RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 PPP1R15AO75807 674 aaPredicted RBP8.81□□□□□ -1
PSMA4-221ENST00000560842 RFX1P22670 979 aa8.81□□□□□ -1
PSMA4-221ENST00000560842 ELOAQ14241 798 aaKnown RBP8.81□□□□□ -1
PSMA4-221ENST00000560842 PCSK7Q16549 785 aa8.81□□□□□ -1
PSMA4-221ENST00000560842 CRTC2Q53ET0 693 aaPredicted RBP8.81□□□□□ -1
PSMA4-221ENST00000560842 STAG2Q8N3U4 1231 aa8.81□□□□□ -1
PSMA4-221ENST00000560842 MEGF10Q96KG7 1140 aa8.81□□□□□ -1
PSMA4-221ENST00000560842 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.8□□□□□ -1
PSMA4-221ENST00000560842 USP17L15C9J2P7 530 aa8.8□□□□□ -1
PSMA4-221ENST00000560842 USP17L10C9JJH3 530 aa8.8□□□□□ -1
PSMA4-221ENST00000560842 USP17L13C9JLJ4 530 aa8.8□□□□□ -1
PSMA4-221ENST00000560842 USP17L12C9JPN9 530 aa8.8□□□□□ -1
PSMA4-221ENST00000560842 USP17L11C9JVI0 530 aa8.8□□□□□ -1
PSMA4-221ENST00000560842 USP17L21D6R901 530 aa8.8□□□□□ -1
PSMA4-221ENST00000560842 USP17L18D6R9N7 530 aa8.8□□□□□ -1
PSMA4-221ENST00000560842 USP17L22D6RA61 530 aa8.8□□□□□ -1
PSMA4-221ENST00000560842 USP17L17D6RBQ6 530 aa8.8□□□□□ -1
PSMA4-221ENST00000560842 USP17L19D6RCP7 530 aa8.8□□□□□ -1
PSMA4-221ENST00000560842 USP17L20D6RJB6 530 aa8.8□□□□□ -1
PSMA4-221ENST00000560842 PAX4O43316 350 aa8.8□□□□□ -1
PSMA4-221ENST00000560842 ATG7O95352 703 aa8.8□□□□□ -1
PSMA4-221ENST00000560842 NFKB1P19838 968 aa8.8□□□□□ -1
PSMA4-221ENST00000560842 RASA1P20936 1047 aa8.8□□□□□ -1
PSMA4-221ENST00000560842 USP17L24Q0WX57 530 aa8.8□□□□□ -1
PSMA4-221ENST00000560842 IER5Q5VY09 327 aa8.8□□□□□ -1
PSMA4-221ENST00000560842 FAM35AQ86V20 835 aa8.8□□□□□ -1
PSMA4-221ENST00000560842 ARXQ96QS3 562 aa8.8□□□□□ -1
PSMA4-221ENST00000560842 LPIN3Q9BQK8 851 aa8.8□□□□□ -1
PSMA4-221ENST00000560842 LARP1Q6PKG0 1096 aaKnown RBP8.79□□□□□ -1
PSMA4-221ENST00000560842 TTC9Q92623 222 aa8.79□□□□□ -1
PSMA4-221ENST00000560842 C2orf49Q9BVC5 232 aaPredicted RBP8.79□□□□□ -1
PSMA4-221ENST00000560842 PCMTD2Q9NV79 361 aa8.79□□□□□ -1
PSMA4-221ENST00000560842 ATAD2Q6PL18 1390 aa8.78□□□□□ -1
PSMA4-221ENST00000560842 CPB1P15086 417 aa8.78□□□□□ -1
PSMA4-221ENST00000560842 TSEN2Q8NCE0 465 aaKnown RBP8.78□□□□□ -1
PSMA4-221ENST00000560842 MAP3K6O95382 1288 aa8.77□□□□□ -1.01
PSMA4-221ENST00000560842 TXKP42681 527 aa8.77□□□□□ -1.01
PSMA4-221ENST00000560842 PERM1Q5SV97 790 aa8.77□□□□□ -1.01
PSMA4-221ENST00000560842 WFDC8Q8IUA0 241 aa8.77□□□□□ -1.01
PSMA4-221ENST00000560842 ANKMY2Q8IV38 441 aa8.77□□□□□ -1.01
PSMA4-221ENST00000560842 DZIP1LQ8IYY4 767 aaKnown RBP8.77□□□□□ -1.01
PSMA4-221ENST00000560842 GAS2L2Q8NHY3 880 aa8.77□□□□□ -1.01
PSMA4-221ENST00000560842 FMNL2Q96PY5 1086 aa8.77□□□□□ -1.01
PSMA4-221ENST00000560842 DMGDHQ9UI17 866 aaKnown RBP8.77□□□□□ -1.01
PSMA4-221ENST00000560842 ZBTB42B2RXF5 422 aa8.76□□□□□ -1.01
PSMA4-221ENST00000560842 PLAURQ03405 335 aa8.76□□□□□ -1.01
PSMA4-221ENST00000560842 TRPM4Q8TD43 1214 aa8.76□□□□□ -1.01
PSMA4-221ENST00000560842 TGFBR3LH3BV60 316 aa8.75□□□□□ -1.01
PSMA4-221ENST00000560842 DLL1O00548 723 aa8.75□□□□□ -1.01
PSMA4-221ENST00000560842 DEAF1O75398 565 aaPredicted RBP8.75□□□□□ -1.01
PSMA4-221ENST00000560842 FSTP19883 344 aa8.75□□□□□ -1.01
PSMA4-221ENST00000560842 SEC13P55735 322 aa8.75□□□□□ -1.01
PSMA4-221ENST00000560842 CDCA8Q53HL2 280 aa8.75□□□□□ -1.01
PSMA4-221ENST00000560842 ELMSAN1Q6PJG2 1045 aa8.75□□□□□ -1.01
PSMA4-221ENST00000560842 ZNF594Q96JF6 807 aaPredicted RBP8.75□□□□□ -1.01
PSMA4-221ENST00000560842 ZMIZ1Q9ULJ6 1067 aa8.75□□□□□ -1.01
PSMA4-221ENST00000560842 GRNP28799 593 aaKnown RBP8.74□□□□□ -1.01
PSMA4-221ENST00000560842 SSTR4P31391 388 aa8.74□□□□□ -1.01
PSMA4-221ENST00000560842 DPYDQ12882 1025 aa8.74□□□□□ -1.01
PSMA4-221ENST00000560842 RTN1Q16799 776 aa8.74□□□□□ -1.01
PSMA4-221ENST00000560842 DHX32Q7L7V1 743 aaKnown RBP8.74□□□□□ -1.01
PSMA4-221ENST00000560842 NGLY1Q96IV0 654 aa8.74□□□□□ -1.01
PSMA4-221ENST00000560842 BCS1LQ9Y276 419 aa8.74□□□□□ -1.01
PSMA4-221ENST00000560842 EPB42P16452 691 aa8.73□□□□□ -1.01
PSMA4-221ENST00000560842 CD97P48960 835 aa8.73□□□□□ -1.01
PSMA4-221ENST00000560842 TMEM130Q8N3G9 435 aa8.73□□□□□ -1.01
PSMA4-221ENST00000560842 SCG3Q8WXD2 468 aaKnown RBP8.73□□□□□ -1.01
PSMA4-221ENST00000560842 AKTIPQ9H8T0 292 aa8.73□□□□□ -1.01
PSMA4-221ENST00000560842 C11orf16Q9NQ32 467 aa8.73□□□□□ -1.01
PSMA4-221ENST00000560842 ZFATQ9P243 1243 aa8.73□□□□□ -1.01
PSMA4-221ENST00000560842 NOVA2Q9UNW9 492 aaKnown RBP8.73□□□□□ -1.01
PSMA4-221ENST00000560842 FAM69CQ0P6D2 419 aa8.72□□□□□ -1.01
PSMA4-221ENST00000560842 YBX3P16989 372 aaKnown RBP eCLIP8.71□□□□□ -1.02
PSMA4-221ENST00000560842 INPP5BP32019 993 aa8.71□□□□□ -1.02
PSMA4-221ENST00000560842 GPLD1P80108 840 aa8.71□□□□□ -1.02
PSMA4-221ENST00000560842 FAM200AQ8TCP9 573 aa8.71□□□□□ -1.02
PSMA4-221ENST00000560842 CHMP7Q8WUX9 453 aaPredicted RBP8.71□□□□□ -1.02
PSMA4-221ENST00000560842 RBM19Q9Y4C8 960 aaKnown RBP8.71□□□□□ -1.02
PSMA4-221ENST00000560842 TARSP26639 723 aaKnown RBP8.7□□□□□ -1.02
PSMA4-221ENST00000560842 IRAK1P51617 712 aa8.7□□□□□ -1.02
PSMA4-221ENST00000560842 SWI5Q1ZZU3 235 aa8.7□□□□□ -1.02
PSMA4-221ENST00000560842 IFT43Q96FT9 208 aa8.7□□□□□ -1.02
PSMA4-221ENST00000560842 ARID3AQ99856 593 aa8.7□□□□□ -1.02
PSMA4-221ENST00000560842 MRPL18Q9H0U6 180 aaKnown RBP8.7□□□□□ -1.02
PSMA4-221ENST00000560842 ACIN1Q9UKV3 1341 aaKnown RBP8.7□□□□□ -1.02
PSMA4-221ENST00000560842 F8W735 103 aaPredicted RBP8.69□□□□□ -1.02
PSMA4-221ENST00000560842 ALX3O95076 343 aa8.69□□□□□ -1.02
PSMA4-221ENST00000560842 KRT25Q7Z3Z0 450 aa8.69□□□□□ -1.02
PSMA4-221ENST00000560842 STK32AQ8WU08 396 aa8.69□□□□□ -1.02
PSMA4-221ENST00000560842 SMG9Q9H0W8 520 aaKnown RBP8.69□□□□□ -1.02
PSMA4-221ENST00000560842 COBLO75128 1261 aa8.68□□□□□ -1.02
PSMA4-221ENST00000560842 IDH3AP50213 366 aa8.68□□□□□ -1.02
PSMA4-221ENST00000560842 MLLT1Q03111 559 aaPredicted RBP8.68□□□□□ -1.02
PSMA4-221ENST00000560842 MED26O95402 600 aa8.67□□□□□ -1.02
PSMA4-221ENST00000560842 RARAP10276 462 aa8.67□□□□□ -1.02
PSMA4-221ENST00000560842 NRLP54845 237 aa8.67□□□□□ -1.02
PSMA4-221ENST00000560842 TMEM164Q5U3C3 297 aa8.67□□□□□ -1.02
PSMA4-221ENST00000560842 TMEM88BA6NKF7 163 aa8.66□□□□□ -1.02
PSMA4-221ENST00000560842 KIAA1324LA8MWY0 1029 aaPredicted RBP8.66□□□□□ -1.02
PSMA4-221ENST00000560842 SASH3O75995 380 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 161.7 ms