RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 AOC3Q16853 763 aa16.29■□□□□ 0.2
CHRNA3-208ENST00000561128 KSR2Q6VAB6 950 aa16.29■□□□□ 0.2
CHRNA3-208ENST00000561128 CCDC85AQ96PX6 553 aaPredicted RBP16.29■□□□□ 0.2
CHRNA3-208ENST00000561128 STK31Q9BXU1 1019 aa16.29■□□□□ 0.2
CHRNA3-208ENST00000561128 PCCAP05165 728 aaPredicted RBP16.28■□□□□ 0.2
CHRNA3-208ENST00000561128 DDX46Q7L014 1031 aaKnown RBP16.28■□□□□ 0.2
CHRNA3-208ENST00000561128 CCDC191Q8NCU4 936 aa16.28■□□□□ 0.2
CHRNA3-208ENST00000561128 GPR101Q96P66 508 aaPredicted RBP16.28■□□□□ 0.2
CHRNA3-208ENST00000561128 CWC25Q9NXE8 425 aaPredicted RBP16.28■□□□□ 0.2
CHRNA3-208ENST00000561128 MYH3P11055 1940 aa16.27■□□□□ 0.2
CHRNA3-208ENST00000561128 NEURL1BA8MQ27 555 aa16.27■□□□□ 0.2
CHRNA3-208ENST00000561128 F6X3S4 739 aa16.27■□□□□ 0.2
CHRNA3-208ENST00000561128 VEGFAP15692 232 aaPredicted RBP16.27■□□□□ 0.2
CHRNA3-208ENST00000561128 CC2D2BQ6DHV5 1058 aa16.27■□□□□ 0.2
CHRNA3-208ENST00000561128 SCN4AP35499 1836 aa16.26■□□□□ 0.19
CHRNA3-208ENST00000561128 DDX58O95786 925 aaKnown RBP16.26■□□□□ 0.19
CHRNA3-208ENST00000561128 SP8Q8IXZ3 490 aa16.26■□□□□ 0.19
CHRNA3-208ENST00000561128 C16orf71Q8IYS4 520 aaPredicted RBP16.26■□□□□ 0.19
CHRNA3-208ENST00000561128 L3MBTL3Q96JM7 780 aaPredicted RBP16.26■□□□□ 0.19
CHRNA3-208ENST00000561128 RTFDC1Q9BY42 306 aaPredicted RBP16.26■□□□□ 0.19
CHRNA3-208ENST00000561128 PPIP5K2O43314 1243 aa16.25■□□□□ 0.19
CHRNA3-208ENST00000561128 CASP7P55210 303 aa16.25■□□□□ 0.19
CHRNA3-208ENST00000561128 GPSM2P81274 684 aa16.25■□□□□ 0.19
CHRNA3-208ENST00000561128 DPY19L2Q6NUT2 758 aa16.25■□□□□ 0.19
CHRNA3-208ENST00000561128 LARGE2Q8N3Y3 721 aa16.25■□□□□ 0.19
CHRNA3-208ENST00000561128 CDCA7LQ96GN5 454 aa16.25■□□□□ 0.19
CHRNA3-208ENST00000561128 CDHR2Q9BYE9 1310 aa16.24■□□□□ 0.19
CHRNA3-208ENST00000561128 CACNA1FO60840 1977 aa16.24■□□□□ 0.19
CHRNA3-208ENST00000561128 BBOX1O75936 387 aa16.24■□□□□ 0.19
CHRNA3-208ENST00000561128 FKBP5Q13451 457 aaPredicted RBP16.24■□□□□ 0.19
CHRNA3-208ENST00000561128 UBE3BQ7Z3V4 1068 aa16.24■□□□□ 0.19
CHRNA3-208ENST00000561128 TAF1DQ9H5J8 278 aaPredicted RBP16.24■□□□□ 0.19
CHRNA3-208ENST00000561128 MYH16Q9H6N6 1097 aa16.24■□□□□ 0.19
CHRNA3-208ENST00000561128 WTIPA6NIX2 430 aaPredicted RBP16.23■□□□□ 0.19
CHRNA3-208ENST00000561128 YDJCA8MPS7 323 aa16.23■□□□□ 0.19
CHRNA3-208ENST00000561128 PDE8AO60658 829 aa16.23■□□□□ 0.19
CHRNA3-208ENST00000561128 CTSWP56202 376 aa16.23■□□□□ 0.19
CHRNA3-208ENST00000561128 FSTL1Q12841 308 aa16.23■□□□□ 0.19
CHRNA3-208ENST00000561128 DPP8Q6V1X1 898 aaPredicted RBP16.23■□□□□ 0.19
CHRNA3-208ENST00000561128 MPNDQ8N594 471 aa16.23■□□□□ 0.19
CHRNA3-208ENST00000561128 DNAAF4Q8WXU2 420 aa16.23■□□□□ 0.19
CHRNA3-208ENST00000561128 A0A1B0GUL6 1792 aa16.23■□□□□ 0.19
CHRNA3-208ENST00000561128 SCN9AQ15858 1988 aa16.22■□□□□ 0.19
CHRNA3-208ENST00000561128 CEP350Q5VT06 3117 aa16.22■□□□□ 0.19
CHRNA3-208ENST00000561128 H7C1W4 665 aa16.22■□□□□ 0.19
CHRNA3-208ENST00000561128 SCNN1DP51172 638 aa16.22■□□□□ 0.19
CHRNA3-208ENST00000561128 GCKRQ14397 625 aa16.22■□□□□ 0.19
CHRNA3-208ENST00000561128 SMC1BQ8NDV3 1235 aa16.22■□□□□ 0.19
CHRNA3-208ENST00000561128 POLLQ9UGP5 575 aa16.22■□□□□ 0.19
CHRNA3-208ENST00000561128 GJA3Q9Y6H8 435 aa16.22■□□□□ 0.19
CHRNA3-208ENST00000561128 ZNF646O15015 1829 aaPredicted RBP16.22■□□□□ 0.19
CHRNA3-208ENST00000561128 SHTN1A0MZ66 631 aa16.21■□□□□ 0.19
CHRNA3-208ENST00000561128 CCER2I3L3R5 266 aa16.21■□□□□ 0.19
CHRNA3-208ENST00000561128 SLFN5Q08AF3 891 aa16.21■□□□□ 0.19
CHRNA3-208ENST00000561128 KIAA2012Q0VF49 1180 aa16.21■□□□□ 0.19
CHRNA3-208ENST00000561128 NIM1KQ8IY84 436 aa16.21■□□□□ 0.19
CHRNA3-208ENST00000561128 GREM2Q9H772 168 aa16.21■□□□□ 0.19
CHRNA3-208ENST00000561128 RPS8P62241 208 aaKnown RBP16.2■□□□□ 0.18
CHRNA3-208ENST00000561128 CXCL9Q07325 125 aa16.2■□□□□ 0.18
CHRNA3-208ENST00000561128 BEND3Q5T5X7 828 aa16.2■□□□□ 0.18
CHRNA3-208ENST00000561128 GPC2Q8N158 579 aa16.2■□□□□ 0.18
CHRNA3-208ENST00000561128 DNAJC5GQ8N7S2 189 aa16.2■□□□□ 0.18
CHRNA3-208ENST00000561128 TTLL11Q8NHH1 800 aa16.2■□□□□ 0.18
CHRNA3-208ENST00000561128 JDP2Q8WYK2 163 aa16.2■□□□□ 0.18
CHRNA3-208ENST00000561128 EPHX2P34913 555 aa16.19■□□□□ 0.18
CHRNA3-208ENST00000561128 EPS15P42566 896 aa16.19■□□□□ 0.18
CHRNA3-208ENST00000561128 APLP1P51693 650 aa16.19■□□□□ 0.18
CHRNA3-208ENST00000561128 NEXNQ0ZGT2 675 aa16.19■□□□□ 0.18
CHRNA3-208ENST00000561128 FAM161AQ3B820 660 aa16.19■□□□□ 0.18
CHRNA3-208ENST00000561128 CCDC152Q4G0S7 254 aa16.19■□□□□ 0.18
CHRNA3-208ENST00000561128 MIER1Q8N108 512 aa16.19■□□□□ 0.18
CHRNA3-208ENST00000561128 LINS1Q8NG48 757 aa16.19■□□□□ 0.18
CHRNA3-208ENST00000561128 BCL2L13Q9BXK5 485 aa16.19■□□□□ 0.18
CHRNA3-208ENST00000561128 KCNQ5Q9NR82 932 aa16.19■□□□□ 0.18
CHRNA3-208ENST00000561128 NSFL1CQ9UNZ2 370 aaKnown RBP16.19■□□□□ 0.18
CHRNA3-208ENST00000561128 RTL9Q8NET4 1388 aa16.18■□□□□ 0.18
CHRNA3-208ENST00000561128 RAD17O75943 681 aa16.18■□□□□ 0.18
CHRNA3-208ENST00000561128 EIF6P56537 245 aaKnown RBP16.18■□□□□ 0.18
CHRNA3-208ENST00000561128 GRIPAP1Q4V328 841 aa16.18■□□□□ 0.18
CHRNA3-208ENST00000561128 EAPPQ56P03 285 aaPredicted RBP16.18■□□□□ 0.18
CHRNA3-208ENST00000561128 EPHA10Q5JZY3 1008 aa16.18■□□□□ 0.18
CHRNA3-208ENST00000561128 MRPL50Q8N5N7 158 aaKnown RBP16.18■□□□□ 0.18
CHRNA3-208ENST00000561128 TBC1D16Q8TBP0 767 aa16.18■□□□□ 0.18
CHRNA3-208ENST00000561128 CHMP4AQ9BY43 222 aa16.18■□□□□ 0.18
CHRNA3-208ENST00000561128 DBNDD1Q9H9R9 158 aa16.18■□□□□ 0.18
CHRNA3-208ENST00000561128 HACL1Q9UJ83 578 aa16.18■□□□□ 0.18
CHRNA3-208ENST00000561128 RIMBP2O15034 1052 aa16.17■□□□□ 0.18
CHRNA3-208ENST00000561128 FMR1Q06787 632 aaKnown RBP eCLIP16.17■□□□□ 0.18
CHRNA3-208ENST00000561128 CHADLQ6NUI6 762 aa16.17■□□□□ 0.18
CHRNA3-208ENST00000561128 TMC4Q7Z404 712 aa16.17■□□□□ 0.18
CHRNA3-208ENST00000561128 SUPT20HQ8NEM7 779 aa16.17■□□□□ 0.18
CHRNA3-208ENST00000561128 ZNRF3Q9ULT6 936 aa16.17■□□□□ 0.18
CHRNA3-208ENST00000561128 IQCA1LA6NCM1 817 aa16.16■□□□□ 0.18
CHRNA3-208ENST00000561128 E9PSI1 815 aa16.16■□□□□ 0.18
CHRNA3-208ENST00000561128 DOK7Q18PE1 504 aa16.16■□□□□ 0.18
CHRNA3-208ENST00000561128 TRMT2AQ8IZ69 625 aaKnown RBP16.16■□□□□ 0.18
CHRNA3-208ENST00000561128 SSH1Q8WYL5 1049 aa16.16■□□□□ 0.18
CHRNA3-208ENST00000561128 PLA2G12BQ9BX93 195 aa16.16■□□□□ 0.18
CHRNA3-208ENST00000561128 PSME4Q14997 1843 aa16.16■□□□□ 0.18
CHRNA3-208ENST00000561128 C6orf229H3BNL8 230 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms