RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 BTAF1O14981 1849 aa15.7■□□□□ 0.1
SNX1-211ENST00000560829 NUP98P52948 1817 aa15.7■□□□□ 0.1
SNX1-211ENST00000560829 SH3TC1Q8TE82 1336 aa15.7■□□□□ 0.1
SNX1-211ENST00000560829 SGSM2O43147 1006 aa15.69■□□□□ 0.1
SNX1-211ENST00000560829 RPS6KA4O75676 772 aa15.69■□□□□ 0.1
SNX1-211ENST00000560829 RABEP1Q15276 862 aa15.69■□□□□ 0.1
SNX1-211ENST00000560829 IL17RAQ96F46 866 aa15.69■□□□□ 0.1
SNX1-211ENST00000560829 UTP14AQ9BVJ6 771 aaKnown RBP15.69■□□□□ 0.1
SNX1-211ENST00000560829 BCL11BQ9C0K0 894 aaPredicted RBP15.69■□□□□ 0.1
SNX1-211ENST00000560829 ZNF609O15014 1411 aa15.69■□□□□ 0.1
SNX1-211ENST00000560829 DBNDD2Q9BQY9 259 aa15.69■□□□□ 0.1
SNX1-211ENST00000560829 PUS3Q9BZE2 481 aaKnown RBP15.69■□□□□ 0.1
SNX1-211ENST00000560829 CCNL1Q9UK58 526 aaPredicted RBP15.69■□□□□ 0.1
SNX1-211ENST00000560829 HIP1O00291 1037 aa15.68■□□□□ 0.1
SNX1-211ENST00000560829 NTSR2O95665 410 aa15.68■□□□□ 0.1
SNX1-211ENST00000560829 HSP90B1P14625 803 aaKnown RBP15.68■□□□□ 0.1
SNX1-211ENST00000560829 ITGA6P23229 1130 aa15.68■□□□□ 0.1
SNX1-211ENST00000560829 HSCBQ8IWL3 235 aa15.68■□□□□ 0.1
SNX1-211ENST00000560829 IL25Q9H293 177 aa15.68■□□□□ 0.1
SNX1-211ENST00000560829 GREM2Q9H772 168 aa15.68■□□□□ 0.1
SNX1-211ENST00000560829 CEP126Q9P2H0 1117 aa15.68■□□□□ 0.1
SNX1-211ENST00000560829 BCORQ6W2J9 1755 aa15.67■□□□□ 0.1
SNX1-211ENST00000560829 ANKRD18BA2A2Z9 1011 aa15.67■□□□□ 0.1
SNX1-211ENST00000560829 BOLA2Q9H3K6 86 aa15.67■□□□□ 0.1
SNX1-211ENST00000560829 NIP7Q9Y221 180 aaKnown RBP eCLIP15.67■□□□□ 0.1
SNX1-211ENST00000560829 RFX7Q2KHR2 1363 aa15.67■□□□□ 0.1
SNX1-211ENST00000560829 KCNQ4P56696 695 aa15.67■□□□□ 0.1
SNX1-211ENST00000560829 ANAPC15P60006 121 aa15.67■□□□□ 0.1
SNX1-211ENST00000560829 TAF7LQ5H9L4 462 aa15.67■□□□□ 0.1
SNX1-211ENST00000560829 RUFY2Q8WXA3 655 aa15.67■□□□□ 0.1
SNX1-211ENST00000560829 ANO2Q9NQ90 1003 aa15.67■□□□□ 0.1
SNX1-211ENST00000560829 AKAP2Q9Y2D5 859 aa15.67■□□□□ 0.1
SNX1-211ENST00000560829 MCCP23508 829 aa15.66■□□□□ 0.1
SNX1-211ENST00000560829 TICAM2Q86XR7 235 aa15.66■□□□□ 0.1
SNX1-211ENST00000560829 HAUS7Q99871 368 aa15.66■□□□□ 0.1
SNX1-211ENST00000560829 SNRKQ9NRH2 765 aa15.66■□□□□ 0.1
SNX1-211ENST00000560829 DIAPH3Q9NSV4 1193 aa15.66■□□□□ 0.1
SNX1-211ENST00000560829 NARFQ9UHQ1 456 aa15.66■□□□□ 0.1
SNX1-211ENST00000560829 RIPOR2Q9Y4F9 1068 aa15.66■□□□□ 0.1
SNX1-211ENST00000560829 LRP5O75197 1615 aa15.66■□□□□ 0.1
SNX1-211ENST00000560829 RTL9Q8NET4 1388 aa15.66■□□□□ 0.1
SNX1-211ENST00000560829 LY75O60449 1722 aa15.66■□□□□ 0.1
SNX1-211ENST00000560829 A0A1B0GUL7 405 aa15.65■□□□□ 0.1
SNX1-211ENST00000560829 FAM196AQ6ZSG2 479 aa15.65■□□□□ 0.1
SNX1-211ENST00000560829 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.65■□□□□ 0.1
SNX1-211ENST00000560829 CCDC85AQ96PX6 553 aaPredicted RBP15.65■□□□□ 0.1
SNX1-211ENST00000560829 RAD50Q92878 1312 aa15.65■□□□□ 0.1
SNX1-211ENST00000560829 RIC1Q4ADV7 1423 aa15.65■□□□□ 0.1
SNX1-211ENST00000560829 TIMM10P62072 90 aa15.65■□□□□ 0.1
SNX1-211ENST00000560829 BCL2L12Q9HB09 334 aa15.65■□□□□ 0.1
SNX1-211ENST00000560829 SCN7AQ01118 1682 aa15.64■□□□□ 0.09
SNX1-211ENST00000560829 CWC27Q6UX04 472 aaKnown RBP15.64■□□□□ 0.09
SNX1-211ENST00000560829 LDHAL6AQ6ZMR3 332 aa15.64■□□□□ 0.09
SNX1-211ENST00000560829 KRT27Q7Z3Y8 459 aa15.64■□□□□ 0.09
SNX1-211ENST00000560829 IL27Q8NEV9 243 aa15.64■□□□□ 0.09
SNX1-211ENST00000560829 NEUROD6Q96NK8 337 aa15.64■□□□□ 0.09
SNX1-211ENST00000560829 LSG1Q9H089 658 aaKnown RBP15.64■□□□□ 0.09
SNX1-211ENST00000560829 ANTXR1Q9H6X2 564 aa15.64■□□□□ 0.09
SNX1-211ENST00000560829 SBF2Q86WG5 1849 aa15.64■□□□□ 0.09
SNX1-211ENST00000560829 HSPA4P34932 840 aa15.63■□□□□ 0.09
SNX1-211ENST00000560829 RTCBQ9Y3I0 505 aaKnown RBP15.63■□□□□ 0.09
SNX1-211ENST00000560829 GNPATO15228 680 aa15.63■□□□□ 0.09
SNX1-211ENST00000560829 CD2BP2O95400 341 aaKnown RBP15.63■□□□□ 0.09
SNX1-211ENST00000560829 HCLS1P14317 486 aaPredicted RBP15.63■□□□□ 0.09
SNX1-211ENST00000560829 ZNF772Q68DY9 489 aaPredicted RBP15.63■□□□□ 0.09
SNX1-211ENST00000560829 VGLL2Q8N8G2 317 aa15.63■□□□□ 0.09
SNX1-211ENST00000560829 FSD1Q9BTV5 496 aa15.63■□□□□ 0.09
SNX1-211ENST00000560829 ABCC12Q96J65 1359 aa15.62■□□□□ 0.09
SNX1-211ENST00000560829 K7ELQ4 463 aaPredicted RBP15.62■□□□□ 0.09
SNX1-211ENST00000560829 CCDC152Q4G0S7 254 aa15.62■□□□□ 0.09
SNX1-211ENST00000560829 RBM6P78332 1123 aaKnown RBP15.61■□□□□ 0.09
SNX1-211ENST00000560829 METTL24Q5JXM2 366 aa15.61■□□□□ 0.09
SNX1-211ENST00000560829 USPL1Q5W0Q7 1092 aa15.61■□□□□ 0.09
SNX1-211ENST00000560829 KIAA1211Q6ZU35 1233 aa15.61■□□□□ 0.09
SNX1-211ENST00000560829 CNNM1Q9NRU3 951 aa15.61■□□□□ 0.09
SNX1-211ENST00000560829 FAM177BA6PVY3 158 aa15.61■□□□□ 0.09
SNX1-211ENST00000560829 NMIQ13287 307 aaPredicted RBP15.61■□□□□ 0.09
SNX1-211ENST00000560829 SLC27A3Q5K4L6 730 aa15.61■□□□□ 0.09
SNX1-211ENST00000560829 SLC10A5Q5PT55 438 aa15.61■□□□□ 0.09
SNX1-211ENST00000560829 KBTBD3Q8NAB2 608 aa15.61■□□□□ 0.09
SNX1-211ENST00000560829 XAGE2Q96GT9 111 aa15.61■□□□□ 0.09
SNX1-211ENST00000560829 PALD1Q9ULE6 856 aa15.61■□□□□ 0.09
SNX1-211ENST00000560829 MED23Q9ULK4 1368 aa15.61■□□□□ 0.09
SNX1-211ENST00000560829 AK9Q5TCS8 1911 aa15.6■□□□□ 0.09
SNX1-211ENST00000560829 LAMB2P55268 1798 aa15.6■□□□□ 0.09
SNX1-211ENST00000560829 MROH5Q6ZUA9 1318 aa15.6■□□□□ 0.09
SNX1-211ENST00000560829 ST18O60284 1047 aa15.6■□□□□ 0.09
SNX1-211ENST00000560829 PDE8BO95263 885 aa15.6■□□□□ 0.09
SNX1-211ENST00000560829 ATP2B3Q16720 1220 aa15.6■□□□□ 0.09
SNX1-211ENST00000560829 TBC1D9BQ66K14 1250 aa15.6■□□□□ 0.09
SNX1-211ENST00000560829 ARHGEF1Q92888 912 aaKnown RBP15.6■□□□□ 0.09
SNX1-211ENST00000560829 EDC3Q96F86 508 aaKnown RBP15.6■□□□□ 0.09
SNX1-211ENST00000560829 FAM227BQ96M60 508 aa15.6■□□□□ 0.09
SNX1-211ENST00000560829 LRRC4BQ9NT99 713 aa15.6■□□□□ 0.09
SNX1-211ENST00000560829 C4BP0C0L5 1744 aa15.6■□□□□ 0.09
SNX1-211ENST00000560829 MYH3P11055 1940 aa15.59■□□□□ 0.09
SNX1-211ENST00000560829 ZPR1O75312 459 aa15.59■□□□□ 0.09
SNX1-211ENST00000560829 ADRA2BP18089 450 aa15.59■□□□□ 0.09
SNX1-211ENST00000560829 SF3B3Q15393 1217 aaKnown RBP15.59■□□□□ 0.09
SNX1-211ENST00000560829 CCDC158Q5M9N0 1113 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms