RNA–Protein interactions for RNA: ENST00000558639.5

PSMA4-208, Transcript of proteasome subunit alpha 4, humanhuman

TSL 3

Gene PSMA4, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-208ENST00000558639 CENPJQ9HC77 1338 aaPredicted RBP10.65□□□□□ -0.7
PSMA4-208ENST00000558639 USP17L15C9J2P7 530 aa10.65□□□□□ -0.7
PSMA4-208ENST00000558639 USP17L10C9JJH3 530 aa10.65□□□□□ -0.7
PSMA4-208ENST00000558639 USP17L13C9JLJ4 530 aa10.65□□□□□ -0.7
PSMA4-208ENST00000558639 USP17L12C9JPN9 530 aa10.65□□□□□ -0.7
PSMA4-208ENST00000558639 USP17L11C9JVI0 530 aa10.65□□□□□ -0.7
PSMA4-208ENST00000558639 USP17L21D6R901 530 aa10.65□□□□□ -0.7
PSMA4-208ENST00000558639 USP17L18D6R9N7 530 aa10.65□□□□□ -0.7
PSMA4-208ENST00000558639 USP17L22D6RA61 530 aa10.65□□□□□ -0.7
PSMA4-208ENST00000558639 USP17L17D6RBQ6 530 aa10.65□□□□□ -0.7
PSMA4-208ENST00000558639 USP17L19D6RCP7 530 aa10.65□□□□□ -0.7
PSMA4-208ENST00000558639 USP17L20D6RJB6 530 aa10.65□□□□□ -0.7
PSMA4-208ENST00000558639 APBA3O96018 575 aa10.65□□□□□ -0.7
PSMA4-208ENST00000558639 USP17L24Q0WX57 530 aa10.65□□□□□ -0.7
PSMA4-208ENST00000558639 EZH2Q15910 746 aaKnown RBP10.65□□□□□ -0.7
PSMA4-208ENST00000558639 TRPM3Q9HCF6 1732 aaPredicted RBP10.64□□□□□ -0.71
PSMA4-208ENST00000558639 R3HDM1Q15032 1099 aaKnown RBP10.64□□□□□ -0.71
PSMA4-208ENST00000558639 FAM196AQ6ZSG2 479 aa10.64□□□□□ -0.71
PSMA4-208ENST00000558639 OGFOD1Q8N543 542 aa10.64□□□□□ -0.71
PSMA4-208ENST00000558639 L3MBTL2Q969R5 705 aa10.64□□□□□ -0.71
PSMA4-208ENST00000558639 RBM19Q9Y4C8 960 aaKnown RBP10.64□□□□□ -0.71
PSMA4-208ENST00000558639 COL14A1Q05707 1796 aaKnown RBP10.64□□□□□ -0.71
PSMA4-208ENST00000558639 MYCP01106 439 aaPredicted RBP10.63□□□□□ -0.71
PSMA4-208ENST00000558639 GCP02774 474 aa10.63□□□□□ -0.71
PSMA4-208ENST00000558639 CRTC2Q53ET0 693 aaPredicted RBP10.63□□□□□ -0.71
PSMA4-208ENST00000558639 FAM200AQ8TCP9 573 aa10.63□□□□□ -0.71
PSMA4-208ENST00000558639 DNAAF2Q9NVR5 837 aaKnown RBP10.63□□□□□ -0.71
PSMA4-208ENST00000558639 ABCA3Q99758 1704 aa10.63□□□□□ -0.71
PSMA4-208ENST00000558639 ALS2Q96Q42 1657 aa10.63□□□□□ -0.71
PSMA4-208ENST00000558639 PATL2C9JE40 543 aaKnown RBP10.62□□□□□ -0.71
PSMA4-208ENST00000558639 PTK7Q13308 1070 aa10.62□□□□□ -0.71
PSMA4-208ENST00000558639 TCP11L2Q8N4U5 519 aa10.62□□□□□ -0.71
PSMA4-208ENST00000558639 CDK15Q96Q40 435 aa10.62□□□□□ -0.71
PSMA4-208ENST00000558639 PODXL2Q9NZ53 605 aa10.62□□□□□ -0.71
PSMA4-208ENST00000558639 PLA2G2EQ9NZK7 142 aa10.62□□□□□ -0.71
PSMA4-208ENST00000558639 POLR3AO14802 1390 aaPredicted RBP10.62□□□□□ -0.71
PSMA4-208ENST00000558639 ATP7BP35670 1465 aa10.61□□□□□ -0.71
PSMA4-208ENST00000558639 ARHGEF28Q8N1W1 1705 aaKnown RBP10.61□□□□□ -0.71
PSMA4-208ENST00000558639 PPIP5K1Q6PFW1 1433 aa10.61□□□□□ -0.71
PSMA4-208ENST00000558639 WNT7AO00755 349 aa10.61□□□□□ -0.71
PSMA4-208ENST00000558639 DHX9Q08211 1270 aaKnown RBP10.61□□□□□ -0.71
PSMA4-208ENST00000558639 INTS6LQ5JSJ4 861 aaKnown RBP10.61□□□□□ -0.71
PSMA4-208ENST00000558639 LARGE2Q8N3Y3 721 aa10.61□□□□□ -0.71
PSMA4-208ENST00000558639 MPNDQ8N594 471 aa10.61□□□□□ -0.71
PSMA4-208ENST00000558639 ZNF594Q96JF6 807 aaPredicted RBP10.61□□□□□ -0.71
PSMA4-208ENST00000558639 CDCA7Q9BWT1 371 aaPredicted RBP10.61□□□□□ -0.71
PSMA4-208ENST00000558639 TMEM88BA6NKF7 163 aa10.6□□□□□ -0.71
PSMA4-208ENST00000558639 BRD1O95696 1058 aa10.6□□□□□ -0.71
PSMA4-208ENST00000558639 GTF2IP78347 998 aa10.6□□□□□ -0.71
PSMA4-208ENST00000558639 TOM1L2Q6ZVM7 507 aa10.6□□□□□ -0.71
PSMA4-208ENST00000558639 ANKMY2Q8IV38 441 aa10.6□□□□□ -0.71
PSMA4-208ENST00000558639 ZMIZ1Q9ULJ6 1067 aa10.6□□□□□ -0.71
PSMA4-208ENST00000558639 ITSN1Q15811 1721 aa10.6□□□□□ -0.71
PSMA4-208ENST00000558639 NRAPQ86VF7 1730 aa10.6□□□□□ -0.71
PSMA4-208ENST00000558639 EVC2Q86UK5 1308 aa10.59□□□□□ -0.71
PSMA4-208ENST00000558639 ERVH48-1M5A8F1 160 aa10.59□□□□□ -0.71
PSMA4-208ENST00000558639 FSHRP23945 695 aa10.59□□□□□ -0.71
PSMA4-208ENST00000558639 CLDN10P78369 228 aa10.59□□□□□ -0.71
PSMA4-208ENST00000558639 TMEM164Q5U3C3 297 aa10.59□□□□□ -0.71
PSMA4-208ENST00000558639 B4GALNT3Q6L9W6 998 aa10.59□□□□□ -0.71
PSMA4-208ENST00000558639 STK32AQ8WU08 396 aa10.59□□□□□ -0.71
PSMA4-208ENST00000558639 EMID1Q96A84 441 aaPredicted RBP10.59□□□□□ -0.71
PSMA4-208ENST00000558639 CAMKK2Q96RR4 588 aa10.59□□□□□ -0.71
PSMA4-208ENST00000558639 CARNS1A5YM72 827 aa10.58□□□□□ -0.72
PSMA4-208ENST00000558639 SPRYD7Q5W111 196 aa10.58□□□□□ -0.72
PSMA4-208ENST00000558639 MRGPRX2Q96LB1 330 aa10.58□□□□□ -0.72
PSMA4-208ENST00000558639 THRAP3Q9Y2W1 955 aaKnown RBP10.58□□□□□ -0.72
PSMA4-208ENST00000558639 TLL2Q9Y6L7 1015 aa10.58□□□□□ -0.72
PSMA4-208ENST00000558639 SSH2Q76I76 1423 aa10.58□□□□□ -0.72
PSMA4-208ENST00000558639 SIAH2O43255 324 aa10.57□□□□□ -0.72
PSMA4-208ENST00000558639 ADH1CP00326 375 aa10.57□□□□□ -0.72
PSMA4-208ENST00000558639 DPYDQ12882 1025 aa10.57□□□□□ -0.72
PSMA4-208ENST00000558639 NR5A1Q13285 461 aa10.57□□□□□ -0.72
PSMA4-208ENST00000558639 CAMTA1Q9Y6Y1 1673 aa10.57□□□□□ -0.72
PSMA4-208ENST00000558639 ROCK2O75116 1388 aaKnown RBP10.56□□□□□ -0.72
PSMA4-208ENST00000558639 GRM5P41594 1212 aa10.56□□□□□ -0.72
PSMA4-208ENST00000558639 DDB1Q16531 1140 aa10.56□□□□□ -0.72
PSMA4-208ENST00000558639 ZNF697Q5TEC3 545 aa10.56□□□□□ -0.72
PSMA4-208ENST00000558639 CCDC102BQ68D86 513 aa10.56□□□□□ -0.72
PSMA4-208ENST00000558639 SIX5Q8N196 739 aa10.56□□□□□ -0.72
PSMA4-208ENST00000558639 TMC1Q8TDI8 760 aa10.56□□□□□ -0.72
PSMA4-208ENST00000558639 USP19O94966 1318 aa10.56□□□□□ -0.72
PSMA4-208ENST00000558639 KIAA1210Q9ULL0 1709 aa10.55□□□□□ -0.72
PSMA4-208ENST00000558639 KCNA1Q09470 495 aa10.55□□□□□ -0.72
PSMA4-208ENST00000558639 CC2D2BQ6DHV5 1058 aa10.55□□□□□ -0.72
PSMA4-208ENST00000558639 ZNF598Q86UK7 904 aaKnown RBP10.55□□□□□ -0.72
PSMA4-208ENST00000558639 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.55□□□□□ -0.72
PSMA4-208ENST00000558639 CCDC116Q8IYX3 515 aa10.55□□□□□ -0.72
PSMA4-208ENST00000558639 KCNH5Q8NCM2 988 aa10.55□□□□□ -0.72
PSMA4-208ENST00000558639 TPCN2Q8NHX9 752 aa10.55□□□□□ -0.72
PSMA4-208ENST00000558639 PCDHGA11Q9Y5H2 935 aa10.55□□□□□ -0.72
PSMA4-208ENST00000558639 CPDO75976 1380 aa10.54□□□□□ -0.72
PSMA4-208ENST00000558639 ZBTB7BO15156 539 aaPredicted RBP10.54□□□□□ -0.72
PSMA4-208ENST00000558639 RGPD1P0DJD0 1748 aa10.54□□□□□ -0.72
PSMA4-208ENST00000558639 SEC13P55735 322 aa10.54□□□□□ -0.72
PSMA4-208ENST00000558639 CRYBG1Q9Y4K1 1723 aa10.54□□□□□ -0.72
PSMA4-208ENST00000558639 V9GY48 417 aaPredicted RBP10.54□□□□□ -0.72
PSMA4-208ENST00000558639 PHRF1Q9P1Y6 1649 aaKnown RBP10.54□□□□□ -0.72
PSMA4-208ENST00000558639 TTC21BQ7Z4L5 1316 aa10.54□□□□□ -0.72
PSMA4-208ENST00000558639 BRD4O60885 1362 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms