RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 NFIAQ12857 509 aa8.52□□□□□ -1.05
USP8-216ENST00000561206 LCE4AQ5TA78 99 aa8.52□□□□□ -1.05
USP8-216ENST00000561206 DHX32Q7L7V1 743 aaKnown RBP8.52□□□□□ -1.05
USP8-216ENST00000561206 ZFATQ9P243 1243 aa8.52□□□□□ -1.05
USP8-216ENST00000561206 TGFBR3LH3BV60 316 aa8.51□□□□□ -1.05
USP8-216ENST00000561206 SKIP12755 728 aa8.51□□□□□ -1.05
USP8-216ENST00000561206 POU5F2Q8N7G0 328 aa8.51□□□□□ -1.05
USP8-216ENST00000561206 UBL7Q96S82 380 aaPredicted RBP8.51□□□□□ -1.05
USP8-216ENST00000561206 C21orf2O43822 256 aa8.5□□□□□ -1.05
USP8-216ENST00000561206 OGFOD2Q6N063 350 aa8.5□□□□□ -1.05
USP8-216ENST00000561206 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.5□□□□□ -1.05
USP8-216ENST00000561206 TRIM50Q86XT4 487 aa8.5□□□□□ -1.05
USP8-216ENST00000561206 C2orf49Q9BVC5 232 aaPredicted RBP8.5□□□□□ -1.05
USP8-216ENST00000561206 DHX15O43143 795 aaKnown RBP8.49□□□□□ -1.05
USP8-216ENST00000561206 SETDB1Q15047 1291 aa8.49□□□□□ -1.05
USP8-216ENST00000561206 ARMC10Q8N2F6 343 aa8.49□□□□□ -1.05
USP8-216ENST00000561206 TPCN2Q8NHX9 752 aa8.49□□□□□ -1.05
USP8-216ENST00000561206 SMG9Q9H0W8 520 aaKnown RBP8.49□□□□□ -1.05
USP8-216ENST00000561206 GDPD2Q9HCC8 539 aa8.49□□□□□ -1.05
USP8-216ENST00000561206 GLB1P16278 677 aa8.48□□□□□ -1.05
USP8-216ENST00000561206 NRLP54845 237 aa8.48□□□□□ -1.05
USP8-216ENST00000561206 UVSSAQ2YD98 709 aa8.48□□□□□ -1.05
USP8-216ENST00000561206 RNF43Q68DV7 783 aa8.48□□□□□ -1.05
USP8-216ENST00000561206 DBNDD2Q9BQY9 259 aa8.48□□□□□ -1.05
USP8-216ENST00000561206 KRTAP17-1Q9BYP8 105 aa8.48□□□□□ -1.05
USP8-216ENST00000561206 KIAA1024Q9UPX6 916 aa8.48□□□□□ -1.05
USP8-216ENST00000561206 BCS1LQ9Y276 419 aa8.48□□□□□ -1.05
USP8-216ENST00000561206 PPP1R12BO60237 982 aaPredicted RBP8.47□□□□□ -1.05
USP8-216ENST00000561206 EPB42P16452 691 aa8.47□□□□□ -1.05
USP8-216ENST00000561206 INPP5BP32019 993 aa8.47□□□□□ -1.05
USP8-216ENST00000561206 CCDC102BQ68D86 513 aa8.47□□□□□ -1.05
USP8-216ENST00000561206 GAS2L2Q8NHY3 880 aa8.47□□□□□ -1.05
USP8-216ENST00000561206 C8AP07357 584 aa8.46□□□□□ -1.06
USP8-216ENST00000561206 RTN1Q16799 776 aa8.46□□□□□ -1.06
USP8-216ENST00000561206 AGGF1Q8N302 714 aaeCLIP8.46□□□□□ -1.06
USP8-216ENST00000561206 IFT43Q96FT9 208 aa8.46□□□□□ -1.06
USP8-216ENST00000561206 USP17L5A8MUK1 530 aa8.45□□□□□ -1.06
USP8-216ENST00000561206 ABL2P42684 1182 aa8.45□□□□□ -1.06
USP8-216ENST00000561206 ATP1A2P50993 1020 aa8.45□□□□□ -1.06
USP8-216ENST00000561206 ALG2Q9H553 416 aa8.45□□□□□ -1.06
USP8-216ENST00000561206 C7orf69Q9H7B7 122 aa8.45□□□□□ -1.06
USP8-216ENST00000561206 ARID4AP29374 1257 aaPredicted RBP8.44□□□□□ -1.06
USP8-216ENST00000561206 MLLT1Q03111 559 aaPredicted RBP8.44□□□□□ -1.06
USP8-216ENST00000561206 KRTAP4-5Q9BYR2 181 aa8.44□□□□□ -1.06
USP8-216ENST00000561206 CEP41Q9BYV8 373 aa8.44□□□□□ -1.06
USP8-216ENST00000561206 TARSP26639 723 aaKnown RBP8.43□□□□□ -1.06
USP8-216ENST00000561206 CLDN10P78369 228 aa8.43□□□□□ -1.06
USP8-216ENST00000561206 CBLL1Q75N03 491 aa8.43□□□□□ -1.06
USP8-216ENST00000561206 PLEKHM2Q8IWE5 1019 aa8.43□□□□□ -1.06
USP8-216ENST00000561206 CACTIN-AS1Q8N1I8 211 aa8.43□□□□□ -1.06
USP8-216ENST00000561206 FAM46AQ96IP4 442 aaKnown RBP8.43□□□□□ -1.06
USP8-216ENST00000561206 HOXD8P13378 290 aaPredicted RBP8.42□□□□□ -1.06
USP8-216ENST00000561206 TRIM42Q8IWZ5 723 aa8.42□□□□□ -1.06
USP8-216ENST00000561206 ABI1Q8IZP0 508 aa8.42□□□□□ -1.06
USP8-216ENST00000561206 LARGE2Q8N3Y3 721 aa8.42□□□□□ -1.06
USP8-216ENST00000561206 PLD4Q96BZ4 506 aa8.42□□□□□ -1.06
USP8-216ENST00000561206 ATAD2Q6PL18 1390 aa8.42□□□□□ -1.06
USP8-216ENST00000561206 RARAP10276 462 aa8.41□□□□□ -1.06
USP8-216ENST00000561206 EIF2AK2P19525 551 aaKnown RBP8.41□□□□□ -1.06
USP8-216ENST00000561206 NEUROD2Q15784 382 aa8.41□□□□□ -1.06
USP8-216ENST00000561206 SIX5Q8N196 739 aa8.41□□□□□ -1.06
USP8-216ENST00000561206 DEPDC4Q8N2C3 294 aa8.41□□□□□ -1.06
USP8-216ENST00000561206 IL22RA1Q8N6P7 574 aa8.41□□□□□ -1.06
USP8-216ENST00000561206 MUC3BQ9H195 1237 aa8.41□□□□□ -1.06
USP8-216ENST00000561206 TLR7Q9NYK1 1049 aaKnown RBP8.41□□□□□ -1.06
USP8-216ENST00000561206 DKK1O94907 266 aa8.4□□□□□ -1.06
USP8-216ENST00000561206 TSEN2Q8NCE0 465 aaKnown RBP8.4□□□□□ -1.06
USP8-216ENST00000561206 MYRFLQ96LU7 910 aa8.4□□□□□ -1.06
USP8-216ENST00000561206 HMX2A2RU54 273 aa8.39□□□□□ -1.07
USP8-216ENST00000561206 SLC24A1O60721 1099 aa8.39□□□□□ -1.07
USP8-216ENST00000561206 EGFRP00533 1210 aa8.39□□□□□ -1.07
USP8-216ENST00000561206 IDH3AP50213 366 aa8.39□□□□□ -1.07
USP8-216ENST00000561206 HFE2Q6ZVN8 426 aa8.39□□□□□ -1.07
USP8-216ENST00000561206 ASIC4Q96FT7 647 aa8.39□□□□□ -1.07
USP8-216ENST00000561206 PALM3A6NDB9 673 aaPredicted RBP8.38□□□□□ -1.07
USP8-216ENST00000561206 TM4SF5O14894 197 aa8.38□□□□□ -1.07
USP8-216ENST00000561206 SASH3O75995 380 aa8.38□□□□□ -1.07
USP8-216ENST00000561206 ITGB5P18084 799 aa8.38□□□□□ -1.07
USP8-216ENST00000561206 KRT25Q7Z3Z0 450 aa8.38□□□□□ -1.07
USP8-216ENST00000561206 CLEC10AQ8IUN9 316 aa8.38□□□□□ -1.07
USP8-216ENST00000561206 UTP4Q969X6 686 aaKnown RBP8.38□□□□□ -1.07
USP8-216ENST00000561206 LOC102724428A0A0B4J2F2 783 aa8.37□□□□□ -1.07
USP8-216ENST00000561206 ARSDP51689 593 aa8.37□□□□□ -1.07
USP8-216ENST00000561206 SIK1P57059 783 aa8.37□□□□□ -1.07
USP8-216ENST00000561206 GDF6Q6KF10 455 aaPredicted RBP8.37□□□□□ -1.07
USP8-216ENST00000561206 GALNT11Q8NCW6 608 aa8.37□□□□□ -1.07
USP8-216ENST00000561206 SHKBP1Q8TBC3 707 aa8.37□□□□□ -1.07
USP8-216ENST00000561206 FAM83CQ9BQN1 747 aa8.37□□□□□ -1.07
USP8-216ENST00000561206 WISP1O95388 367 aa8.36□□□□□ -1.07
USP8-216ENST00000561206 SOX18P35713 384 aa8.36□□□□□ -1.07
USP8-216ENST00000561206 FAM20CQ8IXL6 584 aa8.36□□□□□ -1.07
USP8-216ENST00000561206 NGLY1Q96IV0 654 aa8.36□□□□□ -1.07
USP8-216ENST00000561206 OGFOD1Q8N543 542 aa8.35□□□□□ -1.07
USP8-216ENST00000561206 SCG3Q8WXD2 468 aaKnown RBP8.35□□□□□ -1.07
USP8-216ENST00000561206 USP17L3A6NCW0 530 aa8.34□□□□□ -1.07
USP8-216ENST00000561206 USP17L4A6NCW7 530 aa8.34□□□□□ -1.07
USP8-216ENST00000561206 PRNPP04156 253 aa8.34□□□□□ -1.07
USP8-216ENST00000561206 JUNBP17275 347 aaPredicted RBP8.34□□□□□ -1.07
USP8-216ENST00000561206 USP17L2Q6R6M4 530 aa8.34□□□□□ -1.07
USP8-216ENST00000561206 KIAA1211Q6ZU35 1233 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms