RNA–Protein interactions for RNA: ENST00000559793.5

CTDSPL2-208, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-208ENST00000559793 NMRK2Q9NPI5 230 aa11.07□□□□□ -0.64
CTDSPL2-208ENST00000559793 CCDC87Q9NVE4 849 aa11.07□□□□□ -0.64
CTDSPL2-208ENST00000559793 PARP3Q9Y6F1 533 aa11.07□□□□□ -0.64
CTDSPL2-208ENST00000559793 BRCA1P38398 1863 aaKnown RBP11.06□□□□□ -0.64
CTDSPL2-208ENST00000559793 ZNF831Q5JPB2 1677 aa11.06□□□□□ -0.64
CTDSPL2-208ENST00000559793 PLEKHO1Q53GL0 409 aaPredicted RBP11.06□□□□□ -0.64
CTDSPL2-208ENST00000559793 C10orf71Q711Q0 1435 aa11.06□□□□□ -0.64
CTDSPL2-208ENST00000559793 COL5A3P25940 1745 aaPredicted RBP11.06□□□□□ -0.64
CTDSPL2-208ENST00000559793 CNTNAP4Q9C0A0 1308 aa11.06□□□□□ -0.64
CTDSPL2-208ENST00000559793 PTCD1O75127 700 aaKnown RBP11.05□□□□□ -0.64
CTDSPL2-208ENST00000559793 HSP90AB1P08238 724 aaKnown RBP11.05□□□□□ -0.64
CTDSPL2-208ENST00000559793 C4AP0C0L4 1744 aa11.05□□□□□ -0.64
CTDSPL2-208ENST00000559793 CABP4P57796 275 aa11.05□□□□□ -0.64
CTDSPL2-208ENST00000559793 GRIPAP1Q4V328 841 aa11.05□□□□□ -0.64
CTDSPL2-208ENST00000559793 POLR3GLQ9BT43 218 aa11.05□□□□□ -0.64
CTDSPL2-208ENST00000559793 MTHFSP49914 203 aa11.04□□□□□ -0.64
CTDSPL2-208ENST00000559793 USP46P62068 366 aa11.04□□□□□ -0.64
CTDSPL2-208ENST00000559793 C9orf131Q5VYM1 1079 aa11.04□□□□□ -0.64
CTDSPL2-208ENST00000559793 ZNF530Q6P9A1 599 aaPredicted RBP11.04□□□□□ -0.64
CTDSPL2-208ENST00000559793 NFATC2IPQ8NCF5 419 aa11.04□□□□□ -0.64
CTDSPL2-208ENST00000559793 PIM2Q9P1W9 311 aa11.04□□□□□ -0.64
CTDSPL2-208ENST00000559793 SRP68Q9UHB9 627 aaKnown RBP11.04□□□□□ -0.64
CTDSPL2-208ENST00000559793 PLEKHG2Q9H7P9 1386 aa11.03□□□□□ -0.64
CTDSPL2-208ENST00000559793 KDM6AO15550 1401 aaPredicted RBP11.03□□□□□ -0.64
CTDSPL2-208ENST00000559793 ARFGEF1Q9Y6D6 1849 aa11.03□□□□□ -0.64
CTDSPL2-208ENST00000559793 TLL1O43897 1013 aa11.03□□□□□ -0.64
CTDSPL2-208ENST00000559793 MS4A1P11836 297 aa11.03□□□□□ -0.64
CTDSPL2-208ENST00000559793 CRKLP46109 303 aaKnown RBP11.03□□□□□ -0.64
CTDSPL2-208ENST00000559793 AMOTQ4VCS5 1084 aa11.03□□□□□ -0.64
CTDSPL2-208ENST00000559793 AEBP1Q8IUX7 1158 aa11.03□□□□□ -0.64
CTDSPL2-208ENST00000559793 SLC27A5Q9Y2P5 690 aa11.03□□□□□ -0.64
CTDSPL2-208ENST00000559793 SBF1O95248 1867 aa11.02□□□□□ -0.64
CTDSPL2-208ENST00000559793 TM4SF1P30408 202 aa11.02□□□□□ -0.65
CTDSPL2-208ENST00000559793 HTRA3P83110 453 aa11.02□□□□□ -0.65
CTDSPL2-208ENST00000559793 DDR1Q08345 913 aa11.02□□□□□ -0.65
CTDSPL2-208ENST00000559793 INTS5Q6P9B9 1019 aaKnown RBP11.02□□□□□ -0.65
CTDSPL2-208ENST00000559793 NUTM1Q86Y26 1132 aa11.02□□□□□ -0.65
CTDSPL2-208ENST00000559793 PANK3Q9H999 370 aa11.02□□□□□ -0.65
CTDSPL2-208ENST00000559793 CHRNA5P30532 468 aa11.01□□□□□ -0.65
CTDSPL2-208ENST00000559793 TPRNQ4KMQ1 711 aa11.01□□□□□ -0.65
CTDSPL2-208ENST00000559793 DALRD3Q5D0E6 543 aaKnown RBP11.01□□□□□ -0.65
CTDSPL2-208ENST00000559793 PPP1R18Q6NYC8 613 aa11.01□□□□□ -0.65
CTDSPL2-208ENST00000559793 BEGAINQ9BUH8 593 aa11.01□□□□□ -0.65
CTDSPL2-208ENST00000559793 RRAGCQ9HB90 399 aa11.01□□□□□ -0.65
CTDSPL2-208ENST00000559793 TIMELESSQ9UNS1 1208 aa11.01□□□□□ -0.65
CTDSPL2-208ENST00000559793 USP42Q9H9J4 1324 aaKnown RBP11.01□□□□□ -0.65
CTDSPL2-208ENST00000559793 HOXA2O43364 376 aa11□□□□□ -0.65
CTDSPL2-208ENST00000559793 ADH1BP00325 375 aa11□□□□□ -0.65
CTDSPL2-208ENST00000559793 C1orf141Q5JVX7 400 aa11□□□□□ -0.65
CTDSPL2-208ENST00000559793 SULT6B1Q6IMI4 303 aa11□□□□□ -0.65
CTDSPL2-208ENST00000559793 THAP11Q96EK4 314 aa11□□□□□ -0.65
CTDSPL2-208ENST00000559793 SALL2Q9Y467 1007 aaPredicted RBP11□□□□□ -0.65
CTDSPL2-208ENST00000559793 WDR90Q96KV7 1748 aa10.99□□□□□ -0.65
CTDSPL2-208ENST00000559793 POLRMTO00411 1230 aaKnown RBP10.99□□□□□ -0.65
CTDSPL2-208ENST00000559793 FSTL1Q12841 308 aa10.99□□□□□ -0.65
CTDSPL2-208ENST00000559793 C16orf71Q8IYS4 520 aaPredicted RBP10.99□□□□□ -0.65
CTDSPL2-208ENST00000559793 SPIRE2Q8WWL2 714 aa10.99□□□□□ -0.65
CTDSPL2-208ENST00000559793 LGR6Q9HBX8 967 aa10.99□□□□□ -0.65
CTDSPL2-208ENST00000559793 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.99□□□□□ -0.65
CTDSPL2-208ENST00000559793 RNF181Q9P0P0 153 aa10.99□□□□□ -0.65
CTDSPL2-208ENST00000559793 KCPQ6ZWJ8 1503 aa10.99□□□□□ -0.65
CTDSPL2-208ENST00000559793 ADAMTS7Q9UKP4 1686 aa10.98□□□□□ -0.65
CTDSPL2-208ENST00000559793 RGS20O76081 388 aa10.98□□□□□ -0.65
CTDSPL2-208ENST00000559793 IL13P35225 146 aa10.98□□□□□ -0.65
CTDSPL2-208ENST00000559793 TRIM26Q12899 539 aaPredicted RBP10.98□□□□□ -0.65
CTDSPL2-208ENST00000559793 USPL1Q5W0Q7 1092 aa10.98□□□□□ -0.65
CTDSPL2-208ENST00000559793 MORC1Q86VD1 984 aa10.98□□□□□ -0.65
CTDSPL2-208ENST00000559793 DNAJC10Q8IXB1 793 aa10.98□□□□□ -0.65
CTDSPL2-208ENST00000559793 JMYQ8N9B5 988 aa10.98□□□□□ -0.65
CTDSPL2-208ENST00000559793 HLA-CQ95604 372 aa10.98□□□□□ -0.65
CTDSPL2-208ENST00000559793 KLRG1Q96E93 195 aa10.98□□□□□ -0.65
CTDSPL2-208ENST00000559793 SPSB2Q99619 263 aa10.98□□□□□ -0.65
CTDSPL2-208ENST00000559793 KDM2BQ8NHM5 1336 aa10.98□□□□□ -0.65
CTDSPL2-208ENST00000559793 TJP1Q07157 1748 aa10.98□□□□□ -0.65
CTDSPL2-208ENST00000559793 SCN11AQ9UI33 1791 aa10.98□□□□□ -0.65
CTDSPL2-208ENST00000559793 FMNL1O95466 1100 aaPredicted RBP10.97□□□□□ -0.65
CTDSPL2-208ENST00000559793 PRELPP51888 382 aa10.97□□□□□ -0.65
CTDSPL2-208ENST00000559793 COL13A1Q5TAT6 717 aaPredicted RBP10.97□□□□□ -0.65
CTDSPL2-208ENST00000559793 BRICD5Q6PL45 260 aa10.97□□□□□ -0.65
CTDSPL2-208ENST00000559793 CCDC88AQ3V6T2 1871 aa10.97□□□□□ -0.65
CTDSPL2-208ENST00000559793 AFDNP55196 1824 aaKnown RBP10.96□□□□□ -0.65
CTDSPL2-208ENST00000559793 HSPA5P11021 654 aaKnown RBP10.96□□□□□ -0.65
CTDSPL2-208ENST00000559793 CYP19A1P11511 503 aaPredicted RBP10.96□□□□□ -0.65
CTDSPL2-208ENST00000559793 SLC39A6Q13433 755 aa10.96□□□□□ -0.65
CTDSPL2-208ENST00000559793 NFIXQ14938 502 aa10.96□□□□□ -0.65
CTDSPL2-208ENST00000559793 SLC52A2Q9HAB3 445 aa10.96□□□□□ -0.65
CTDSPL2-208ENST00000559793 SOS1Q07889 1333 aaPredicted RBP10.95□□□□□ -0.66
CTDSPL2-208ENST00000559793 GGCXP38435 758 aa10.95□□□□□ -0.66
CTDSPL2-208ENST00000559793 EIF4G2P78344 907 aaKnown RBP eCLIP10.95□□□□□ -0.66
CTDSPL2-208ENST00000559793 RASSF7Q02833 373 aa10.95□□□□□ -0.66
CTDSPL2-208ENST00000559793 Q3C1V9 767 aa10.95□□□□□ -0.66
CTDSPL2-208ENST00000559793 AKAP4Q5JQC9 854 aa10.95□□□□□ -0.66
CTDSPL2-208ENST00000559793 RNF19BQ6ZMZ0 732 aa10.95□□□□□ -0.66
CTDSPL2-208ENST00000559793 NARFQ9UHQ1 456 aa10.95□□□□□ -0.66
CTDSPL2-208ENST00000559793 VIRMAQ69YN4 1812 aaKnown RBP10.94□□□□□ -0.66
CTDSPL2-208ENST00000559793 RNMTO43148 476 aaKnown RBP10.94□□□□□ -0.66
CTDSPL2-208ENST00000559793 SERPINB2P05120 415 aa10.94□□□□□ -0.66
CTDSPL2-208ENST00000559793 GUCA2AQ02747 115 aa10.94□□□□□ -0.66
CTDSPL2-208ENST00000559793 TBC1D2Q9BYX2 928 aa10.94□□□□□ -0.66
CTDSPL2-208ENST00000559793 SLC6A16Q9GZN6 736 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms