RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 CCER2I3L3R5 266 aa16.13■□□□□ 0.17
LRRC28-214ENST00000559433 HSP90B1P14625 803 aaKnown RBP16.13■□□□□ 0.17
LRRC28-214ENST00000559433 FSTL1Q12841 308 aa16.13■□□□□ 0.17
LRRC28-214ENST00000559433 JDP2Q8WYK2 163 aa16.13■□□□□ 0.17
LRRC28-214ENST00000559433 ATP6V0A2Q9Y487 856 aa16.13■□□□□ 0.17
LRRC28-214ENST00000559433 LRRC37AA6NMS7 1700 aa16.13■□□□□ 0.17
LRRC28-214ENST00000559433 ZNF521Q96K83 1311 aa16.13■□□□□ 0.17
LRRC28-214ENST00000559433 BBOX1O75936 387 aa16.12■□□□□ 0.17
LRRC28-214ENST00000559433 APLP1P51693 650 aa16.12■□□□□ 0.17
LRRC28-214ENST00000559433 NEXNQ0ZGT2 675 aa16.12■□□□□ 0.17
LRRC28-214ENST00000559433 FLIIQ13045 1269 aa16.12■□□□□ 0.17
LRRC28-214ENST00000559433 GRAPQ13588 217 aa16.12■□□□□ 0.17
LRRC28-214ENST00000559433 GRAPLQ8TC17 118 aaPredicted RBP16.12■□□□□ 0.17
LRRC28-214ENST00000559433 PCCAP05165 728 aaPredicted RBP16.11■□□□□ 0.17
LRRC28-214ENST00000559433 FKBP5Q13451 457 aaPredicted RBP16.11■□□□□ 0.17
LRRC28-214ENST00000559433 SF3B3Q15393 1217 aaKnown RBP16.11■□□□□ 0.17
LRRC28-214ENST00000559433 SMC1BQ8NDV3 1235 aa16.11■□□□□ 0.17
LRRC28-214ENST00000559433 CEP350Q5VT06 3117 aa16.11■□□□□ 0.17
LRRC28-214ENST00000559433 COL4A1P02462 1669 aa16.11■□□□□ 0.17
LRRC28-214ENST00000559433 COL4A5P29400 1685 aa16.11■□□□□ 0.17
LRRC28-214ENST00000559433 DDNO94850 711 aaPredicted RBP16.1■□□□□ 0.17
LRRC28-214ENST00000559433 HOXD11P31277 338 aaPredicted RBP16.1■□□□□ 0.17
LRRC28-214ENST00000559433 SP8Q8IXZ3 490 aa16.1■□□□□ 0.17
LRRC28-214ENST00000559433 JARID2Q92833 1246 aaPredicted RBP16.1■□□□□ 0.17
LRRC28-214ENST00000559433 ZNF541Q9H0D2 1346 aa16.1■□□□□ 0.17
LRRC28-214ENST00000559433 SCN4AP35499 1836 aa16.1■□□□□ 0.17
LRRC28-214ENST00000559433 IGKV5-2P06315 115 aa16.09■□□□□ 0.17
LRRC28-214ENST00000559433 TMC4Q7Z404 712 aa16.09■□□□□ 0.17
LRRC28-214ENST00000559433 LARGE2Q8N3Y3 721 aa16.09■□□□□ 0.17
LRRC28-214ENST00000559433 SUPT20HQ8NEM7 779 aa16.09■□□□□ 0.17
LRRC28-214ENST00000559433 SPEF2Q9C093 1822 aa16.08■□□□□ 0.17
LRRC28-214ENST00000559433 IQCA1LA6NCM1 817 aa16.08■□□□□ 0.16
LRRC28-214ENST00000559433 NEURL1BA8MQ27 555 aa16.08■□□□□ 0.16
LRRC28-214ENST00000559433 EIF6P56537 245 aaKnown RBP16.08■□□□□ 0.16
LRRC28-214ENST00000559433 CWF19L2Q2TBE0 894 aaKnown RBP16.08■□□□□ 0.16
LRRC28-214ENST00000559433 DPP8Q6V1X1 898 aaPredicted RBP16.08■□□□□ 0.16
LRRC28-214ENST00000559433 MPNDQ8N594 471 aa16.08■□□□□ 0.16
LRRC28-214ENST00000559433 CELF1Q92879 486 aaKnown RBP16.08■□□□□ 0.16
LRRC28-214ENST00000559433 CDHR2Q9BYE9 1310 aa16.08■□□□□ 0.16
LRRC28-214ENST00000559433 POTECB2RU33 542 aa16.07■□□□□ 0.16
LRRC28-214ENST00000559433 PPIP5K2O43314 1243 aa16.07■□□□□ 0.16
LRRC28-214ENST00000559433 PDE8AO60658 829 aa16.07■□□□□ 0.16
LRRC28-214ENST00000559433 DNAAF4Q8WXU2 420 aa16.07■□□□□ 0.16
LRRC28-214ENST00000559433 DUOX1Q9NRD9 1551 aa16.07■□□□□ 0.16
LRRC28-214ENST00000559433 E9PSI1 815 aa16.06■□□□□ 0.16
LRRC28-214ENST00000559433 FZD9O00144 591 aa16.06■□□□□ 0.16
LRRC28-214ENST00000559433 AOC3Q16853 763 aa16.06■□□□□ 0.16
LRRC28-214ENST00000559433 CCDC152Q4G0S7 254 aa16.06■□□□□ 0.16
LRRC28-214ENST00000559433 NIM1KQ8IY84 436 aa16.06■□□□□ 0.16
LRRC28-214ENST00000559433 RTFDC1Q9BY42 306 aaPredicted RBP16.06■□□□□ 0.16
LRRC28-214ENST00000559433 LTBP1Q14766 1721 aa16.05■□□□□ 0.16
LRRC28-214ENST00000559433 L3MBTL3Q96JM7 780 aaPredicted RBP16.05■□□□□ 0.16
LRRC28-214ENST00000559433 CCDC85AQ96PX6 553 aaPredicted RBP16.05■□□□□ 0.16
LRRC28-214ENST00000559433 VPS33BQ9H267 617 aa16.05■□□□□ 0.16
LRRC28-214ENST00000559433 SEC31BQ9NQW1 1179 aa16.05■□□□□ 0.16
LRRC28-214ENST00000559433 GJA3Q9Y6H8 435 aa16.05■□□□□ 0.16
LRRC28-214ENST00000559433 CTSWP56202 376 aa16.04■□□□□ 0.16
LRRC28-214ENST00000559433 RPS8P62241 208 aaKnown RBP16.04■□□□□ 0.16
LRRC28-214ENST00000559433 GCKRQ14397 625 aa16.04■□□□□ 0.16
LRRC28-214ENST00000559433 DIEXFQ68CQ4 756 aaKnown RBP16.04■□□□□ 0.16
LRRC28-214ENST00000559433 UBE3BQ7Z3V4 1068 aa16.04■□□□□ 0.16
LRRC28-214ENST00000559433 LINS1Q8NG48 757 aa16.04■□□□□ 0.16
LRRC28-214ENST00000559433 CLEC11AQ9Y240 323 aa16.04■□□□□ 0.16
LRRC28-214ENST00000559433 F6X3S4 739 aa16.03■□□□□ 0.16
LRRC28-214ENST00000559433 LMOD1P29536 600 aaPredicted RBP16.03■□□□□ 0.16
LRRC28-214ENST00000559433 SLFN5Q08AF3 891 aa16.03■□□□□ 0.16
LRRC28-214ENST00000559433 GPC2Q8N158 579 aa16.03■□□□□ 0.16
LRRC28-214ENST00000559433 HACL1Q9UJ83 578 aa16.03■□□□□ 0.16
LRRC28-214ENST00000559433 H7C1W4 665 aa16.02■□□□□ 0.16
LRRC28-214ENST00000559433 GPSM2P81274 684 aa16.02■□□□□ 0.16
LRRC28-214ENST00000559433 KIAA2012Q0VF49 1180 aa16.02■□□□□ 0.16
LRRC28-214ENST00000559433 EAPPQ56P03 285 aaPredicted RBP16.02■□□□□ 0.16
LRRC28-214ENST00000559433 CHADLQ6NUI6 762 aa16.02■□□□□ 0.16
LRRC28-214ENST00000559433 NSFL1CQ9UNZ2 370 aaKnown RBP16.02■□□□□ 0.16
LRRC28-214ENST00000559433 PNMA8AQ86V59 439 aaPredicted RBP16.01■□□□□ 0.15
LRRC28-214ENST00000559433 ANKRD18AQ8IVF6 992 aa16.01■□□□□ 0.15
LRRC28-214ENST00000559433 CDCA7LQ96GN5 454 aa16.01■□□□□ 0.15
LRRC28-214ENST00000559433 TAF1DQ9H5J8 278 aaPredicted RBP16.01■□□□□ 0.15
LRRC28-214ENST00000559433 C6orf229H3BNL8 230 aa16■□□□□ 0.15
LRRC28-214ENST00000559433 MIER1Q8N108 512 aa16■□□□□ 0.15
LRRC28-214ENST00000559433 TTLL11Q8NHH1 800 aa16■□□□□ 0.15
LRRC28-214ENST00000559433 CDC5LQ99459 802 aaKnown RBP16■□□□□ 0.15
LRRC28-214ENST00000559433 GREM2Q9H772 168 aa16■□□□□ 0.15
LRRC28-214ENST00000559433 ZNRF3Q9ULT6 936 aa16■□□□□ 0.15
LRRC28-214ENST00000559433 RTL9Q8NET4 1388 aa16■□□□□ 0.15
LRRC28-214ENST00000559433 G3V3G9 751 aa15.99■□□□□ 0.15
LRRC28-214ENST00000559433 POTEIP0CG38 1075 aa15.99■□□□□ 0.15
LRRC28-214ENST00000559433 POTEJP0CG39 1038 aa15.99■□□□□ 0.15
LRRC28-214ENST00000559433 EPHX2P34913 555 aa15.99■□□□□ 0.15
LRRC28-214ENST00000559433 CASP7P55210 303 aa15.99■□□□□ 0.15
LRRC28-214ENST00000559433 WASHC4Q2M389 1173 aa15.99■□□□□ 0.15
LRRC28-214ENST00000559433 BEND3Q5T5X7 828 aa15.99■□□□□ 0.15
LRRC28-214ENST00000559433 DCAF8Q5TAQ9 597 aa15.99■□□□□ 0.15
LRRC28-214ENST00000559433 LDHDQ86WU2 507 aa15.99■□□□□ 0.15
LRRC28-214ENST00000559433 ANKIB1Q9P2G1 1089 aa15.99■□□□□ 0.15
LRRC28-214ENST00000559433 POLLQ9UGP5 575 aa15.99■□□□□ 0.15
LRRC28-214ENST00000559433 ADAMTSL1Q8N6G6 1762 aa15.99■□□□□ 0.15
LRRC28-214ENST00000559433 RIMBP2O15034 1052 aa15.98■□□□□ 0.15
LRRC28-214ENST00000559433 TNIP1Q15025 636 aa15.98■□□□□ 0.15
LRRC28-214ENST00000559433 SLC4A10Q6U841 1118 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms