RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 AATKQ6ZMQ8 1374 aa22.45■■□□□ 1.18
SEMA4B-215ENST00000560089 SASH3O75995 380 aa22.44■■□□□ 1.18
SEMA4B-215ENST00000560089 SNW1Q13573 536 aaKnown RBP22.44■■□□□ 1.18
SEMA4B-215ENST00000560089 C19orf44Q9H6X5 657 aa22.44■■□□□ 1.18
SEMA4B-215ENST00000560089 RGS12O14924 1447 aa22.44■■□□□ 1.18
SEMA4B-215ENST00000560089 CDC25BP30305 580 aa22.44■■□□□ 1.18
SEMA4B-215ENST00000560089 HSP90AB2PQ58FF8 381 aa22.44■■□□□ 1.18
SEMA4B-215ENST00000560089 TDRD7Q8NHU6 1098 aaKnown RBP22.44■■□□□ 1.18
SEMA4B-215ENST00000560089 OVOS2A0A0J9YW53 1432 aa22.44■■□□□ 1.18
SEMA4B-215ENST00000560089 OVOS2Q6IE36 1432 aa22.44■■□□□ 1.18
SEMA4B-215ENST00000560089 F13A1P00488 732 aa22.44■■□□□ 1.18
SEMA4B-215ENST00000560089 CCDC93Q567U6 631 aa22.44■■□□□ 1.18
SEMA4B-215ENST00000560089 PALD1Q9ULE6 856 aa22.44■■□□□ 1.18
SEMA4B-215ENST00000560089 STX6O43752 255 aa22.43■■□□□ 1.18
SEMA4B-215ENST00000560089 TBC1D8O95759 1140 aa22.43■■□□□ 1.18
SEMA4B-215ENST00000560089 CEP89Q96ST8 783 aa22.43■■□□□ 1.18
SEMA4B-215ENST00000560089 NWD1Q149M9 1564 aa22.43■■□□□ 1.18
SEMA4B-215ENST00000560089 PNPLA6Q8IY17 1366 aa22.43■■□□□ 1.18
SEMA4B-215ENST00000560089 GORABQ5T7V8 394 aa22.43■■□□□ 1.18
SEMA4B-215ENST00000560089 CKAP2LQ8IYA6 745 aa22.43■■□□□ 1.18
SEMA4B-215ENST00000560089 UPF3BQ9BZI7 483 aaKnown RBP22.43■■□□□ 1.18
SEMA4B-215ENST00000560089 CHMP3Q9Y3E7 222 aa22.43■■□□□ 1.18
SEMA4B-215ENST00000560089 CCDC69A6NI79 296 aa22.42■■□□□ 1.18
SEMA4B-215ENST00000560089 HOMEZQ8IX15 550 aa22.42■■□□□ 1.18
SEMA4B-215ENST00000560089 DCTPP1Q9H773 170 aa22.42■■□□□ 1.18
SEMA4B-215ENST00000560089 STRCQ7RTU9 1775 aa22.42■■□□□ 1.18
SEMA4B-215ENST00000560089 ATF3P18847 181 aa22.42■■□□□ 1.18
SEMA4B-215ENST00000560089 ZNF853P0CG23 659 aa22.41■■□□□ 1.18
SEMA4B-215ENST00000560089 CORO7P57737 925 aa22.41■■□□□ 1.18
SEMA4B-215ENST00000560089 DNM1Q05193 864 aaKnown RBP22.41■■□□□ 1.18
SEMA4B-215ENST00000560089 TTC21AQ8NDW8 1320 aa22.41■■□□□ 1.18
SEMA4B-215ENST00000560089 CCDC189A1A4V9 331 aa22.4■■□□□ 1.18
SEMA4B-215ENST00000560089 CCZ1BP86790 482 aa22.4■■□□□ 1.18
SEMA4B-215ENST00000560089 CCZ1P86791 482 aaPredicted RBP22.4■■□□□ 1.18
SEMA4B-215ENST00000560089 TRIM35Q9UPQ4 493 aa22.4■■□□□ 1.18
SEMA4B-215ENST00000560089 SYT1P21579 422 aa22.4■■□□□ 1.18
SEMA4B-215ENST00000560089 PDRG1Q9NUG6 133 aa22.4■■□□□ 1.18
SEMA4B-215ENST00000560089 MAP3K19Q56UN5 1328 aa22.4■■□□□ 1.18
SEMA4B-215ENST00000560089 PRKAR2BP31323 418 aa22.39■■□□□ 1.18
SEMA4B-215ENST00000560089 IL13P35225 146 aa22.39■■□□□ 1.18
SEMA4B-215ENST00000560089 FOXR1Q6PIV2 292 aa22.39■■□□□ 1.18
SEMA4B-215ENST00000560089 PIK3C2AO00443 1686 aa22.39■■□□□ 1.18
SEMA4B-215ENST00000560089 TMPOP42166 694 aaKnown RBP22.39■■□□□ 1.17
SEMA4B-215ENST00000560089 NBPF20Q3BBV1 942 aa22.39■■□□□ 1.17
SEMA4B-215ENST00000560089 RNF217Q8TC41 542 aa22.39■■□□□ 1.17
SEMA4B-215ENST00000560089 PLEKHF1Q96S99 279 aa22.39■■□□□ 1.17
SEMA4B-215ENST00000560089 TNMDQ9H2S6 317 aa22.39■■□□□ 1.17
SEMA4B-215ENST00000560089 ZSCAN16Q9H4T2 348 aaPredicted RBP22.39■■□□□ 1.17
SEMA4B-215ENST00000560089 CCDC196A0A1B0GTZ2 297 aa22.39■■□□□ 1.17
SEMA4B-215ENST00000560089 ZNF165P49910 485 aa22.39■■□□□ 1.17
SEMA4B-215ENST00000560089 SYTL4Q96C24 671 aaPredicted RBP22.39■■□□□ 1.17
SEMA4B-215ENST00000560089 ANAPC15P60006 121 aa22.38■■□□□ 1.17
SEMA4B-215ENST00000560089 IL16Q14005 1332 aa22.38■■□□□ 1.17
SEMA4B-215ENST00000560089 APBB1O00213 710 aa22.38■■□□□ 1.17
SEMA4B-215ENST00000560089 ANKRD65E5RJM6 399 aa22.37■■□□□ 1.17
SEMA4B-215ENST00000560089 LRCH2Q5VUJ6 765 aa22.37■■□□□ 1.17
SEMA4B-215ENST00000560089 CC2D1AQ6P1N0 951 aaPredicted RBP22.37■■□□□ 1.17
SEMA4B-215ENST00000560089 PHACTR3Q96KR7 559 aa22.37■■□□□ 1.17
SEMA4B-215ENST00000560089 KCND1Q9NSA2 647 aa22.37■■□□□ 1.17
SEMA4B-215ENST00000560089 EIF4A2Q14240 407 aaKnown RBP22.37■■□□□ 1.17
SEMA4B-215ENST00000560089 CPP00450 1065 aa22.36■■□□□ 1.17
SEMA4B-215ENST00000560089 TPM1P09493 284 aa22.36■■□□□ 1.17
SEMA4B-215ENST00000560089 ZRSR1Q15695 479 aaKnown RBP22.36■■□□□ 1.17
SEMA4B-215ENST00000560089 CCDC158Q5M9N0 1113 aa22.36■■□□□ 1.17
SEMA4B-215ENST00000560089 DNAAF4Q8WXU2 420 aa22.36■■□□□ 1.17
SEMA4B-215ENST00000560089 SGSM3Q96HU1 749 aa22.36■■□□□ 1.17
SEMA4B-215ENST00000560089 RAI14Q9P0K7 980 aa22.36■■□□□ 1.17
SEMA4B-215ENST00000560089 AMPHP49418 695 aa22.35■■□□□ 1.17
SEMA4B-215ENST00000560089 LTV1Q96GA3 475 aaPredicted RBP22.35■■□□□ 1.17
SEMA4B-215ENST00000560089 DNAJC25Q9H1X3 360 aa22.35■■□□□ 1.17
SEMA4B-215ENST00000560089 MAP2K1Q02750 393 aaPredicted RBP22.35■■□□□ 1.17
SEMA4B-215ENST00000560089 C1orf167Q5SNV9 1468 aa22.35■■□□□ 1.17
SEMA4B-215ENST00000560089 TULP1O00294 542 aaPredicted RBP22.35■■□□□ 1.17
SEMA4B-215ENST00000560089 LIG1P18858 919 aa22.35■■□□□ 1.17
SEMA4B-215ENST00000560089 RPAINQ86UA6 219 aa22.35■■□□□ 1.17
SEMA4B-215ENST00000560089 USP16Q9Y5T5 823 aa22.35■■□□□ 1.17
SEMA4B-215ENST00000560089 EFCAB13Q8IY85 973 aa22.34■■□□□ 1.17
SEMA4B-215ENST00000560089 MRFAP1L1Q96HT8 127 aa22.34■■□□□ 1.17
SEMA4B-215ENST00000560089 GOLGA6L19H0YKK7 550 aa22.34■■□□□ 1.17
SEMA4B-215ENST00000560089 IRF6O14896 467 aa22.34■■□□□ 1.17
SEMA4B-215ENST00000560089 ANO2Q9NQ90 1003 aa22.34■■□□□ 1.17
SEMA4B-215ENST00000560089 CDK12Q9NYV4 1490 aaPredicted RBP22.34■■□□□ 1.17
SEMA4B-215ENST00000560089 PPP2R5AQ15172 486 aa22.33■■□□□ 1.17
SEMA4B-215ENST00000560089 ARHGAP45Q92619 1136 aa22.33■■□□□ 1.17
SEMA4B-215ENST00000560089 PPP1R13BQ96KQ4 1090 aa22.33■■□□□ 1.17
SEMA4B-215ENST00000560089 ARFGAP3Q9NP61 516 aa22.33■■□□□ 1.17
SEMA4B-215ENST00000560089 USP31Q70CQ4 1352 aa22.33■■□□□ 1.17
SEMA4B-215ENST00000560089 H3BQF6 201 aa22.33■■□□□ 1.16
SEMA4B-215ENST00000560089 RPS6KA5O75582 802 aa22.33■■□□□ 1.16
SEMA4B-215ENST00000560089 TTLL5Q6EMB2 1281 aa22.33■■□□□ 1.16
SEMA4B-215ENST00000560089 KRT28Q7Z3Y7 464 aa22.33■■□□□ 1.16
SEMA4B-215ENST00000560089 PEAK1Q9H792 1746 aa22.33■■□□□ 1.16
SEMA4B-215ENST00000560089 SMC3Q9UQE7 1217 aa22.33■■□□□ 1.16
SEMA4B-215ENST00000560089 TADA3O75528 432 aa22.32■■□□□ 1.16
SEMA4B-215ENST00000560089 MNAT1P51948 309 aa22.32■■□□□ 1.16
SEMA4B-215ENST00000560089 ESYT1Q9BSJ8 1104 aa22.32■■□□□ 1.16
SEMA4B-215ENST00000560089 MKRN1Q9UHC7 482 aaKnown RBP22.32■■□□□ 1.16
SEMA4B-215ENST00000560089 PPP1R12AO14974 1030 aaPredicted RBP22.32■■□□□ 1.16
SEMA4B-215ENST00000560089 SULT6B1Q6IMI4 303 aa22.32■■□□□ 1.16
SEMA4B-215ENST00000560089 VPS18Q9P253 973 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms