RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 C4BP0C0L5 1744 aa20.91■□□□□ 0.94
HDDC3-206ENST00000561036 MYH3P11055 1940 aa20.91■□□□□ 0.94
HDDC3-206ENST00000561036 REC8O95072 547 aa20.9■□□□□ 0.94
HDDC3-206ENST00000561036 SYNE4Q8N205 404 aa20.9■□□□□ 0.94
HDDC3-206ENST00000561036 RTL9Q8NET4 1388 aa20.89■□□□□ 0.93
HDDC3-206ENST00000561036 ANKRD18BA2A2Z9 1011 aa20.89■□□□□ 0.93
HDDC3-206ENST00000561036 NTSR2O95665 410 aa20.89■□□□□ 0.93
HDDC3-206ENST00000561036 ADRA2BP18089 450 aa20.89■□□□□ 0.93
HDDC3-206ENST00000561036 RXRBP28702 533 aa20.89■□□□□ 0.93
HDDC3-206ENST00000561036 TAF7LQ5H9L4 462 aa20.89■□□□□ 0.93
HDDC3-206ENST00000561036 RILPL2Q969X0 211 aa20.89■□□□□ 0.93
HDDC3-206ENST00000561036 CCDC8Q9H0W5 538 aaPredicted RBP20.89■□□□□ 0.93
HDDC3-206ENST00000561036 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.89■□□□□ 0.93
HDDC3-206ENST00000561036 LAMB2P55268 1798 aa20.88■□□□□ 0.93
HDDC3-206ENST00000561036 ZPR1O75312 459 aa20.88■□□□□ 0.93
HDDC3-206ENST00000561036 CHMLP26374 656 aa20.88■□□□□ 0.93
HDDC3-206ENST00000561036 ZNF594Q96JF6 807 aaPredicted RBP20.88■□□□□ 0.93
HDDC3-206ENST00000561036 CEP126Q9P2H0 1117 aa20.88■□□□□ 0.93
HDDC3-206ENST00000561036 ATP5JP18859 108 aa20.87■□□□□ 0.93
HDDC3-206ENST00000561036 ITGA6P23229 1130 aa20.87■□□□□ 0.93
HDDC3-206ENST00000561036 EVI5LQ96CN4 794 aa20.87■□□□□ 0.93
HDDC3-206ENST00000561036 GREM2Q9H772 168 aa20.87■□□□□ 0.93
HDDC3-206ENST00000561036 BCL2L12Q9HB09 334 aa20.87■□□□□ 0.93
HDDC3-206ENST00000561036 AKAP2Q9Y2D5 859 aa20.87■□□□□ 0.93
HDDC3-206ENST00000561036 EPB41L2O43491 1005 aaKnown RBP20.86■□□□□ 0.93
HDDC3-206ENST00000561036 TRIM37O94972 964 aa20.86■□□□□ 0.93
HDDC3-206ENST00000561036 LRRC24Q50LG9 513 aa20.86■□□□□ 0.93
HDDC3-206ENST00000561036 TRAPPC3LQ5T215 181 aa20.86■□□□□ 0.93
HDDC3-206ENST00000561036 FBXO41Q8TF61 875 aa20.86■□□□□ 0.93
HDDC3-206ENST00000561036 ESYT1Q9BSJ8 1104 aa20.86■□□□□ 0.93
HDDC3-206ENST00000561036 NYXQ9GZU5 481 aa20.86■□□□□ 0.93
HDDC3-206ENST00000561036 DBNLQ9UJU6 430 aaKnown RBP20.86■□□□□ 0.93
HDDC3-206ENST00000561036 MSH5O43196 834 aa20.85■□□□□ 0.93
HDDC3-206ENST00000561036 CCDC152Q4G0S7 254 aa20.85■□□□□ 0.93
HDDC3-206ENST00000561036 ARHGEF1Q92888 912 aaKnown RBP20.85■□□□□ 0.93
HDDC3-206ENST00000561036 USP26Q9BXU7 913 aa20.85■□□□□ 0.93
HDDC3-206ENST00000561036 LRRC4BQ9NT99 713 aa20.85■□□□□ 0.93
HDDC3-206ENST00000561036 TLR7Q9NYK1 1049 aaKnown RBP20.85■□□□□ 0.93
HDDC3-206ENST00000561036 ZNF609O15014 1411 aa20.85■□□□□ 0.93
HDDC3-206ENST00000561036 BECN1Q14457 450 aa20.84■□□□□ 0.93
HDDC3-206ENST00000561036 SLC10A5Q5PT55 438 aa20.84■□□□□ 0.93
HDDC3-206ENST00000561036 USPL1Q5W0Q7 1092 aa20.84■□□□□ 0.93
HDDC3-206ENST00000561036 TICAM2Q86XR7 235 aa20.84■□□□□ 0.93
HDDC3-206ENST00000561036 PUS3Q9BZE2 481 aaKnown RBP20.84■□□□□ 0.93
HDDC3-206ENST00000561036 RIPOR2Q9Y4F9 1068 aa20.84■□□□□ 0.93
HDDC3-206ENST00000561036 AK9Q5TCS8 1911 aa20.84■□□□□ 0.93
HDDC3-206ENST00000561036 DDX60Q8IY21 1712 aaKnown RBP20.84■□□□□ 0.93
HDDC3-206ENST00000561036 LRP5O75197 1615 aa20.83■□□□□ 0.93
HDDC3-206ENST00000561036 HIP1O00291 1037 aa20.83■□□□□ 0.93
HDDC3-206ENST00000561036 PLSCR1O15162 318 aa20.83■□□□□ 0.93
HDDC3-206ENST00000561036 HCLS1P14317 486 aaPredicted RBP20.83■□□□□ 0.93
HDDC3-206ENST00000561036 RFC4P35249 363 aa20.83■□□□□ 0.93
HDDC3-206ENST00000561036 LDHAL6AQ6ZMR3 332 aa20.83■□□□□ 0.93
HDDC3-206ENST00000561036 SETDB2Q96T68 719 aa20.83■□□□□ 0.93
HDDC3-206ENST00000561036 DAXXQ9UER7 740 aaPredicted RBP20.83■□□□□ 0.93
HDDC3-206ENST00000561036 COL24A1Q17RW2 1714 aa20.83■□□□□ 0.92
HDDC3-206ENST00000561036 TBC1D9BQ66K14 1250 aa20.82■□□□□ 0.92
HDDC3-206ENST00000561036 FAM177BA6PVY3 158 aa20.81■□□□□ 0.92
HDDC3-206ENST00000561036 MAP4K4O95819 1239 aaPredicted RBP20.81■□□□□ 0.92
HDDC3-206ENST00000561036 SSFA2P28290 1259 aa20.81■□□□□ 0.92
HDDC3-206ENST00000561036 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.81■□□□□ 0.92
HDDC3-206ENST00000561036 RUFY2Q8WXA3 655 aa20.81■□□□□ 0.92
HDDC3-206ENST00000561036 CCDC85AQ96PX6 553 aaPredicted RBP20.81■□□□□ 0.92
HDDC3-206ENST00000561036 DBNDD2Q9BQY9 259 aa20.81■□□□□ 0.92
HDDC3-206ENST00000561036 SRP68Q9UHB9 627 aaKnown RBP20.81■□□□□ 0.92
HDDC3-206ENST00000561036 C4AP0C0L4 1744 aa20.81■□□□□ 0.92
HDDC3-206ENST00000561036 SF3B3Q15393 1217 aaKnown RBP20.8■□□□□ 0.92
HDDC3-206ENST00000561036 HAUS7Q99871 368 aa20.8■□□□□ 0.92
HDDC3-206ENST00000561036 CNNM1Q9NRU3 951 aa20.8■□□□□ 0.92
HDDC3-206ENST00000561036 RFX7Q2KHR2 1363 aa20.8■□□□□ 0.92
HDDC3-206ENST00000561036 MROH5Q6ZUA9 1318 aa20.79■□□□□ 0.92
HDDC3-206ENST00000561036 RIC1Q4ADV7 1423 aa20.79■□□□□ 0.92
HDDC3-206ENST00000561036 A0A1B0GUL7 405 aa20.79■□□□□ 0.92
HDDC3-206ENST00000561036 TXNRD1Q16881 649 aa20.79■□□□□ 0.92
HDDC3-206ENST00000561036 ERFEQ4G0M1 354 aa20.79■□□□□ 0.92
HDDC3-206ENST00000561036 METTL24Q5JXM2 366 aa20.79■□□□□ 0.92
HDDC3-206ENST00000561036 NEUROD6Q96NK8 337 aa20.79■□□□□ 0.92
HDDC3-206ENST00000561036 BOLA2Q9H3K6 86 aa20.79■□□□□ 0.92
HDDC3-206ENST00000561036 UBR3Q6ZT12 1888 aa20.79■□□□□ 0.92
HDDC3-206ENST00000561036 ABCC12Q96J65 1359 aa20.78■□□□□ 0.92
HDDC3-206ENST00000561036 SGSM2O43147 1006 aa20.78■□□□□ 0.92
HDDC3-206ENST00000561036 TIMM10P62072 90 aa20.78■□□□□ 0.92
HDDC3-206ENST00000561036 TPTE2Q6XPS3 522 aa20.78■□□□□ 0.92
HDDC3-206ENST00000561036 AMIGO3Q86WK7 504 aa20.78■□□□□ 0.92
HDDC3-206ENST00000561036 DIAPH3Q9NSV4 1193 aa20.78■□□□□ 0.92
HDDC3-206ENST00000561036 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.77■□□□□ 0.92
HDDC3-206ENST00000561036 GTF2E1P29083 439 aaPredicted RBP20.77■□□□□ 0.92
HDDC3-206ENST00000561036 NBPF5PQ86XG9 351 aaPredicted RBP20.77■□□□□ 0.92
HDDC3-206ENST00000561036 VGLL2Q8N8G2 317 aa20.77■□□□□ 0.92
HDDC3-206ENST00000561036 CDC5LQ99459 802 aaKnown RBP20.77■□□□□ 0.92
HDDC3-206ENST00000561036 RGS17Q9UGC6 210 aaPredicted RBP20.77■□□□□ 0.92
HDDC3-206ENST00000561036 MCCP23508 829 aa20.76■□□□□ 0.91
HDDC3-206ENST00000561036 ATP2B3Q16720 1220 aa20.76■□□□□ 0.91
HDDC3-206ENST00000561036 CCDC158Q5M9N0 1113 aa20.76■□□□□ 0.91
HDDC3-206ENST00000561036 BICDL1Q6ZP65 573 aa20.76■□□□□ 0.91
HDDC3-206ENST00000561036 SMIM5Q71RC9 77 aa20.76■□□□□ 0.91
HDDC3-206ENST00000561036 PROM2Q8N271 834 aa20.76■□□□□ 0.91
HDDC3-206ENST00000561036 SNX21Q969T3 373 aa20.76■□□□□ 0.91
HDDC3-206ENST00000561036 KIF2CQ99661 725 aa20.76■□□□□ 0.91
HDDC3-206ENST00000561036 CARMIL3Q8ND23 1372 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms