RNA–Protein interactions for RNA: ENST00000558488.1

RNF213-206, Transcript of ring finger protein 213, humanhuman

TSL 3

Gene RNF213, Length 526 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-206ENST00000558488 NPHP1O15259 732 aa22.47■■□□□ 1.19
RNF213-206ENST00000558488 NUTM1Q86Y26 1132 aa22.47■■□□□ 1.19
RNF213-206ENST00000558488 KAZALD1Q96I82 304 aa22.47■■□□□ 1.19
RNF213-206ENST00000558488 RTL5Q5HYW3 569 aaPredicted RBP22.46■■□□□ 1.19
RNF213-206ENST00000558488 RPAP2Q8IXW5 612 aaPredicted RBP22.46■■□□□ 1.19
RNF213-206ENST00000558488 C10orf71Q711Q0 1435 aa22.46■■□□□ 1.19
RNF213-206ENST00000558488 CTSWP56202 376 aa22.45■■□□□ 1.18
RNF213-206ENST00000558488 FOXO4P98177 505 aa22.45■■□□□ 1.18
RNF213-206ENST00000558488 BICC1Q9H694 974 aaKnown RBP22.45■■□□□ 1.18
RNF213-206ENST00000558488 RTL9Q8NET4 1388 aa22.45■■□□□ 1.18
RNF213-206ENST00000558488 WDR90Q96KV7 1748 aa22.45■■□□□ 1.18
RNF213-206ENST00000558488 CSF1RP07333 972 aa22.44■■□□□ 1.18
RNF213-206ENST00000558488 CEP85Q6P2H3 762 aa22.44■■□□□ 1.18
RNF213-206ENST00000558488 SYNE4Q8N205 404 aa22.44■■□□□ 1.18
RNF213-206ENST00000558488 ANKRD44Q8N8A2 993 aa22.44■■□□□ 1.18
RNF213-206ENST00000558488 JARID2Q92833 1246 aaPredicted RBP22.44■■□□□ 1.18
RNF213-206ENST00000558488 BRIP1Q9BX63 1249 aa22.44■■□□□ 1.18
RNF213-206ENST00000558488 KIAA1551Q9HCM1 1747 aa22.44■■□□□ 1.18
RNF213-206ENST00000558488 HCLS1P14317 486 aaPredicted RBP22.43■■□□□ 1.18
RNF213-206ENST00000558488 SF3B3Q15393 1217 aaKnown RBP22.43■■□□□ 1.18
RNF213-206ENST00000558488 COL13A1Q5TAT6 717 aaPredicted RBP22.43■■□□□ 1.18
RNF213-206ENST00000558488 NLRP3Q96P20 1036 aa22.43■■□□□ 1.18
RNF213-206ENST00000558488 C1orf115Q9H7X2 142 aa22.43■■□□□ 1.18
RNF213-206ENST00000558488 PDZRN3Q9UPQ7 1066 aa22.43■■□□□ 1.18
RNF213-206ENST00000558488 MYH3P11055 1940 aa22.43■■□□□ 1.18
RNF213-206ENST00000558488 TNRC6CQ9HCJ0 1690 aaKnown RBP22.42■■□□□ 1.18
RNF213-206ENST00000558488 KLRG2A4D1S0 409 aaPredicted RBP22.42■■□□□ 1.18
RNF213-206ENST00000558488 HTRA3P83110 453 aa22.42■■□□□ 1.18
RNF213-206ENST00000558488 EPHA10Q5JZY3 1008 aa22.42■■□□□ 1.18
RNF213-206ENST00000558488 APLP1P51693 650 aa22.41■■□□□ 1.18
RNF213-206ENST00000558488 ATP8B2P98198 1209 aa22.41■■□□□ 1.18
RNF213-206ENST00000558488 CRY2Q49AN0 593 aa22.41■■□□□ 1.18
RNF213-206ENST00000558488 CCDC152Q4G0S7 254 aa22.41■■□□□ 1.18
RNF213-206ENST00000558488 TTLL11Q8NHH1 800 aa22.41■■□□□ 1.18
RNF213-206ENST00000558488 HMMRO75330 724 aa22.4■■□□□ 1.18
RNF213-206ENST00000558488 PDE6BP35913 854 aa22.4■■□□□ 1.18
RNF213-206ENST00000558488 LMBR1LQ6UX01 489 aa22.4■■□□□ 1.18
RNF213-206ENST00000558488 PCDHB15Q9Y5E8 787 aa22.4■■□□□ 1.18
RNF213-206ENST00000558488 ANKRD31Q8N7Z5 1873 aa22.39■■□□□ 1.18
RNF213-206ENST00000558488 KIF13BQ9NQT8 1826 aa22.39■■□□□ 1.17
RNF213-206ENST00000558488 CAPN15O75808 1086 aa22.39■■□□□ 1.17
RNF213-206ENST00000558488 SSH3Q8TE77 659 aa22.39■■□□□ 1.17
RNF213-206ENST00000558488 HDAC1Q13547 482 aaPredicted RBP22.38■■□□□ 1.17
RNF213-206ENST00000558488 POLA2Q14181 598 aa22.38■■□□□ 1.17
RNF213-206ENST00000558488 SRGAP3O43295 1099 aa22.37■■□□□ 1.17
RNF213-206ENST00000558488 FAM161AQ3B820 660 aa22.36■■□□□ 1.17
RNF213-206ENST00000558488 SIRT2Q8IXJ6 389 aa22.36■■□□□ 1.17
RNF213-206ENST00000558488 CCDC24Q8N4L8 307 aa22.36■■□□□ 1.17
RNF213-206ENST00000558488 NMRK2Q9NPI5 230 aa22.36■■□□□ 1.17
RNF213-206ENST00000558488 PNMA6EA0A0J9YXQ4 647 aa22.35■■□□□ 1.17
RNF213-206ENST00000558488 IFIT5Q13325 482 aaKnown RBP22.35■■□□□ 1.17
RNF213-206ENST00000558488 CCDC57Q2TAC2 916 aa22.35■■□□□ 1.17
RNF213-206ENST00000558488 C3orf67Q6ZVT6 689 aa22.35■■□□□ 1.17
RNF213-206ENST00000558488 GREM2Q9H772 168 aa22.35■■□□□ 1.17
RNF213-206ENST00000558488 PPP4R2Q9NY27 417 aa22.35■■□□□ 1.17
RNF213-206ENST00000558488 ANKRD18BA2A2Z9 1011 aa22.34■■□□□ 1.17
RNF213-206ENST00000558488 HOXA10P31260 410 aaPredicted RBP22.34■■□□□ 1.17
RNF213-206ENST00000558488 CDC5LQ99459 802 aaKnown RBP22.34■■□□□ 1.17
RNF213-206ENST00000558488 RWDD1Q9H446 243 aaPredicted RBP22.34■■□□□ 1.17
RNF213-206ENST00000558488 FBXO3Q9UK99 471 aa22.34■■□□□ 1.17
RNF213-206ENST00000558488 CHMP3Q9Y3E7 222 aa22.34■■□□□ 1.17
RNF213-206ENST00000558488 TOMM70O94826 608 aa22.33■■□□□ 1.17
RNF213-206ENST00000558488 NPR1P16066 1061 aa22.33■■□□□ 1.17
RNF213-206ENST00000558488 ITGA6P23229 1130 aa22.33■■□□□ 1.17
RNF213-206ENST00000558488 RFX5P48382 616 aaPredicted RBP22.33■■□□□ 1.17
RNF213-206ENST00000558488 RPGRQ92834 1020 aaKnown RBP22.33■■□□□ 1.17
RNF213-206ENST00000558488 COPRSQ9NQ92 184 aa22.33■■□□□ 1.17
RNF213-206ENST00000558488 BRCA1P38398 1863 aaKnown RBP22.32■■□□□ 1.16
RNF213-206ENST00000558488 COL11A2P13942 1736 aaPredicted RBP22.32■■□□□ 1.16
RNF213-206ENST00000558488 SRGNP10124 158 aa22.32■■□□□ 1.16
RNF213-206ENST00000558488 TGFB2P61812 414 aa22.32■■□□□ 1.16
RNF213-206ENST00000558488 DDX46Q7L014 1031 aaKnown RBP22.32■■□□□ 1.16
RNF213-206ENST00000558488 CRAMP1Q96RY5 1269 aa22.32■■□□□ 1.16
RNF213-206ENST00000558488 STYK1Q6J9G0 422 aa22.31■■□□□ 1.16
RNF213-206ENST00000558488 MASTLQ96GX5 879 aa22.31■■□□□ 1.16
RNF213-206ENST00000558488 RBM17Q96I25 401 aaKnown RBP22.31■■□□□ 1.16
RNF213-206ENST00000558488 NOP58Q9Y2X3 529 aaKnown RBP22.31■■□□□ 1.16
RNF213-206ENST00000558488 DLEC1Q9Y238 1755 aa22.3■■□□□ 1.16
RNF213-206ENST00000558488 H0YIN7 160 aa22.3■■□□□ 1.16
RNF213-206ENST00000558488 PTPN12Q05209 780 aaKnown RBP22.3■■□□□ 1.16
RNF213-206ENST00000558488 C2CD5Q86YS7 1000 aa22.3■■□□□ 1.16
RNF213-206ENST00000558488 CIAO1O76071 339 aa22.29■■□□□ 1.16
RNF213-206ENST00000558488 GRAPQ13588 217 aa22.29■■□□□ 1.16
RNF213-206ENST00000558488 HSP90AB4PQ58FF6 505 aa22.29■■□□□ 1.16
RNF213-206ENST00000558488 TAF7LQ5H9L4 462 aa22.29■■□□□ 1.16
RNF213-206ENST00000558488 GRAPLQ8TC17 118 aaPredicted RBP22.29■■□□□ 1.16
RNF213-206ENST00000558488 CCDC85AQ96PX6 553 aaPredicted RBP22.29■■□□□ 1.16
RNF213-206ENST00000558488 ALDH1B1P30837 517 aa22.28■■□□□ 1.16
RNF213-206ENST00000558488 IGHMBP2P38935 993 aaKnown RBP22.28■■□□□ 1.16
RNF213-206ENST00000558488 TMC4Q7Z404 712 aa22.28■■□□□ 1.16
RNF213-206ENST00000558488 ANKRD18AQ8IVF6 992 aa22.28■■□□□ 1.16
RNF213-206ENST00000558488 GCC1Q96CN9 775 aa22.28■■□□□ 1.16
RNF213-206ENST00000558488 CCDC136Q96JN2 1154 aa22.28■■□□□ 1.16
RNF213-206ENST00000558488 DCTPP1Q9H773 170 aa22.28■■□□□ 1.16
RNF213-206ENST00000558488 JMYQ8N9B5 988 aa22.27■■□□□ 1.16
RNF213-206ENST00000558488 KLRG1Q96E93 195 aa22.27■■□□□ 1.16
RNF213-206ENST00000558488 SEC31BQ9NQW1 1179 aa22.27■■□□□ 1.16
RNF213-206ENST00000558488 RPS8P62241 208 aaKnown RBP22.26■■□□□ 1.15
RNF213-206ENST00000558488 ERC1Q8IUD2 1116 aa22.26■■□□□ 1.15
RNF213-206ENST00000558488 SMC5Q8IY18 1101 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms