RNA–Protein interactions for RNA: ENST00000558545.1

COPS2-204, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 2

Gene COPS2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-204ENST00000558545 TRPM4Q8TD43 1214 aa9.54□□□□□ -0.88
COPS2-204ENST00000558545 PLVAPQ9BX97 442 aa9.54□□□□□ -0.88
COPS2-204ENST00000558545 FAM13BQ9NYF5 915 aa9.54□□□□□ -0.88
COPS2-204ENST00000558545 XYLBO75191 536 aa9.53□□□□□ -0.88
COPS2-204ENST00000558545 RARAP10276 462 aa9.53□□□□□ -0.88
COPS2-204ENST00000558545 NID1P14543 1247 aa9.53□□□□□ -0.88
COPS2-204ENST00000558545 TARSP26639 723 aaKnown RBP9.53□□□□□ -0.88
COPS2-204ENST00000558545 SSFA2P28290 1259 aa9.53□□□□□ -0.88
COPS2-204ENST00000558545 ABTB2Q8N961 1025 aa9.53□□□□□ -0.88
COPS2-204ENST00000558545 USP20Q9Y2K6 914 aa9.53□□□□□ -0.88
COPS2-204ENST00000558545 SASH3O75995 380 aa9.52□□□□□ -0.89
COPS2-204ENST00000558545 SPATA31C1P0DKV0 1188 aa9.52□□□□□ -0.89
COPS2-204ENST00000558545 GPLD1P80108 840 aa9.52□□□□□ -0.89
COPS2-204ENST00000558545 TBC1D8BQ0IIM8 1120 aa9.52□□□□□ -0.89
COPS2-204ENST00000558545 KRT25Q7Z3Z0 450 aa9.52□□□□□ -0.89
COPS2-204ENST00000558545 CMTR1Q8N1G2 835 aaKnown RBP9.52□□□□□ -0.89
COPS2-204ENST00000558545 SEPT3Q9UH03 358 aa9.52□□□□□ -0.89
COPS2-204ENST00000558545 NAGPAQ9UK23 515 aa9.52□□□□□ -0.89
COPS2-204ENST00000558545 MSTNO14793 375 aa9.51□□□□□ -0.89
COPS2-204ENST00000558545 LILRB5O75023 590 aa9.51□□□□□ -0.89
COPS2-204ENST00000558545 HOXD8P13378 290 aaPredicted RBP9.51□□□□□ -0.89
COPS2-204ENST00000558545 ARID4AP29374 1257 aaPredicted RBP9.51□□□□□ -0.89
COPS2-204ENST00000558545 NRLP54845 237 aa9.51□□□□□ -0.89
COPS2-204ENST00000558545 C8orf86Q6ZUL3 223 aa9.51□□□□□ -0.89
COPS2-204ENST00000558545 HELQQ8TDG4 1101 aa9.51□□□□□ -0.89
COPS2-204ENST00000558545 PIK3R5Q8WYR1 880 aa9.51□□□□□ -0.89
COPS2-204ENST00000558545 SPOCK3Q9BQ16 436 aa9.51□□□□□ -0.89
COPS2-204ENST00000558545 IGFLR1Q9H665 355 aa9.51□□□□□ -0.89
COPS2-204ENST00000558545 FRRS1LQ9P0K9 344 aa9.51□□□□□ -0.89
COPS2-204ENST00000558545 PROCP04070 461 aa9.5□□□□□ -0.89
COPS2-204ENST00000558545 ZAP70P43403 619 aa9.5□□□□□ -0.89
COPS2-204ENST00000558545 TRIP4Q15650 581 aaPredicted RBP9.5□□□□□ -0.89
COPS2-204ENST00000558545 TLR7Q9NYK1 1049 aaKnown RBP9.5□□□□□ -0.89
COPS2-204ENST00000558545 LOC100996750A0A140TA64 210 aa9.49□□□□□ -0.89
COPS2-204ENST00000558545 ZBTB42B2RXF5 422 aa9.49□□□□□ -0.89
COPS2-204ENST00000558545 SOX18P35713 384 aa9.49□□□□□ -0.89
COPS2-204ENST00000558545 PSAPL1Q6NUJ1 521 aa9.49□□□□□ -0.89
COPS2-204ENST00000558545 ILDR2Q71H61 639 aa9.49□□□□□ -0.89
COPS2-204ENST00000558545 KRTAP4-6Q9BYQ5 205 aa9.49□□□□□ -0.89
COPS2-204ENST00000558545 USTQ9Y2C2 406 aa9.49□□□□□ -0.89
COPS2-204ENST00000558545 SUZ12Q15022 739 aaKnown RBP9.48□□□□□ -0.89
COPS2-204ENST00000558545 FAM35AQ86V20 835 aa9.48□□□□□ -0.89
COPS2-204ENST00000558545 TTC9Q92623 222 aa9.48□□□□□ -0.89
COPS2-204ENST00000558545 JPH1Q9HDC5 661 aaPredicted RBP9.48□□□□□ -0.89
COPS2-204ENST00000558545 ZBTB39O15060 712 aa9.47□□□□□ -0.89
COPS2-204ENST00000558545 AFF1P51825 1210 aaKnown RBP9.47□□□□□ -0.89
COPS2-204ENST00000558545 PRRT3Q5FWE3 981 aa9.47□□□□□ -0.89
COPS2-204ENST00000558545 NLRP13Q86W25 1043 aa9.47□□□□□ -0.89
COPS2-204ENST00000558545 LPIN3Q9BQK8 851 aa9.47□□□□□ -0.89
COPS2-204ENST00000558545 RGS9O75916 674 aaPredicted RBP9.46□□□□□ -0.9
COPS2-204ENST00000558545 PLAURQ03405 335 aa9.46□□□□□ -0.9
COPS2-204ENST00000558545 PHLDB3Q6NSJ2 640 aa9.46□□□□□ -0.9
COPS2-204ENST00000558545 CD163Q86VB7 1156 aa9.46□□□□□ -0.9
COPS2-204ENST00000558545 NUDT8Q8WV74 236 aa9.46□□□□□ -0.9
COPS2-204ENST00000558545 FNDC3AQ9Y2H6 1198 aaKnown RBP9.46□□□□□ -0.9
COPS2-204ENST00000558545 C1QTNF9BB2RNN3 333 aa9.45□□□□□ -0.9
COPS2-204ENST00000558545 UBAP1LF5GYI3 381 aa9.45□□□□□ -0.9
COPS2-204ENST00000558545 MMP20O60882 483 aa9.45□□□□□ -0.9
COPS2-204ENST00000558545 PSAPP07602 524 aa9.45□□□□□ -0.9
COPS2-204ENST00000558545 CPB1P15086 417 aa9.45□□□□□ -0.9
COPS2-204ENST00000558545 PERM1Q5SV97 790 aa9.45□□□□□ -0.9
COPS2-204ENST00000558545 SCNN1AP37088 669 aa9.44□□□□□ -0.9
COPS2-204ENST00000558545 CHRNA4P43681 627 aa9.44□□□□□ -0.9
COPS2-204ENST00000558545 TRIM28Q13263 835 aaKnown RBP9.44□□□□□ -0.9
COPS2-204ENST00000558545 GRIK5Q16478 980 aa9.44□□□□□ -0.9
COPS2-204ENST00000558545 ELMSAN1Q6PJG2 1045 aa9.44□□□□□ -0.9
COPS2-204ENST00000558545 GPR152Q8TDT2 470 aa9.44□□□□□ -0.9
COPS2-204ENST00000558545 GTF3C2Q8WUA4 911 aaPredicted RBP9.44□□□□□ -0.9
COPS2-204ENST00000558545 TIMELESSQ9UNS1 1208 aa9.44□□□□□ -0.9
COPS2-204ENST00000558545 NPR3P17342 541 aa9.43□□□□□ -0.9
COPS2-204ENST00000558545 MTMR7Q9Y216 660 aa9.43□□□□□ -0.9
COPS2-204ENST00000558545 A0A0A0MRY4 1105 aa9.42□□□□□ -0.9
COPS2-204ENST00000558545 LOC102724428A0A0B4J2F2 783 aa9.42□□□□□ -0.9
COPS2-204ENST00000558545 RPLP1P05386 114 aaKnown RBP9.42□□□□□ -0.9
COPS2-204ENST00000558545 SIK1P57059 783 aa9.42□□□□□ -0.9
COPS2-204ENST00000558545 MLLT1Q03111 559 aaPredicted RBP9.42□□□□□ -0.9
COPS2-204ENST00000558545 TRAPPC3LQ5T215 181 aa9.42□□□□□ -0.9
COPS2-204ENST00000558545 OR13H1Q8NG92 308 aa9.42□□□□□ -0.9
COPS2-204ENST00000558545 SUPT5HO00267 1087 aaKnown RBP9.41□□□□□ -0.9
COPS2-204ENST00000558545 NOM1Q5C9Z4 860 aaKnown RBP9.41□□□□□ -0.9
COPS2-204ENST00000558545 MSL1Q68DK7 614 aa9.41□□□□□ -0.9
COPS2-204ENST00000558545 PDE12Q6L8Q7 609 aaKnown RBP9.41□□□□□ -0.9
COPS2-204ENST00000558545 B4GALNT3Q6L9W6 998 aa9.41□□□□□ -0.9
COPS2-204ENST00000558545 DTWD1Q8N5C7 304 aa9.41□□□□□ -0.9
COPS2-204ENST00000558545 NACC1Q96RE7 527 aa9.41□□□□□ -0.9
COPS2-204ENST00000558545 CARNS1A5YM72 827 aa9.4□□□□□ -0.9
COPS2-204ENST00000558545 ELNP15502 786 aa9.4□□□□□ -0.9
COPS2-204ENST00000558545 EIF2AK2P19525 551 aaKnown RBP9.4□□□□□ -0.9
COPS2-204ENST00000558545 XKR5Q6UX68 686 aa9.4□□□□□ -0.9
COPS2-204ENST00000558545 ATCAYQ86WG3 371 aa9.4□□□□□ -0.9
COPS2-204ENST00000558545 NUDT16Q96DE0 195 aaKnown RBP9.4□□□□□ -0.9
COPS2-204ENST00000558545 SMG9Q9H0W8 520 aaKnown RBP9.4□□□□□ -0.9
COPS2-204ENST00000558545 FAM229AH3BQW9 127 aa9.39□□□□□ -0.91
COPS2-204ENST00000558545 APBA3O96018 575 aa9.39□□□□□ -0.91
COPS2-204ENST00000558545 MPSTP25325 297 aa9.39□□□□□ -0.91
COPS2-204ENST00000558545 BAG6P46379 1132 aa9.39□□□□□ -0.91
COPS2-204ENST00000558545 EIF1AXP47813 144 aaKnown RBP9.39□□□□□ -0.91
COPS2-204ENST00000558545 RAC1P63000 192 aa9.39□□□□□ -0.91
COPS2-204ENST00000558545 SF3B2Q13435 895 aaKnown RBP9.39□□□□□ -0.91
COPS2-204ENST00000558545 ALKBH2Q6NS38 261 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms