58
SPG11-225ENST00000561391 EFHC2Q5JST6 749 aa5.21□□□□□ -1.58
SPG11-225ENST00000561391 RNF20Q5VTR2 975 aa5.21□□□□□ -1.58
SPG11-225ENST00000561391 ADAMTS19Q8TE59 1207 aa5.21□□□□□ -1.58
SPG11-225ENST00000561391 C19orf44Q9H6X5 657 aa5.21□□□□□ -1.58
SPG11-225ENST00000561391 RAB6BQ9NRW1 208 aa5.21□□□□□ -1.58
SPG11-225ENST00000561391 GGA1Q9UJY5 639 aa5.21□□□□□ -1.58
SPG11-225ENST00000561391 RTEL1-TNFRSF6BF6WH68 1400 aa5.21□□□□□ -1.58
SPG11-225ENST00000561391 ATRNO75882 1429 aa5.21□□□□□ -1.58
SPG11-225ENST00000561391 ADGBQ8N7X0 1667 aa5.21□□□□□ -1.58
SPG11-225ENST00000561391 DIP2AQ14689 1571 aa5.21□□□□□ -1.58
SPG11-225ENST00000561391 NCOA2Q15596 1464 aa5.2□□□□□ -1.58
SPG11-225ENST00000561391 AHDC1Q5TGY3 1603 aaPredicted RBP5.2□□□□□ -1.58
SPG11-225ENST00000561391 PRELPP51888 382 aa5.2□□□□□ -1.58
SPG11-225ENST00000561391 COL13A1Q5TAT6 717 aaPredicted RBP5.2□□□□□ -1.58
SPG11-225ENST00000561391 ALG2Q9H553 416 aa5.2□□□□□ -1.58
SPG11-225ENST00000561391 RUBCNLQ9H714 662 aa5.2□□□□□ -1.58
SPG11-225ENST00000561391 SERPINA10Q9UK55 444 aa5.2□□□□□ -1.58
SPG11-225ENST00000561391 ATXN7L1Q9ULK2 861 aaPredicted RBP5.2□□□□□ -1.58
SPG11-225ENST00000561391 PNPLA6Q8IY17 1366 aa5.19□□□□□ -1.58
SPG11-225ENST00000561391 CAMTA1Q9Y6Y1 1673 aa5.19□□□□□ -1.58
SPG11-225ENST00000561391 THBS1P07996 1170 aa5.19□□□□□ -1.58
SPG11-225ENST00000561391 FGFR3P22607 806 aa5.19□□□□□ -1.58
SPG11-225ENST00000561391 RFX1P22670 979 aa5.19□□□□□ -1.58
SPG11-225ENST00000561391 SOX11P35716 441 aa5.19□□□□□ -1.58
SPG11-225ENST00000561391 LBRQ14739 615 aaKnown RBP5.19□□□□□ -1.58
SPG11-225ENST00000561391 EZH2Q15910 746 aaKnown RBP5.19□□□□□ -1.58
SPG11-225ENST00000561391 GNASQ5JWF2 1037 aa5.19□□□□□ -1.58
SPG11-225ENST00000561391 LINC00114Q6XXX2 140 aa5.19□□□□□ -1.58
SPG11-225ENST00000561391 SPON1Q9HCB6 807 aa5.19□□□□□ -1.58
SPG11-225ENST00000561391 PCDHB11Q9Y5F2 797 aa5.19□□□□□ -1.58
SPG11-225ENST00000561391 TROQ12816 1431 aaPredicted RBP5.19□□□□□ -1.58
SPG11-225ENST00000561391 SETD5Q9C0A6 1442 aa5.19□□□□□ -1.58
SPG11-225ENST00000561391 PLXNC1O60486 1568 aa5.19□□□□□ -1.58
SPG11-225ENST00000561391 TIAM1Q13009 1591 aa5.19□□□□□ -1.58
SPG11-225ENST00000561391 PRXQ9BXM0 1461 aa5.19□□□□□ -1.58
SPG11-225ENST00000561391 CFAP65Q6ZU64 1925 aaKnown RBP5.19□□□□□ -1.58
SPG11-225ENST00000561391 DHX29Q7Z478 1369 aaKnown RBP5.18□□□□□ -1.58
SPG11-225ENST00000561391 CLIP1P30622 1438 aa5.18□□□□□ -1.58
SPG11-225ENST00000561391 KCNQ2O43526 872 aa5.18□□□□□ -1.58
SPG11-225ENST00000561391 ITGB7P26010 798 aa5.18□□□□□ -1.58
SPG11-225ENST00000561391 GATA4P43694 442 aa5.18□□□□□ -1.58
SPG11-225ENST00000561391 SCTRP47872 440 aa5.18□□□□□ -1.58
SPG11-225ENST00000561391 SLFNL1Q499Z3 407 aa5.18□□□□□ -1.58
SPG11-225ENST00000561391 TMEM214Q6NUQ4 689 aaKnown RBP5.18□□□□□ -1.58
SPG11-225ENST00000561391 KRT27Q7Z3Y8 459 aa5.18□□□□□ -1.58
SPG11-225ENST00000561391 RNF135Q8IUD6 432 aa5.18□□□□□ -1.58
SPG11-225ENST00000561391 ABHD17AQ96GS6 310 aa5.18□□□□□ -1.58
SPG11-225ENST00000561391 ZSCAN10Q96SZ4 725 aaPredicted RBP5.18□□□□□ -1.58
SPG11-225ENST00000561391 CEP126Q9P2H0 1117 aa5.18□□□□□ -1.58
SPG11-225ENST00000561391 TFIP11Q9UBB9 837 aaKnown RBP5.18□□□□□ -1.58
SPG11-225ENST00000561391 ABCC3O15438 1527 aa5.18□□□□□ -1.58
SPG11-225ENST00000561391 NEURL1BA8MQ27 555 aa5.17□□□□□ -1.58
SPG11-225ENST00000561391 PPP1R15AO75807 674 aaPredicted RBP5.17□□□□□ -1.58
SPG11-225ENST00000561391 EPXP11678 715 aa5.17□□□□□ -1.58
SPG11-225ENST00000561391 HOXB4P17483 251 aaPredicted RBP5.17□□□□□ -1.58
SPG11-225ENST00000561391 DGKGP49619 791 aa5.17□□□□□ -1.58
SPG11-225ENST00000561391 FAM182BQ5T319 152 aa5.17□□□□□ -1.58
SPG11-225ENST00000561391 TNS4Q8IZW8 715 aa5.17□□□□□ -1.58
SPG11-225ENST00000561391 ZNF592Q92610 1267 aa5.17□□□□□ -1.58
SPG11-225ENST00000561391 CNKSR1Q969H4 720 aa5.17□□□□□ -1.58
SPG11-225ENST00000561391 BTBD6Q96KE9 485 aa5.17□□□□□ -1.58
SPG11-225ENST00000561391 KDM5AP29375 1690 aaKnown RBP5.17□□□□□ -1.58
SPG11-225ENST00000561391 UBR1Q8IWV7 1749 aa5.17□□□□□ -1.58
SPG11-225ENST00000561391 TMEM2Q9UHN6 1383 aa5.16□□□□□ -1.58
SPG11-225ENST00000561391 ARHGAP23Q9P227 1491 aa5.16□□□□□ -1.58
SPG11-225ENST00000561391 PALM3A6NDB9 673 aaPredicted RBP5.16□□□□□ -1.58
SPG11-225ENST00000561391 PIK3CDO00329 1044 aa5.16□□□□□ -1.58
SPG11-225ENST00000561391 LMOD1P29536 600 aaPredicted RBP5.16□□□□□ -1.58
SPG11-225ENST00000561391 MCCD1P59942 119 aaPredicted RBP5.16□□□□□ -1.58
SPG11-225ENST00000561391 TBC1D9Q6ZT07 1266 aa5.16□□□□□ -1.58
SPG11-225ENST00000561391 CHSY3Q70JA7 882 aa5.16□□□□□ -1.58
SPG11-225ENST00000561391 ESYT1Q9BSJ8 1104 aa5.16□□□□□ -1.58
SPG11-225ENST00000561391 PPP1R12CQ9BZL4 782 aa5.16□□□□□ -1.58
SPG11-225ENST00000561391 OSBPL3Q9H4L5 887 aa5.16□□□□□ -1.58
SPG11-225ENST00000561391 CFDP1Q9UEE9 299 aaPredicted RBP5.16□□□□□ -1.58
SPG11-225ENST00000561391 CCDC9Q9Y3X0 531 aaKnown RBP5.16□□□□□ -1.58
SPG11-225ENST00000561391 SLIT1O75093 1534 aa5.16□□□□□ -1.58
SPG11-225ENST00000561391 SYCP2Q9BX26 1530 aa5.16□□□□□ -1.58
SPG11-225ENST00000561391 MAST1Q9Y2H9 1570 aa5.16□□□□□ -1.58
SPG11-225ENST00000561391 NINLQ9Y2I6 1382 aa5.16□□□□□ -1.58
SPG11-225ENST00000561391 NKTRP30414 1462 aaKnown RBP5.15□□□□□ -1.58
SPG11-225ENST00000561391 C2CD2LO14523 706 aa5.15□□□□□ -1.59
SPG11-225ENST00000561391 GNRH1P01148 92 aa5.15□□□□□ -1.59
SPG11-225ENST00000561391 ARAFP10398 606 aa5.15□□□□□ -1.59
SPG11-225ENST00000561391 SKIP12755 728 aa5.15□□□□□ -1.59
SPG11-225ENST00000561391 HSPA6P17066 643 aa5.15□□□□□ -1.59
SPG11-225ENST00000561391 MSX1P28360 303 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms