RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 IL16Q14005 1332 aa18.97■□□□□ 0.63
IDH3A-219ENST00000560414 FKBP4Q02790 459 aaKnown RBP eCLIP18.96■□□□□ 0.63
IDH3A-219ENST00000560414 GOLGA2Q08379 1002 aa18.96■□□□□ 0.63
IDH3A-219ENST00000560414 RIC3Q7Z5B4 369 aa18.96■□□□□ 0.63
IDH3A-219ENST00000560414 RTKN2Q8IZC4 609 aa18.96■□□□□ 0.63
IDH3A-219ENST00000560414 CRAMP1Q96RY5 1269 aa18.96■□□□□ 0.63
IDH3A-219ENST00000560414 ZNF277Q9NRM2 450 aaPredicted RBP18.96■□□□□ 0.63
IDH3A-219ENST00000560414 RNF123Q5XPI4 1314 aa18.96■□□□□ 0.63
IDH3A-219ENST00000560414 SH3TC1Q8TE82 1336 aa18.96■□□□□ 0.63
IDH3A-219ENST00000560414 C19orf67A6NJJ6 358 aa18.95■□□□□ 0.62
IDH3A-219ENST00000560414 TOMM70O94826 608 aa18.95■□□□□ 0.62
IDH3A-219ENST00000560414 TIAM2Q8IVF5 1701 aa18.94■□□□□ 0.62
IDH3A-219ENST00000560414 TWISTNBQ3B726 338 aaPredicted RBP18.94■□□□□ 0.62
IDH3A-219ENST00000560414 RTL5Q5HYW3 569 aaPredicted RBP18.94■□□□□ 0.62
IDH3A-219ENST00000560414 FAM89AQ96GI7 184 aa18.94■□□□□ 0.62
IDH3A-219ENST00000560414 PPEF1O14829 653 aaPredicted RBP18.93■□□□□ 0.62
IDH3A-219ENST00000560414 DPY19L2Q6NUT2 758 aa18.93■□□□□ 0.62
IDH3A-219ENST00000560414 WDR63Q8IWG1 891 aa18.93■□□□□ 0.62
IDH3A-219ENST00000560414 C16orf71Q8IYS4 520 aaPredicted RBP18.93■□□□□ 0.62
IDH3A-219ENST00000560414 MYD88Q99836 296 aa18.93■□□□□ 0.62
IDH3A-219ENST00000560414 FANCIQ9NVI1 1328 aa18.93■□□□□ 0.62
IDH3A-219ENST00000560414 DICER1Q9UPY3 1922 aaKnown RBP18.92■□□□□ 0.62
IDH3A-219ENST00000560414 TRIM28Q13263 835 aaKnown RBP18.92■□□□□ 0.62
IDH3A-219ENST00000560414 ZNF467Q7Z7K2 595 aaPredicted RBP18.92■□□□□ 0.62
IDH3A-219ENST00000560414 CHMP4AQ9BY43 222 aa18.92■□□□□ 0.62
IDH3A-219ENST00000560414 ABCC4O15439 1325 aa18.92■□□□□ 0.62
IDH3A-219ENST00000560414 SNED1Q8TER0 1413 aa18.91■□□□□ 0.62
IDH3A-219ENST00000560414 DDNO94850 711 aaPredicted RBP18.91■□□□□ 0.62
IDH3A-219ENST00000560414 CC2D2BQ6DHV5 1058 aa18.91■□□□□ 0.62
IDH3A-219ENST00000560414 BBXQ8WY36 941 aaPredicted RBP18.91■□□□□ 0.62
IDH3A-219ENST00000560414 STK31Q9BXU1 1019 aa18.91■□□□□ 0.62
IDH3A-219ENST00000560414 POTECB2RU33 542 aa18.9■□□□□ 0.62
IDH3A-219ENST00000560414 VEGFAP15692 232 aaPredicted RBP18.9■□□□□ 0.62
IDH3A-219ENST00000560414 HSPA6P17066 643 aa18.9■□□□□ 0.62
IDH3A-219ENST00000560414 IARSP41252 1262 aaKnown RBP18.9■□□□□ 0.62
IDH3A-219ENST00000560414 G2E3Q7L622 706 aa18.9■□□□□ 0.62
IDH3A-219ENST00000560414 PSMD1Q99460 953 aa18.9■□□□□ 0.62
IDH3A-219ENST00000560414 DDX58O95786 925 aaKnown RBP18.89■□□□□ 0.61
IDH3A-219ENST00000560414 EXOSC9Q06265 439 aaKnown RBP18.89■□□□□ 0.61
IDH3A-219ENST00000560414 DDX46Q7L014 1031 aaKnown RBP18.89■□□□□ 0.61
IDH3A-219ENST00000560414 RBM46Q8TBY0 533 aaKnown RBP18.89■□□□□ 0.61
IDH3A-219ENST00000560414 JARID2Q92833 1246 aaPredicted RBP18.89■□□□□ 0.61
IDH3A-219ENST00000560414 METTL22Q9BUU2 404 aaPredicted RBP18.89■□□□□ 0.61
IDH3A-219ENST00000560414 MAP3K2Q9Y2U5 619 aa18.89■□□□□ 0.61
IDH3A-219ENST00000560414 ATP6V0A2Q9Y487 856 aa18.89■□□□□ 0.61
IDH3A-219ENST00000560414 CEP350Q5VT06 3117 aa18.89■□□□□ 0.61
IDH3A-219ENST00000560414 LAMB2P55268 1798 aa18.88■□□□□ 0.61
IDH3A-219ENST00000560414 PI4KAP2A4QPH2 592 aa18.88■□□□□ 0.61
IDH3A-219ENST00000560414 IRS4O14654 1257 aaPredicted RBP18.88■□□□□ 0.61
IDH3A-219ENST00000560414 HS6ST3Q8IZP7 471 aa18.88■□□□□ 0.61
IDH3A-219ENST00000560414 PI4KAP1Q8N8J0 262 aa18.88■□□□□ 0.61
IDH3A-219ENST00000560414 VAMP4O75379 141 aa18.87■□□□□ 0.61
IDH3A-219ENST00000560414 BBOX1O75936 387 aa18.87■□□□□ 0.61
IDH3A-219ENST00000560414 GRAPQ13588 217 aa18.87■□□□□ 0.61
IDH3A-219ENST00000560414 KSR2Q6VAB6 950 aa18.87■□□□□ 0.61
IDH3A-219ENST00000560414 ZBTB38Q8NAP3 1195 aaPredicted RBP18.87■□□□□ 0.61
IDH3A-219ENST00000560414 GRAPLQ8TC17 118 aaPredicted RBP18.87■□□□□ 0.61
IDH3A-219ENST00000560414 KIF12Q96FN5 646 aa18.87■□□□□ 0.61
IDH3A-219ENST00000560414 DDX60Q8IY21 1712 aaKnown RBP18.86■□□□□ 0.61
IDH3A-219ENST00000560414 ZNF541Q9H0D2 1346 aa18.86■□□□□ 0.61
IDH3A-219ENST00000560414 SF3B3Q15393 1217 aaKnown RBP18.86■□□□□ 0.61
IDH3A-219ENST00000560414 CCDC191Q8NCU4 936 aa18.86■□□□□ 0.61
IDH3A-219ENST00000560414 TMX4Q9H1E5 349 aaPredicted RBP18.86■□□□□ 0.61
IDH3A-219ENST00000560414 CWC25Q9NXE8 425 aaPredicted RBP18.86■□□□□ 0.61
IDH3A-219ENST00000560414 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.86■□□□□ 0.61
IDH3A-219ENST00000560414 PCDHB13Q9Y5F0 798 aa18.86■□□□□ 0.61
IDH3A-219ENST00000560414 MAP3K13O43283 966 aa18.85■□□□□ 0.61
IDH3A-219ENST00000560414 GRIPAP1Q4V328 841 aa18.85■□□□□ 0.61
IDH3A-219ENST00000560414 SP8Q8IXZ3 490 aa18.85■□□□□ 0.61
IDH3A-219ENST00000560414 PCDHB8Q9UN66 801 aa18.85■□□□□ 0.61
IDH3A-219ENST00000560414 TAF1P21675 1872 aa18.85■□□□□ 0.61
IDH3A-219ENST00000560414 WDR90Q96KV7 1748 aa18.84■□□□□ 0.61
IDH3A-219ENST00000560414 FZD9O00144 591 aa18.84■□□□□ 0.61
IDH3A-219ENST00000560414 HAX1O00165 279 aa18.84■□□□□ 0.61
IDH3A-219ENST00000560414 PCCAP05165 728 aaPredicted RBP18.84■□□□□ 0.61
IDH3A-219ENST00000560414 IGKV5-2P06315 115 aa18.84■□□□□ 0.61
IDH3A-219ENST00000560414 LARGE2Q8N3Y3 721 aa18.84■□□□□ 0.61
IDH3A-219ENST00000560414 ZNF579Q8NAF0 562 aaKnown RBP18.84■□□□□ 0.61
IDH3A-219ENST00000560414 JDP2Q8WYK2 163 aa18.84■□□□□ 0.61
IDH3A-219ENST00000560414 CELF1Q92879 486 aaKnown RBP18.84■□□□□ 0.61
IDH3A-219ENST00000560414 PHF12Q96QT6 1004 aa18.84■□□□□ 0.61
IDH3A-219ENST00000560414 COL4A5P29400 1685 aa18.84■□□□□ 0.61
IDH3A-219ENST00000560414 STK25O00506 426 aa18.83■□□□□ 0.6
IDH3A-219ENST00000560414 FSTL1Q12841 308 aa18.83■□□□□ 0.6
IDH3A-219ENST00000560414 FLIIQ13045 1269 aa18.83■□□□□ 0.6
IDH3A-219ENST00000560414 MYH16Q9H6N6 1097 aa18.83■□□□□ 0.6
IDH3A-219ENST00000560414 ZNF521Q96K83 1311 aa18.82■□□□□ 0.6
IDH3A-219ENST00000560414 PLCB2Q00722 1185 aa18.82■□□□□ 0.6
IDH3A-219ENST00000560414 AOC3Q16853 763 aa18.82■□□□□ 0.6
IDH3A-219ENST00000560414 CWF19L2Q2TBE0 894 aaKnown RBP18.82■□□□□ 0.6
IDH3A-219ENST00000560414 DPP8Q6V1X1 898 aaPredicted RBP18.82■□□□□ 0.6
IDH3A-219ENST00000560414 MPNDQ8N594 471 aa18.82■□□□□ 0.6
IDH3A-219ENST00000560414 SMC1BQ8NDV3 1235 aa18.82■□□□□ 0.6
IDH3A-219ENST00000560414 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.81■□□□□ 0.6
IDH3A-219ENST00000560414 PPIP5K2O43314 1243 aa18.81■□□□□ 0.6
IDH3A-219ENST00000560414 NEXNQ0ZGT2 675 aa18.81■□□□□ 0.6
IDH3A-219ENST00000560414 FKBP5Q13451 457 aaPredicted RBP18.81■□□□□ 0.6
IDH3A-219ENST00000560414 ZFP91Q96JP5 570 aaPredicted RBP18.81■□□□□ 0.6
IDH3A-219ENST00000560414 CCDC85AQ96PX6 553 aaPredicted RBP18.81■□□□□ 0.6
IDH3A-219ENST00000560414 SEC31BQ9NQW1 1179 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms