RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 KRT26Q7Z3Y9 468 aa9.19□□□□□ -0.94
HERC1-208ENST00000560462 LARGE2Q8N3Y3 721 aa9.19□□□□□ -0.94
HERC1-208ENST00000560462 CNBD1Q8NA66 436 aa9.19□□□□□ -0.94
HERC1-208ENST00000560462 HTATIP2Q9BUP3 242 aa9.19□□□□□ -0.94
HERC1-208ENST00000560462 CFHR5Q9BXR6 569 aa9.19□□□□□ -0.94
HERC1-208ENST00000560462 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.19□□□□□ -0.94
HERC1-208ENST00000560462 EDC4Q6P2E9 1401 aaKnown RBP9.19□□□□□ -0.94
HERC1-208ENST00000560462 ZBTB7BO15156 539 aaPredicted RBP9.18□□□□□ -0.94
HERC1-208ENST00000560462 TM4SF4P48230 202 aa9.18□□□□□ -0.94
HERC1-208ENST00000560462 PSEN1P49768 467 aa9.18□□□□□ -0.94
HERC1-208ENST00000560462 GMPSP49915 693 aaPredicted RBP9.18□□□□□ -0.94
HERC1-208ENST00000560462 ST5P78524 1137 aa9.18□□□□□ -0.94
HERC1-208ENST00000560462 NEUROD2Q15784 382 aa9.18□□□□□ -0.94
HERC1-208ENST00000560462 R3HDMLQ9H3Y0 253 aa9.18□□□□□ -0.94
HERC1-208ENST00000560462 STAP2Q9UGK3 403 aa9.18□□□□□ -0.94
HERC1-208ENST00000560462 CDHR2Q9BYE9 1310 aa9.17□□□□□ -0.94
HERC1-208ENST00000560462 PITPNM1O00562 1244 aa9.17□□□□□ -0.94
HERC1-208ENST00000560462 NPR1P16066 1061 aa9.17□□□□□ -0.94
HERC1-208ENST00000560462 TBC1D9BQ66K14 1250 aa9.17□□□□□ -0.94
HERC1-208ENST00000560462 SMYD5Q6GMV2 418 aa9.17□□□□□ -0.94
HERC1-208ENST00000560462 HDGFL2Q7Z4V5 671 aaPredicted RBP9.17□□□□□ -0.94
HERC1-208ENST00000560462 NBPF11Q86T75 865 aa9.17□□□□□ -0.94
HERC1-208ENST00000560462 NIM1KQ8IY84 436 aa9.17□□□□□ -0.94
HERC1-208ENST00000560462 TRPM4Q8TD43 1214 aa9.17□□□□□ -0.94
HERC1-208ENST00000560462 COG3Q96JB2 828 aa9.17□□□□□ -0.94
HERC1-208ENST00000560462 MRC1P22897 1456 aa9.16□□□□□ -0.94
HERC1-208ENST00000560462 A0A1W2PP64 1363 aa9.16□□□□□ -0.94
HERC1-208ENST00000560462 LOC105371045A0A1W2PR82 267 aa9.16□□□□□ -0.94
HERC1-208ENST00000560462 RRS1Q15050 365 aaKnown RBP9.16□□□□□ -0.94
HERC1-208ENST00000560462 LRIT3Q3SXY7 679 aa9.16□□□□□ -0.94
HERC1-208ENST00000560462 TSPYL2Q9H2G4 693 aaPredicted RBP9.16□□□□□ -0.94
HERC1-208ENST00000560462 PCDHB8Q9UN66 801 aa9.16□□□□□ -0.94
HERC1-208ENST00000560462 PCDHB13Q9Y5F0 798 aa9.16□□□□□ -0.94
HERC1-208ENST00000560462 TJP1Q07157 1748 aa9.16□□□□□ -0.94
HERC1-208ENST00000560462 WASHC2AQ641Q2 1341 aa9.15□□□□□ -0.94
HERC1-208ENST00000560462 ADM5C9JUS6 153 aa9.15□□□□□ -0.94
HERC1-208ENST00000560462 SEMA3EO15041 775 aa9.15□□□□□ -0.94
HERC1-208ENST00000560462 ZMYND10O75800 440 aa9.15□□□□□ -0.94
HERC1-208ENST00000560462 CABP4P57796 275 aa9.15□□□□□ -0.94
HERC1-208ENST00000560462 SREBF2Q12772 1141 aa9.15□□□□□ -0.94
HERC1-208ENST00000560462 SLC9C1Q4G0N8 1177 aa9.15□□□□□ -0.94
HERC1-208ENST00000560462 HSP90AB2PQ58FF8 381 aa9.15□□□□□ -0.94
HERC1-208ENST00000560462 ALYREFQ86V81 257 aaKnown RBP9.15□□□□□ -0.94
HERC1-208ENST00000560462 FBXO22Q8NEZ5 403 aa9.15□□□□□ -0.94
HERC1-208ENST00000560462 ERO1AQ96HE7 468 aa9.15□□□□□ -0.94
HERC1-208ENST00000560462 SLC24A3Q9HC58 644 aa9.15□□□□□ -0.94
HERC1-208ENST00000560462 HCN4Q9Y3Q4 1203 aa9.15□□□□□ -0.94
HERC1-208ENST00000560462 ANKRD26Q9UPS8 1709 aa9.14□□□□□ -0.95
HERC1-208ENST00000560462 TONSLQ96HA7 1378 aa9.14□□□□□ -0.95
HERC1-208ENST00000560462 NPC1L1Q9UHC9 1359 aa9.14□□□□□ -0.95
HERC1-208ENST00000560462 MYCP01106 439 aaPredicted RBP9.14□□□□□ -0.95
HERC1-208ENST00000560462 DNAJC10Q8IXB1 793 aa9.14□□□□□ -0.95
HERC1-208ENST00000560462 GUCD1Q96NT3 240 aa9.14□□□□□ -0.95
HERC1-208ENST00000560462 BCL2L13Q9BXK5 485 aa9.14□□□□□ -0.95
HERC1-208ENST00000560462 EFCC1Q9HA90 598 aa9.14□□□□□ -0.95
HERC1-208ENST00000560462 ZNF609O15014 1411 aa9.14□□□□□ -0.95
HERC1-208ENST00000560462 SNED1Q8TER0 1413 aa9.14□□□□□ -0.95
HERC1-208ENST00000560462 IRS2Q9Y4H2 1338 aa9.13□□□□□ -0.95
HERC1-208ENST00000560462 PPP1R37O75864 691 aa9.13□□□□□ -0.95
HERC1-208ENST00000560462 BCAMP50895 628 aa9.13□□□□□ -0.95
HERC1-208ENST00000560462 CXCL9Q07325 125 aa9.13□□□□□ -0.95
HERC1-208ENST00000560462 SAMD7Q7Z3H4 446 aa9.13□□□□□ -0.95
HERC1-208ENST00000560462 DCPSQ96C86 337 aaKnown RBP9.13□□□□□ -0.95
HERC1-208ENST00000560462 P2RX7Q99572 595 aaKnown RBP9.13□□□□□ -0.95
HERC1-208ENST00000560462 ZBTB1Q9Y2K1 713 aa9.13□□□□□ -0.95
HERC1-208ENST00000560462 H7C1D1 291 aa9.12□□□□□ -0.95
HERC1-208ENST00000560462 ALDH1A1P00352 501 aa9.12□□□□□ -0.95
HERC1-208ENST00000560462 HSP90AB1P08238 724 aaKnown RBP9.12□□□□□ -0.95
HERC1-208ENST00000560462 CYP19A1P11511 503 aaPredicted RBP9.12□□□□□ -0.95
HERC1-208ENST00000560462 ALDH1B1P30837 517 aa9.12□□□□□ -0.95
HERC1-208ENST00000560462 BMP8BP34820 402 aa9.12□□□□□ -0.95
HERC1-208ENST00000560462 FKBP1BP68106 108 aa9.12□□□□□ -0.95
HERC1-208ENST00000560462 TJAP1Q5JTD0 557 aa9.12□□□□□ -0.95
HERC1-208ENST00000560462 MAFAQ8NHW3 353 aaPredicted RBP9.12□□□□□ -0.95
HERC1-208ENST00000560462 CD99L2Q8TCZ2 262 aa9.12□□□□□ -0.95
HERC1-208ENST00000560462 TMC1Q8TDI8 760 aa9.12□□□□□ -0.95
HERC1-208ENST00000560462 SETDB2Q96T68 719 aa9.12□□□□□ -0.95
HERC1-208ENST00000560462 EVI5O60447 810 aa9.11□□□□□ -0.95
HERC1-208ENST00000560462 CC2D2BQ6DHV5 1058 aa9.11□□□□□ -0.95
HERC1-208ENST00000560462 SHISA4Q96DD7 197 aa9.11□□□□□ -0.95
HERC1-208ENST00000560462 TERF2IPQ9NYB0 399 aa9.11□□□□□ -0.95
HERC1-208ENST00000560462 CNOT7Q9UIV1 285 aaKnown RBP9.11□□□□□ -0.95
HERC1-208ENST00000560462 FARP1Q9Y4F1 1045 aaPredicted RBP9.11□□□□□ -0.95
HERC1-208ENST00000560462 NCAPD2Q15021 1401 aa9.11□□□□□ -0.95
HERC1-208ENST00000560462 A0A087WZG4 1122 aa9.1□□□□□ -0.95
HERC1-208ENST00000560462 PPIP5K2O43314 1243 aa9.1□□□□□ -0.95
HERC1-208ENST00000560462 MKRN3Q13064 507 aaKnown RBP9.1□□□□□ -0.95
HERC1-208ENST00000560462 GRIPAP1Q4V328 841 aa9.1□□□□□ -0.95
HERC1-208ENST00000560462 SULF1Q8IWU6 871 aa9.1□□□□□ -0.95
HERC1-208ENST00000560462 MICALL2Q8IY33 904 aa9.1□□□□□ -0.95
HERC1-208ENST00000560462 CDCA5Q96FF9 252 aa9.1□□□□□ -0.95
HERC1-208ENST00000560462 GDF15Q99988 308 aa9.1□□□□□ -0.95
HERC1-208ENST00000560462 ZNRF3Q9ULT6 936 aa9.1□□□□□ -0.95
HERC1-208ENST00000560462 FLT4P35916 1363 aa9.1□□□□□ -0.95
HERC1-208ENST00000560462 SHTN1A0MZ66 631 aa9.09□□□□□ -0.95
HERC1-208ENST00000560462 KLRG2A4D1S0 409 aaPredicted RBP9.09□□□□□ -0.95
HERC1-208ENST00000560462 PDE4AP27815 886 aa9.09□□□□□ -0.95
HERC1-208ENST00000560462 CANXP27824 592 aaKnown RBP9.09□□□□□ -0.95
HERC1-208ENST00000560462 MFSD10Q14728 455 aa9.09□□□□□ -0.95
HERC1-208ENST00000560462 TNIP1Q15025 636 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms