RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 TNNI3KQ59H18 835 aa17.7■□□□□ 0.42
ZEB1-218ENST00000560196 TSHZ3Q63HK5 1081 aa17.7■□□□□ 0.42
ZEB1-218ENST00000560196 SYNE4Q8N205 404 aa17.7■□□□□ 0.42
ZEB1-218ENST00000560196 BCL2L12Q9HB09 334 aa17.7■□□□□ 0.42
ZEB1-218ENST00000560196 LRRC4BQ9NT99 713 aa17.7■□□□□ 0.42
ZEB1-218ENST00000560196 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.7■□□□□ 0.42
ZEB1-218ENST00000560196 FPGT-TNNI3KV9GXZ4 949 aa17.7■□□□□ 0.42
ZEB1-218ENST00000560196 MYH3P11055 1940 aa17.7■□□□□ 0.42
ZEB1-218ENST00000560196 LAMB2P55268 1798 aa17.69■□□□□ 0.42
ZEB1-218ENST00000560196 PLSCR1O15162 318 aa17.69■□□□□ 0.42
ZEB1-218ENST00000560196 ZPR1O75312 459 aa17.69■□□□□ 0.42
ZEB1-218ENST00000560196 MFAP1P55081 439 aaKnown RBP17.69■□□□□ 0.42
ZEB1-218ENST00000560196 ANKRD18BA2A2Z9 1011 aa17.68■□□□□ 0.42
ZEB1-218ENST00000560196 ARHGEF1Q92888 912 aaKnown RBP17.68■□□□□ 0.42
ZEB1-218ENST00000560196 C22orf23Q9BZE7 217 aa17.68■□□□□ 0.42
ZEB1-218ENST00000560196 RGS17Q9UGC6 210 aaPredicted RBP17.68■□□□□ 0.42
ZEB1-218ENST00000560196 ITGA6P23229 1130 aa17.67■□□□□ 0.42
ZEB1-218ENST00000560196 RBM25P49756 843 aaKnown RBP17.67■□□□□ 0.42
ZEB1-218ENST00000560196 TAF7LQ5H9L4 462 aa17.67■□□□□ 0.42
ZEB1-218ENST00000560196 SLC10A5Q5PT55 438 aa17.67■□□□□ 0.42
ZEB1-218ENST00000560196 TRAPPC3LQ5T215 181 aa17.67■□□□□ 0.42
ZEB1-218ENST00000560196 USPL1Q5W0Q7 1092 aa17.67■□□□□ 0.42
ZEB1-218ENST00000560196 CNTROBQ8N137 903 aa17.67■□□□□ 0.42
ZEB1-218ENST00000560196 ZNF594Q96JF6 807 aaPredicted RBP17.67■□□□□ 0.42
ZEB1-218ENST00000560196 NYXQ9GZU5 481 aa17.67■□□□□ 0.42
ZEB1-218ENST00000560196 CCDC8Q9H0W5 538 aaPredicted RBP17.67■□□□□ 0.42
ZEB1-218ENST00000560196 GREM2Q9H772 168 aa17.67■□□□□ 0.42
ZEB1-218ENST00000560196 LRP5O75197 1615 aa17.67■□□□□ 0.42
ZEB1-218ENST00000560196 COL24A1Q17RW2 1714 aa17.67■□□□□ 0.42
ZEB1-218ENST00000560196 TRIM6-TRIM34B2RNG4 842 aa17.66■□□□□ 0.42
ZEB1-218ENST00000560196 LRRC24Q50LG9 513 aa17.66■□□□□ 0.42
ZEB1-218ENST00000560196 CEP126Q9P2H0 1117 aa17.66■□□□□ 0.42
ZEB1-218ENST00000560196 ZNF609O15014 1411 aa17.65■□□□□ 0.42
ZEB1-218ENST00000560196 DDX60Q8IY21 1712 aaKnown RBP17.65■□□□□ 0.42
ZEB1-218ENST00000560196 MSH5O43196 834 aa17.65■□□□□ 0.42
ZEB1-218ENST00000560196 ATP5JP18859 108 aa17.65■□□□□ 0.42
ZEB1-218ENST00000560196 CHMLP26374 656 aa17.65■□□□□ 0.42
ZEB1-218ENST00000560196 SSFA2P28290 1259 aa17.65■□□□□ 0.42
ZEB1-218ENST00000560196 TXNRD1Q16881 649 aa17.65■□□□□ 0.42
ZEB1-218ENST00000560196 CCDC152Q4G0S7 254 aa17.65■□□□□ 0.42
ZEB1-218ENST00000560196 TBC1D9BQ66K14 1250 aa17.65■□□□□ 0.42
ZEB1-218ENST00000560196 RILPL2Q969X0 211 aa17.65■□□□□ 0.42
ZEB1-218ENST00000560196 PUS3Q9BZE2 481 aaKnown RBP17.65■□□□□ 0.42
ZEB1-218ENST00000560196 SRP68Q9UHB9 627 aaKnown RBP17.65■□□□□ 0.42
ZEB1-218ENST00000560196 DBNLQ9UJU6 430 aaKnown RBP17.65■□□□□ 0.42
ZEB1-218ENST00000560196 AKAP2Q9Y2D5 859 aa17.65■□□□□ 0.42
ZEB1-218ENST00000560196 RIPOR2Q9Y4F9 1068 aa17.65■□□□□ 0.42
ZEB1-218ENST00000560196 C4AP0C0L4 1744 aa17.64■□□□□ 0.41
ZEB1-218ENST00000560196 EPB41L2O43491 1005 aaKnown RBP17.64■□□□□ 0.41
ZEB1-218ENST00000560196 REC8O95072 547 aa17.64■□□□□ 0.41
ZEB1-218ENST00000560196 HCLS1P14317 486 aaPredicted RBP17.64■□□□□ 0.41
ZEB1-218ENST00000560196 RFC4P35249 363 aa17.64■□□□□ 0.41
ZEB1-218ENST00000560196 POTEAQ6S8J7 498 aa17.64■□□□□ 0.41
ZEB1-218ENST00000560196 AMIGO3Q86WK7 504 aa17.64■□□□□ 0.41
ZEB1-218ENST00000560196 EVI5LQ96CN4 794 aa17.64■□□□□ 0.41
ZEB1-218ENST00000560196 SETDB2Q96T68 719 aa17.64■□□□□ 0.41
ZEB1-218ENST00000560196 TLR7Q9NYK1 1049 aaKnown RBP17.64■□□□□ 0.41
ZEB1-218ENST00000560196 UBR3Q6ZT12 1888 aa17.64■□□□□ 0.41
ZEB1-218ENST00000560196 SF3B3Q15393 1217 aaKnown RBP17.63■□□□□ 0.41
ZEB1-218ENST00000560196 PROM2Q8N271 834 aa17.63■□□□□ 0.41
ZEB1-218ENST00000560196 LDHAL6AQ6ZMR3 332 aa17.62■□□□□ 0.41
ZEB1-218ENST00000560196 SMIM5Q71RC9 77 aa17.62■□□□□ 0.41
ZEB1-218ENST00000560196 TICAM2Q86XR7 235 aa17.62■□□□□ 0.41
ZEB1-218ENST00000560196 DBNDD2Q9BQY9 259 aa17.62■□□□□ 0.41
ZEB1-218ENST00000560196 ESYT1Q9BSJ8 1104 aa17.62■□□□□ 0.41
ZEB1-218ENST00000560196 RIC1Q4ADV7 1423 aa17.62■□□□□ 0.41
ZEB1-218ENST00000560196 RGPD3A6NKT7 1758 aaPredicted RBP17.61■□□□□ 0.41
ZEB1-218ENST00000560196 RGPD4Q7Z3J3 1758 aa17.61■□□□□ 0.41
ZEB1-218ENST00000560196 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.61■□□□□ 0.41
ZEB1-218ENST00000560196 FAM177BA6PVY3 158 aa17.61■□□□□ 0.41
ZEB1-218ENST00000560196 ERFEQ4G0M1 354 aa17.61■□□□□ 0.41
ZEB1-218ENST00000560196 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.61■□□□□ 0.41
ZEB1-218ENST00000560196 CCDC85AQ96PX6 553 aaPredicted RBP17.61■□□□□ 0.41
ZEB1-218ENST00000560196 USP26Q9BXU7 913 aa17.61■□□□□ 0.41
ZEB1-218ENST00000560196 HIP1O00291 1037 aa17.6■□□□□ 0.41
ZEB1-218ENST00000560196 APBA3O96018 575 aa17.6■□□□□ 0.41
ZEB1-218ENST00000560196 TPTE2Q6XPS3 522 aa17.6■□□□□ 0.41
ZEB1-218ENST00000560196 VGLL2Q8N8G2 317 aa17.6■□□□□ 0.41
ZEB1-218ENST00000560196 MROH5Q6ZUA9 1318 aa17.6■□□□□ 0.41
ZEB1-218ENST00000560196 RFX7Q2KHR2 1363 aa17.6■□□□□ 0.41
ZEB1-218ENST00000560196 ABCC12Q96J65 1359 aa17.6■□□□□ 0.41
ZEB1-218ENST00000560196 AK9Q5TCS8 1911 aa17.59■□□□□ 0.41
ZEB1-218ENST00000560196 CARMIL3Q8ND23 1372 aa17.59■□□□□ 0.41
ZEB1-218ENST00000560196 A0A1B0GUL7 405 aa17.59■□□□□ 0.41
ZEB1-218ENST00000560196 METTL24Q5JXM2 366 aa17.59■□□□□ 0.41
ZEB1-218ENST00000560196 NBPF5PQ86XG9 351 aaPredicted RBP17.59■□□□□ 0.41
ZEB1-218ENST00000560196 HAUS7Q99871 368 aa17.59■□□□□ 0.41
ZEB1-218ENST00000560196 CNNM1Q9NRU3 951 aa17.59■□□□□ 0.41
ZEB1-218ENST00000560196 TNS1Q9HBL0 1735 aaKnown RBP17.58■□□□□ 0.41
ZEB1-218ENST00000560196 PHF14O94880 888 aa17.58■□□□□ 0.4
ZEB1-218ENST00000560196 MAP4K4O95819 1239 aaPredicted RBP17.58■□□□□ 0.4
ZEB1-218ENST00000560196 TIMM10P62072 90 aa17.58■□□□□ 0.4
ZEB1-218ENST00000560196 BICDL1Q6ZP65 573 aa17.58■□□□□ 0.4
ZEB1-218ENST00000560196 RUFY2Q8WXA3 655 aa17.58■□□□□ 0.4
ZEB1-218ENST00000560196 CDC5LQ99459 802 aaKnown RBP17.58■□□□□ 0.4
ZEB1-218ENST00000560196 BOLA2Q9H3K6 86 aa17.58■□□□□ 0.4
ZEB1-218ENST00000560196 SGSM2O43147 1006 aa17.57■□□□□ 0.4
ZEB1-218ENST00000560196 PDE8BO95263 885 aa17.57■□□□□ 0.4
ZEB1-218ENST00000560196 GTF2E1P29083 439 aaPredicted RBP17.57■□□□□ 0.4
ZEB1-218ENST00000560196 IGHMBP2P38935 993 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms