RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 DIEXFQ68CQ4 756 aaKnown RBP10.46□□□□□ -0.73
SNX1-207ENST00000559401 DPP8Q6V1X1 898 aaPredicted RBP10.46□□□□□ -0.73
SNX1-207ENST00000559401 LARGE2Q8N3Y3 721 aa10.46□□□□□ -0.73
SNX1-207ENST00000559401 CCDC85AQ96PX6 553 aaPredicted RBP10.46□□□□□ -0.73
SNX1-207ENST00000559401 PSMD1Q99460 953 aa10.46□□□□□ -0.73
SNX1-207ENST00000559401 ATP6V0A2Q9Y487 856 aa10.46□□□□□ -0.73
SNX1-207ENST00000559401 SPEF2Q9C093 1822 aa10.46□□□□□ -0.74
SNX1-207ENST00000559401 LRRC37AA6NMS7 1700 aa10.45□□□□□ -0.74
SNX1-207ENST00000559401 SNED1Q8TER0 1413 aa10.45□□□□□ -0.74
SNX1-207ENST00000559401 ZNF521Q96K83 1311 aa10.45□□□□□ -0.74
SNX1-207ENST00000559401 ZNF541Q9H0D2 1346 aa10.45□□□□□ -0.74
SNX1-207ENST00000559401 PPIP5K2O43314 1243 aa10.45□□□□□ -0.74
SNX1-207ENST00000559401 IGKV5-2P06315 115 aa10.45□□□□□ -0.74
SNX1-207ENST00000559401 TMC4Q7Z404 712 aa10.45□□□□□ -0.74
SNX1-207ENST00000559401 MPNDQ8N594 471 aa10.45□□□□□ -0.74
SNX1-207ENST00000559401 SUPT20HQ8NEM7 779 aa10.45□□□□□ -0.74
SNX1-207ENST00000559401 DNAAF4Q8WXU2 420 aa10.45□□□□□ -0.74
SNX1-207ENST00000559401 NEURL1BA8MQ27 555 aa10.44□□□□□ -0.74
SNX1-207ENST00000559401 E9PSI1 815 aa10.44□□□□□ -0.74
SNX1-207ENST00000559401 PDE8AO60658 829 aa10.44□□□□□ -0.74
SNX1-207ENST00000559401 EIF6P56537 245 aaKnown RBP10.44□□□□□ -0.74
SNX1-207ENST00000559401 SF3B3Q15393 1217 aaKnown RBP10.44□□□□□ -0.74
SNX1-207ENST00000559401 AOC3Q16853 763 aa10.44□□□□□ -0.74
SNX1-207ENST00000559401 CCDC152Q4G0S7 254 aa10.44□□□□□ -0.74
SNX1-207ENST00000559401 UBE3BQ7Z3V4 1068 aa10.44□□□□□ -0.74
SNX1-207ENST00000559401 SP8Q8IXZ3 490 aa10.44□□□□□ -0.74
SNX1-207ENST00000559401 NIM1KQ8IY84 436 aa10.44□□□□□ -0.74
SNX1-207ENST00000559401 RBM46Q8TBY0 533 aaKnown RBP10.44□□□□□ -0.74
SNX1-207ENST00000559401 CELF1Q92879 486 aaKnown RBP10.44□□□□□ -0.74
SNX1-207ENST00000559401 GJA3Q9Y6H8 435 aa10.44□□□□□ -0.74
SNX1-207ENST00000559401 COL4A1P02462 1669 aa10.44□□□□□ -0.74
SNX1-207ENST00000559401 COL4A5P29400 1685 aa10.44□□□□□ -0.74
SNX1-207ENST00000559401 CDHR2Q9BYE9 1310 aa10.43□□□□□ -0.74
SNX1-207ENST00000559401 SCN4AP35499 1836 aa10.43□□□□□ -0.74
SNX1-207ENST00000559401 F6X3S4 739 aa10.43□□□□□ -0.74
SNX1-207ENST00000559401 HSPA6P17066 643 aa10.43□□□□□ -0.74
SNX1-207ENST00000559401 LINS1Q8NG48 757 aa10.43□□□□□ -0.74
SNX1-207ENST00000559401 SEC31BQ9NQW1 1179 aa10.43□□□□□ -0.74
SNX1-207ENST00000559401 NSFL1CQ9UNZ2 370 aaKnown RBP10.43□□□□□ -0.74
SNX1-207ENST00000559401 IQCA1LA6NCM1 817 aa10.42□□□□□ -0.74
SNX1-207ENST00000559401 C6orf229H3BNL8 230 aa10.42□□□□□ -0.74
SNX1-207ENST00000559401 CTSWP56202 376 aa10.42□□□□□ -0.74
SNX1-207ENST00000559401 RPS8P62241 208 aaKnown RBP10.42□□□□□ -0.74
SNX1-207ENST00000559401 GCKRQ14397 625 aa10.42□□□□□ -0.74
SNX1-207ENST00000559401 SLC4A10Q6U841 1118 aa10.42□□□□□ -0.74
SNX1-207ENST00000559401 MIER1Q8N108 512 aa10.42□□□□□ -0.74
SNX1-207ENST00000559401 SMC1BQ8NDV3 1235 aa10.42□□□□□ -0.74
SNX1-207ENST00000559401 DUOX1Q9NRD9 1551 aa10.42□□□□□ -0.74
SNX1-207ENST00000559401 POTECB2RU33 542 aa10.41□□□□□ -0.74
SNX1-207ENST00000559401 FZD9O00144 591 aa10.41□□□□□ -0.74
SNX1-207ENST00000559401 SLFN5Q08AF3 891 aa10.41□□□□□ -0.74
SNX1-207ENST00000559401 FSTL1Q12841 308 aa10.41□□□□□ -0.74
SNX1-207ENST00000559401 EAPPQ56P03 285 aaPredicted RBP10.41□□□□□ -0.74
SNX1-207ENST00000559401 ANKRD18AQ8IVF6 992 aa10.41□□□□□ -0.74
SNX1-207ENST00000559401 CDCA7LQ96GN5 454 aa10.41□□□□□ -0.74
SNX1-207ENST00000559401 RIMBP2O15034 1052 aa10.4□□□□□ -0.74
SNX1-207ENST00000559401 LMOD1P29536 600 aaPredicted RBP10.4□□□□□ -0.74
SNX1-207ENST00000559401 GPSM2P81274 684 aa10.4□□□□□ -0.74
SNX1-207ENST00000559401 GPC2Q8N158 579 aa10.4□□□□□ -0.74
SNX1-207ENST00000559401 L3MBTL3Q96JM7 780 aaPredicted RBP10.4□□□□□ -0.74
SNX1-207ENST00000559401 CDC5LQ99459 802 aaKnown RBP10.4□□□□□ -0.74
SNX1-207ENST00000559401 EYA3Q99504 573 aa10.4□□□□□ -0.74
SNX1-207ENST00000559401 BCL2L13Q9BXK5 485 aa10.4□□□□□ -0.74
SNX1-207ENST00000559401 RTFDC1Q9BY42 306 aaPredicted RBP10.4□□□□□ -0.74
SNX1-207ENST00000559401 VPS33BQ9H267 617 aa10.4□□□□□ -0.74
SNX1-207ENST00000559401 ANKIB1Q9P2G1 1089 aa10.4□□□□□ -0.74
SNX1-207ENST00000559401 HACL1Q9UJ83 578 aa10.4□□□□□ -0.74
SNX1-207ENST00000559401 LTBP1Q14766 1721 aa10.39□□□□□ -0.75
SNX1-207ENST00000559401 G3V3G9 751 aa10.39□□□□□ -0.75
SNX1-207ENST00000559401 H7C1W4 665 aa10.39□□□□□ -0.75
SNX1-207ENST00000559401 UFL1O94874 794 aa10.39□□□□□ -0.75
SNX1-207ENST00000559401 APLP1P51693 650 aa10.39□□□□□ -0.75
SNX1-207ENST00000559401 KIAA2012Q0VF49 1180 aa10.39□□□□□ -0.75
SNX1-207ENST00000559401 WASHC4Q2M389 1173 aa10.39□□□□□ -0.75
SNX1-207ENST00000559401 DCAF8Q5TAQ9 597 aa10.39□□□□□ -0.75
SNX1-207ENST00000559401 TTLL11Q8NHH1 800 aa10.39□□□□□ -0.75
SNX1-207ENST00000559401 GPR101Q96P66 508 aaPredicted RBP10.39□□□□□ -0.75
SNX1-207ENST00000559401 SRCIN1Q9C0H9 1055 aa10.39□□□□□ -0.75
SNX1-207ENST00000559401 GREM2Q9H772 168 aa10.39□□□□□ -0.75
SNX1-207ENST00000559401 ZNRF3Q9ULT6 936 aa10.39□□□□□ -0.75
SNX1-207ENST00000559401 CLEC11AQ9Y240 323 aa10.39□□□□□ -0.75
SNX1-207ENST00000559401 CHMP3Q9Y3E7 222 aa10.39□□□□□ -0.75
SNX1-207ENST00000559401 POTEIP0CG38 1075 aa10.38□□□□□ -0.75
SNX1-207ENST00000559401 POTEJP0CG39 1038 aa10.38□□□□□ -0.75
SNX1-207ENST00000559401 EPHX2P34913 555 aa10.38□□□□□ -0.75
SNX1-207ENST00000559401 IGHMBP2P38935 993 aaKnown RBP10.38□□□□□ -0.75
SNX1-207ENST00000559401 BEND3Q5T5X7 828 aa10.38□□□□□ -0.75
SNX1-207ENST00000559401 MRPL50Q8N5N7 158 aaKnown RBP10.38□□□□□ -0.75
SNX1-207ENST00000559401 SSH1Q8WYL5 1049 aa10.38□□□□□ -0.75
SNX1-207ENST00000559401 TAF1DQ9H5J8 278 aaPredicted RBP10.38□□□□□ -0.75
SNX1-207ENST00000559401 DBNDD1Q9H9R9 158 aa10.38□□□□□ -0.75
SNX1-207ENST00000559401 SMC4Q9NTJ3 1288 aa10.38□□□□□ -0.75
SNX1-207ENST00000559401 C9orf78Q9NZ63 289 aaPredicted RBP10.38□□□□□ -0.75
SNX1-207ENST00000559401 GGA1Q9UJY5 639 aa10.38□□□□□ -0.75
SNX1-207ENST00000559401 RAD17O75943 681 aa10.37□□□□□ -0.75
SNX1-207ENST00000559401 ITGA6P23229 1130 aa10.37□□□□□ -0.75
SNX1-207ENST00000559401 HNRNPUQ00839 825 aaKnown RBP eCLIP10.37□□□□□ -0.75
SNX1-207ENST00000559401 CXCL9Q07325 125 aa10.37□□□□□ -0.75
SNX1-207ENST00000559401 FAM161AQ3B820 660 aa10.37□□□□□ -0.75
SNX1-207ENST00000559401 CIAPIN1Q6FI81 312 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms