RNA–Protein interactions for RNA: ENST00000558886.1

NEO1-205, Transcript of neogenin 1, humanhuman

TSL 2

Gene NEO1, Length 543 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-205ENST00000558886 ALDH1B1P30837 517 aa13.06□□□□□ -0.32
NEO1-205ENST00000558886 SF3B3Q15393 1217 aaKnown RBP13.06□□□□□ -0.32
NEO1-205ENST00000558886 TAF7LQ5H9L4 462 aa13.06□□□□□ -0.32
NEO1-205ENST00000558886 LMBR1LQ6UX01 489 aa13.06□□□□□ -0.32
NEO1-205ENST00000558886 MASTLQ96GX5 879 aa13.06□□□□□ -0.32
NEO1-205ENST00000558886 TMX4Q9H1E5 349 aaPredicted RBP13.06□□□□□ -0.32
NEO1-205ENST00000558886 BICC1Q9H694 974 aaKnown RBP13.06□□□□□ -0.32
NEO1-205ENST00000558886 C10orf71Q711Q0 1435 aa13.05□□□□□ -0.32
NEO1-205ENST00000558886 ANKRD18BA2A2Z9 1011 aa13.05□□□□□ -0.32
NEO1-205ENST00000558886 KLRG2A4D1S0 409 aaPredicted RBP13.05□□□□□ -0.32
NEO1-205ENST00000558886 SRGNP10124 158 aa13.05□□□□□ -0.32
NEO1-205ENST00000558886 YBX3P16989 372 aaKnown RBP eCLIP13.05□□□□□ -0.32
NEO1-205ENST00000558886 FOXO4P98177 505 aa13.05□□□□□ -0.32
NEO1-205ENST00000558886 IFIT5Q13325 482 aaKnown RBP13.05□□□□□ -0.32
NEO1-205ENST00000558886 CCDC57Q2TAC2 916 aa13.05□□□□□ -0.32
NEO1-205ENST00000558886 EPHA10Q5JZY3 1008 aa13.05□□□□□ -0.32
NEO1-205ENST00000558886 STYK1Q6J9G0 422 aa13.05□□□□□ -0.32
NEO1-205ENST00000558886 C3orf67Q6ZVT6 689 aa13.05□□□□□ -0.32
NEO1-205ENST00000558886 TTLL11Q8NHH1 800 aa13.05□□□□□ -0.32
NEO1-205ENST00000558886 CNKSR1Q969H4 720 aa13.05□□□□□ -0.32
NEO1-205ENST00000558886 C1orf115Q9H7X2 142 aa13.05□□□□□ -0.32
NEO1-205ENST00000558886 PIM2Q9P1W9 311 aa13.05□□□□□ -0.32
NEO1-205ENST00000558886 WWC3Q9ULE0 1092 aa13.05□□□□□ -0.32
NEO1-205ENST00000558886 GRIN3BO60391 1043 aa13.04□□□□□ -0.32
NEO1-205ENST00000558886 CSF1RP07333 972 aa13.04□□□□□ -0.32
NEO1-205ENST00000558886 CDC5LQ99459 802 aaKnown RBP13.04□□□□□ -0.32
NEO1-205ENST00000558886 ZBTB40Q9NUA8 1239 aa13.04□□□□□ -0.32
NEO1-205ENST00000558886 NRXN2Q9P2S2 1712 aa13.04□□□□□ -0.32
NEO1-205ENST00000558886 RIC1Q4ADV7 1423 aa13.04□□□□□ -0.32
NEO1-205ENST00000558886 HOXA10P31260 410 aaPredicted RBP13.03□□□□□ -0.32
NEO1-205ENST00000558886 IGHMBP2P38935 993 aaKnown RBP13.03□□□□□ -0.32
NEO1-205ENST00000558886 AAMPQ13685 434 aa13.03□□□□□ -0.32
NEO1-205ENST00000558886 CRY2Q49AN0 593 aa13.03□□□□□ -0.32
NEO1-205ENST00000558886 ANKRD18AQ8IVF6 992 aa13.03□□□□□ -0.32
NEO1-205ENST00000558886 TTLL6Q8N841 843 aa13.03□□□□□ -0.32
NEO1-205ENST00000558886 ZNF784Q8NCA9 323 aaPredicted RBP13.03□□□□□ -0.32
NEO1-205ENST00000558886 EXOC6Q8TAG9 804 aa13.03□□□□□ -0.32
NEO1-205ENST00000558886 KAZALD1Q96I82 304 aa13.03□□□□□ -0.32
NEO1-205ENST00000558886 CRAMP1Q96RY5 1269 aa13.03□□□□□ -0.32
NEO1-205ENST00000558886 GREM2Q9H772 168 aa13.03□□□□□ -0.32
NEO1-205ENST00000558886 SRGAP3O43295 1099 aa13.02□□□□□ -0.33
NEO1-205ENST00000558886 BBOX1O75936 387 aa13.02□□□□□ -0.33
NEO1-205ENST00000558886 ITGA6P23229 1130 aa13.02□□□□□ -0.33
NEO1-205ENST00000558886 RPS8P62241 208 aaKnown RBP13.02□□□□□ -0.33
NEO1-205ENST00000558886 ATP8B2P98198 1209 aa13.02□□□□□ -0.33
NEO1-205ENST00000558886 FAM161AQ3B820 660 aa13.02□□□□□ -0.33
NEO1-205ENST00000558886 DALRD3Q5D0E6 543 aaKnown RBP13.02□□□□□ -0.33
NEO1-205ENST00000558886 ANKRD44Q8N8A2 993 aa13.02□□□□□ -0.33
NEO1-205ENST00000558886 MPHOSPH8Q99549 860 aa13.02□□□□□ -0.33
NEO1-205ENST00000558886 SEC31BQ9NQW1 1179 aa13.02□□□□□ -0.33
NEO1-205ENST00000558886 HMMRO75330 724 aa13.01□□□□□ -0.33
NEO1-205ENST00000558886 GRAPQ13588 217 aa13.01□□□□□ -0.33
NEO1-205ENST00000558886 RABL6Q3YEC7 729 aaPredicted RBP13.01□□□□□ -0.33
NEO1-205ENST00000558886 RPAP2Q8IXW5 612 aaPredicted RBP13.01□□□□□ -0.33
NEO1-205ENST00000558886 PIAS4Q8N2W9 510 aaPredicted RBP13.01□□□□□ -0.33
NEO1-205ENST00000558886 GRAPLQ8TC17 118 aaPredicted RBP13.01□□□□□ -0.33
NEO1-205ENST00000558886 ZNF219Q9P2Y4 722 aaPredicted RBP13.01□□□□□ -0.33
NEO1-205ENST00000558886 N4BP2Q86UW6 1770 aaPredicted RBP13.01□□□□□ -0.33
NEO1-205ENST00000558886 TMC4Q7Z404 712 aa13□□□□□ -0.33
NEO1-205ENST00000558886 CNNM1Q9NRU3 951 aa13□□□□□ -0.33
NEO1-205ENST00000558886 BCS1LQ9Y276 419 aa13□□□□□ -0.33
NEO1-205ENST00000558886 RTL9Q8NET4 1388 aa12.99□□□□□ -0.33
NEO1-205ENST00000558886 PPEF1O14829 653 aaPredicted RBP12.99□□□□□ -0.33
NEO1-205ENST00000558886 KCNA3P22001 575 aa12.99□□□□□ -0.33
NEO1-205ENST00000558886 PRPF40BQ6NWY9 871 aaKnown RBP12.99□□□□□ -0.33
NEO1-205ENST00000558886 CEP85Q6P2H3 762 aa12.99□□□□□ -0.33
NEO1-205ENST00000558886 LDHAL6AQ6ZMR3 332 aa12.99□□□□□ -0.33
NEO1-205ENST00000558886 CELF1Q92879 486 aaKnown RBP12.99□□□□□ -0.33
NEO1-205ENST00000558886 ZNF594Q96JF6 807 aaPredicted RBP12.99□□□□□ -0.33
NEO1-205ENST00000558886 DDX60Q8IY21 1712 aaKnown RBP12.99□□□□□ -0.33
NEO1-205ENST00000558886 UTRNP46939 3433 aa12.98□□□□□ -0.33
NEO1-205ENST00000558886 ANKRD31Q8N7Z5 1873 aa12.98□□□□□ -0.33
NEO1-205ENST00000558886 G3BP1Q13283 466 aaKnown RBP eCLIP12.98□□□□□ -0.33
NEO1-205ENST00000558886 OS9Q13438 667 aaPredicted RBP12.98□□□□□ -0.33
NEO1-205ENST00000558886 MTX1Q13505 466 aa12.98□□□□□ -0.33
NEO1-205ENST00000558886 MYH3P11055 1940 aa12.98□□□□□ -0.33
NEO1-205ENST00000558886 TNRC6CQ9HCJ0 1690 aaKnown RBP12.97□□□□□ -0.33
NEO1-205ENST00000558886 PNMA6EA0A0J9YXQ4 647 aa12.97□□□□□ -0.33
NEO1-205ENST00000558886 C21orf2O43822 256 aa12.97□□□□□ -0.33
NEO1-205ENST00000558886 SOGA3Q5TF21 947 aa12.97□□□□□ -0.33
NEO1-205ENST00000558886 CC2D2BQ6DHV5 1058 aa12.97□□□□□ -0.33
NEO1-205ENST00000558886 SP8Q8IXZ3 490 aa12.97□□□□□ -0.33
NEO1-205ENST00000558886 BSDC1Q9NW68 430 aaPredicted RBP12.97□□□□□ -0.33
NEO1-205ENST00000558886 KIF13BQ9NQT8 1826 aa12.97□□□□□ -0.33
NEO1-205ENST00000558886 LAMB2P55268 1798 aa12.97□□□□□ -0.33
NEO1-205ENST00000558886 SURF6O75683 361 aaKnown RBP12.96□□□□□ -0.33
NEO1-205ENST00000558886 KLHDC4Q8TBB5 520 aa12.96□□□□□ -0.33
NEO1-205ENST00000558886 SSH3Q8TE77 659 aa12.96□□□□□ -0.33
NEO1-205ENST00000558886 ANKRD2Q9GZV1 360 aa12.96□□□□□ -0.33
NEO1-205ENST00000558886 SIL1Q9H173 461 aa12.96□□□□□ -0.33
NEO1-205ENST00000558886 RWDD1Q9H446 243 aaPredicted RBP12.96□□□□□ -0.33
NEO1-205ENST00000558886 ANKIB1Q9P2G1 1089 aa12.96□□□□□ -0.33
NEO1-205ENST00000558886 ATP6V0A2Q9Y487 856 aa12.96□□□□□ -0.33
NEO1-205ENST00000558886 EYA2O00167 538 aa12.95□□□□□ -0.34
NEO1-205ENST00000558886 RFX5P48382 616 aaPredicted RBP12.95□□□□□ -0.34
NEO1-205ENST00000558886 PTPN12Q05209 780 aaKnown RBP12.95□□□□□ -0.34
NEO1-205ENST00000558886 POLA2Q14181 598 aa12.95□□□□□ -0.34
NEO1-205ENST00000558886 GRIPAP1Q4V328 841 aa12.95□□□□□ -0.34
NEO1-205ENST00000558886 HSP90AB4PQ58FF6 505 aa12.95□□□□□ -0.34
NEO1-205ENST00000558886 COPRSQ9NQ92 184 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms