RNA–Protein interactions for RNA: ENST00000558635.1

PSMA4-207, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-207ENST00000558635 API5Q9BZZ5 524 aaKnown RBP13.19□□□□□ -0.3
PSMA4-207ENST00000558635 FHDC1Q9C0D6 1143 aaPredicted RBP13.19□□□□□ -0.3
PSMA4-207ENST00000558635 NYXQ9GZU5 481 aa13.19□□□□□ -0.3
PSMA4-207ENST00000558635 TRMT112Q9UI30 125 aaKnown RBP13.19□□□□□ -0.3
PSMA4-207ENST00000558635 LRP5O75197 1615 aa13.19□□□□□ -0.3
PSMA4-207ENST00000558635 ARFGEF2Q9Y6D5 1785 aa13.19□□□□□ -0.3
PSMA4-207ENST00000558635 NEURL1BA8MQ27 555 aa13.18□□□□□ -0.3
PSMA4-207ENST00000558635 IPO8O15397 1037 aaKnown RBP13.18□□□□□ -0.3
PSMA4-207ENST00000558635 ST5P78524 1137 aa13.18□□□□□ -0.3
PSMA4-207ENST00000558635 ERFEQ4G0M1 354 aa13.18□□□□□ -0.3
PSMA4-207ENST00000558635 LINS1Q8NG48 757 aa13.18□□□□□ -0.3
PSMA4-207ENST00000558635 ARHGAP45Q92619 1136 aa13.18□□□□□ -0.3
PSMA4-207ENST00000558635 CWC25Q9NXE8 425 aaPredicted RBP13.18□□□□□ -0.3
PSMA4-207ENST00000558635 CD2APQ9Y5K6 639 aa13.18□□□□□ -0.3
PSMA4-207ENST00000558635 IBTKQ9P2D0 1353 aaPredicted RBP13.18□□□□□ -0.3
PSMA4-207ENST00000558635 C10orf71Q711Q0 1435 aa13.17□□□□□ -0.3
PSMA4-207ENST00000558635 ZKSCAN2Q63HK3 967 aa13.17□□□□□ -0.3
PSMA4-207ENST00000558635 SYNE4Q8N205 404 aa13.17□□□□□ -0.3
PSMA4-207ENST00000558635 TNNQ9UQP3 1299 aa13.17□□□□□ -0.3
PSMA4-207ENST00000558635 TRIM27P14373 513 aa13.16□□□□□ -0.3
PSMA4-207ENST00000558635 GCKRQ14397 625 aa13.16□□□□□ -0.3
PSMA4-207ENST00000558635 RTL5Q5HYW3 569 aaPredicted RBP13.16□□□□□ -0.3
PSMA4-207ENST00000558635 ATF7IPQ6VMQ6 1270 aa13.16□□□□□ -0.3
PSMA4-207ENST00000558635 JARID2Q92833 1246 aaPredicted RBP13.16□□□□□ -0.3
PSMA4-207ENST00000558635 FAM89AQ96GI7 184 aa13.16□□□□□ -0.3
PSMA4-207ENST00000558635 SYT17Q9BSW7 474 aa13.16□□□□□ -0.3
PSMA4-207ENST00000558635 BRIP1Q9BX63 1249 aa13.16□□□□□ -0.3
PSMA4-207ENST00000558635 SRCIN1Q9C0H9 1055 aa13.16□□□□□ -0.3
PSMA4-207ENST00000558635 NRXN2Q9P2S2 1712 aa13.16□□□□□ -0.3
PSMA4-207ENST00000558635 AFDNP55196 1824 aaKnown RBP13.16□□□□□ -0.3
PSMA4-207ENST00000558635 RNF123Q5XPI4 1314 aa13.15□□□□□ -0.3
PSMA4-207ENST00000558635 SH3TC1Q8TE82 1336 aa13.15□□□□□ -0.3
PSMA4-207ENST00000558635 ANKRD36CQ5JPF3 1778 aa13.15□□□□□ -0.3
PSMA4-207ENST00000558635 RIOK3O14730 519 aaKnown RBP13.15□□□□□ -0.3
PSMA4-207ENST00000558635 ALDH1L1O75891 902 aa13.15□□□□□ -0.3
PSMA4-207ENST00000558635 PCCAP05165 728 aaPredicted RBP13.15□□□□□ -0.3
PSMA4-207ENST00000558635 HCLS1P14317 486 aaPredicted RBP13.15□□□□□ -0.3
PSMA4-207ENST00000558635 SLC10A5Q5PT55 438 aa13.15□□□□□ -0.3
PSMA4-207ENST00000558635 ZBTB38Q8NAP3 1195 aaPredicted RBP13.15□□□□□ -0.3
PSMA4-207ENST00000558635 NLGN2Q8NFZ4 835 aa13.15□□□□□ -0.3
PSMA4-207ENST00000558635 CLUAP1Q96AJ1 413 aa13.15□□□□□ -0.3
PSMA4-207ENST00000558635 ABCC12Q96J65 1359 aa13.15□□□□□ -0.3
PSMA4-207ENST00000558635 A0A0G2JLW4 131 aa13.14□□□□□ -0.31
PSMA4-207ENST00000558635 PDE6BP35913 854 aa13.14□□□□□ -0.31
PSMA4-207ENST00000558635 TGFB2P61812 414 aa13.14□□□□□ -0.31
PSMA4-207ENST00000558635 ABCC4O15439 1325 aa13.13□□□□□ -0.31
PSMA4-207ENST00000558635 H7C1W4 665 aa13.13□□□□□ -0.31
PSMA4-207ENST00000558635 IRS4O14654 1257 aaPredicted RBP13.13□□□□□ -0.31
PSMA4-207ENST00000558635 PLIN1O60240 522 aa13.13□□□□□ -0.31
PSMA4-207ENST00000558635 DPEP1P16444 411 aa13.13□□□□□ -0.31
PSMA4-207ENST00000558635 CHRNA5P30532 468 aa13.13□□□□□ -0.31
PSMA4-207ENST00000558635 CCT4P50991 539 aaKnown RBP13.13□□□□□ -0.31
PSMA4-207ENST00000558635 C3orf67Q6ZVT6 689 aa13.13□□□□□ -0.31
PSMA4-207ENST00000558635 C2CD5Q86YS7 1000 aa13.13□□□□□ -0.31
PSMA4-207ENST00000558635 RNF25Q96BH1 459 aaPredicted RBP13.13□□□□□ -0.31
PSMA4-207ENST00000558635 PXDNLA1KZ92 1463 aa13.12□□□□□ -0.31
PSMA4-207ENST00000558635 KLRG2A4D1S0 409 aaPredicted RBP13.12□□□□□ -0.31
PSMA4-207ENST00000558635 H0YIN7 160 aa13.12□□□□□ -0.31
PSMA4-207ENST00000558635 CASP7P55210 303 aa13.12□□□□□ -0.31
PSMA4-207ENST00000558635 INTS3Q68E01 1043 aaKnown RBP13.12□□□□□ -0.31
PSMA4-207ENST00000558635 UBE3BQ7Z3V4 1068 aa13.12□□□□□ -0.31
PSMA4-207ENST00000558635 NLRP3Q96P20 1036 aa13.12□□□□□ -0.31
PSMA4-207ENST00000558635 C9orf78Q9NZ63 289 aaPredicted RBP13.12□□□□□ -0.31
PSMA4-207ENST00000558635 GRM8O00222 908 aa13.11□□□□□ -0.31
PSMA4-207ENST00000558635 RLBP1P12271 317 aa13.11□□□□□ -0.31
PSMA4-207ENST00000558635 KCNA3P22001 575 aa13.11□□□□□ -0.31
PSMA4-207ENST00000558635 FTSJ3Q8IY81 847 aaKnown RBP13.11□□□□□ -0.31
PSMA4-207ENST00000558635 DZIP1LQ8IYY4 767 aaKnown RBP13.11□□□□□ -0.31
PSMA4-207ENST00000558635 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.11□□□□□ -0.31
PSMA4-207ENST00000558635 PDZRN3Q9UPQ7 1066 aa13.11□□□□□ -0.31
PSMA4-207ENST00000558635 RIC1Q4ADV7 1423 aa13.11□□□□□ -0.31
PSMA4-207ENST00000558635 CDHR2Q9BYE9 1310 aa13.11□□□□□ -0.31
PSMA4-207ENST00000558635 PDE8AO60658 829 aa13.1□□□□□ -0.31
PSMA4-207ENST00000558635 SRGNP10124 158 aa13.1□□□□□ -0.31
PSMA4-207ENST00000558635 HSP90B1P14625 803 aaKnown RBP13.1□□□□□ -0.31
PSMA4-207ENST00000558635 TMEM57Q8N5G2 664 aa13.1□□□□□ -0.31
PSMA4-207ENST00000558635 PDCD7Q8N8D1 485 aaKnown RBP13.1□□□□□ -0.31
PSMA4-207ENST00000558635 PANK1Q8TE04 598 aa13.1□□□□□ -0.31
PSMA4-207ENST00000558635 USP44Q9H0E7 712 aa13.1□□□□□ -0.31
PSMA4-207ENST00000558635 WWC3Q9ULE0 1092 aa13.1□□□□□ -0.31
PSMA4-207ENST00000558635 KIF13BQ9NQT8 1826 aa13.1□□□□□ -0.31
PSMA4-207ENST00000558635 NBPF7P0C2Y1 421 aaPredicted RBP13.09□□□□□ -0.31
PSMA4-207ENST00000558635 MS4A1P11836 297 aa13.09□□□□□ -0.31
PSMA4-207ENST00000558635 NPR1P16066 1061 aa13.09□□□□□ -0.31
PSMA4-207ENST00000558635 CRY2Q49AN0 593 aa13.09□□□□□ -0.31
PSMA4-207ENST00000558635 ANKRD31Q8N7Z5 1873 aa13.09□□□□□ -0.31
PSMA4-207ENST00000558635 ZNF622Q969S3 477 aaKnown RBP eCLIP13.09□□□□□ -0.31
PSMA4-207ENST00000558635 MASTLQ96GX5 879 aa13.09□□□□□ -0.31
PSMA4-207ENST00000558635 UTYO14607 1347 aa13.09□□□□□ -0.31
PSMA4-207ENST00000558635 SF3B3Q15393 1217 aaKnown RBP13.08□□□□□ -0.32
PSMA4-207ENST00000558635 STYK1Q6J9G0 422 aa13.08□□□□□ -0.32
PSMA4-207ENST00000558635 RPGRQ92834 1020 aaKnown RBP13.08□□□□□ -0.32
PSMA4-207ENST00000558635 PLA2G12BQ9BX93 195 aa13.08□□□□□ -0.32
PSMA4-207ENST00000558635 PIM2Q9P1W9 311 aa13.08□□□□□ -0.32
PSMA4-207ENST00000558635 TNRC6CQ9HCJ0 1690 aaKnown RBP13.08□□□□□ -0.32
PSMA4-207ENST00000558635 ECM2O94769 699 aaPredicted RBP13.07□□□□□ -0.32
PSMA4-207ENST00000558635 HOXA10P31260 410 aaPredicted RBP13.07□□□□□ -0.32
PSMA4-207ENST00000558635 RRP1P56182 461 aaKnown RBP13.07□□□□□ -0.32
PSMA4-207ENST00000558635 CTSWP56202 376 aa13.07□□□□□ -0.32
PSMA4-207ENST00000558635 C20orf194Q5TEA3 1177 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms