RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 ERC1Q8IUD2 1116 aa18.46■□□□□ 0.55
VPS18-202ENST00000558474 SYNE4Q8N205 404 aa18.46■□□□□ 0.55
VPS18-202ENST00000558474 NLRP3Q96P20 1036 aa18.45■□□□□ 0.54
VPS18-202ENST00000558474 PARP3Q9Y6F1 533 aa18.45■□□□□ 0.54
VPS18-202ENST00000558474 NPHP1O15259 732 aa18.44■□□□□ 0.54
VPS18-202ENST00000558474 SURF6O75683 361 aaKnown RBP18.44■□□□□ 0.54
VPS18-202ENST00000558474 HCLS1P14317 486 aaPredicted RBP18.44■□□□□ 0.54
VPS18-202ENST00000558474 NUCB1Q02818 461 aa18.44■□□□□ 0.54
VPS18-202ENST00000558474 PTPN12Q05209 780 aaKnown RBP18.44■□□□□ 0.54
VPS18-202ENST00000558474 DDR1Q08345 913 aa18.44■□□□□ 0.54
VPS18-202ENST00000558474 IFIT5Q13325 482 aaKnown RBP18.44■□□□□ 0.54
VPS18-202ENST00000558474 PRR5LQ6MZQ0 368 aa18.44■□□□□ 0.54
VPS18-202ENST00000558474 ANKRD18BA2A2Z9 1011 aa18.43■□□□□ 0.54
VPS18-202ENST00000558474 ZBTB47Q9UFB7 747 aaPredicted RBP18.43■□□□□ 0.54
VPS18-202ENST00000558474 CHMP3Q9Y3E7 222 aa18.43■□□□□ 0.54
VPS18-202ENST00000558474 ABCC12Q96J65 1359 aa18.42■□□□□ 0.54
VPS18-202ENST00000558474 CIAO1O76071 339 aa18.42■□□□□ 0.54
VPS18-202ENST00000558474 MMP10P09238 476 aa18.42■□□□□ 0.54
VPS18-202ENST00000558474 G3BP1Q13283 466 aaKnown RBP eCLIP18.42■□□□□ 0.54
VPS18-202ENST00000558474 ILDR2Q71H61 639 aa18.42■□□□□ 0.54
VPS18-202ENST00000558474 KIF1BPQ96EK5 621 aa18.42■□□□□ 0.54
VPS18-202ENST00000558474 KLRG2A4D1S0 409 aaPredicted RBP18.41■□□□□ 0.54
VPS18-202ENST00000558474 ITGA6P23229 1130 aa18.41■□□□□ 0.54
VPS18-202ENST00000558474 FAM161AQ3B820 660 aa18.41■□□□□ 0.54
VPS18-202ENST00000558474 CHD1LQ86WJ1 897 aa18.41■□□□□ 0.54
VPS18-202ENST00000558474 LRRCC1Q9C099 1032 aa18.41■□□□□ 0.54
VPS18-202ENST00000558474 GREM2Q9H772 168 aa18.41■□□□□ 0.54
VPS18-202ENST00000558474 PDZRN3Q9UPQ7 1066 aa18.41■□□□□ 0.54
VPS18-202ENST00000558474 EXOC6BQ9Y2D4 811 aa18.41■□□□□ 0.54
VPS18-202ENST00000558474 ANKRD45Q5TZF3 282 aa18.4■□□□□ 0.54
VPS18-202ENST00000558474 CDC5LQ99459 802 aaKnown RBP18.4■□□□□ 0.54
VPS18-202ENST00000558474 BRIP1Q9BX63 1249 aa18.4■□□□□ 0.54
VPS18-202ENST00000558474 LRP5O75197 1615 aa18.4■□□□□ 0.54
VPS18-202ENST00000558474 TNRC6CQ9HCJ0 1690 aaKnown RBP18.4■□□□□ 0.54
VPS18-202ENST00000558474 IL15P40933 162 aaPredicted RBP18.39■□□□□ 0.53
VPS18-202ENST00000558474 CRY2Q49AN0 593 aa18.39■□□□□ 0.53
VPS18-202ENST00000558474 TAF7LQ5H9L4 462 aa18.39■□□□□ 0.53
VPS18-202ENST00000558474 ANKRD31Q8N7Z5 1873 aa18.38■□□□□ 0.53
VPS18-202ENST00000558474 EYA2O00167 538 aa18.38■□□□□ 0.53
VPS18-202ENST00000558474 OS9Q13438 667 aaPredicted RBP18.38■□□□□ 0.53
VPS18-202ENST00000558474 RHPN1Q8TCX5 695 aa18.38■□□□□ 0.53
VPS18-202ENST00000558474 MTFR1LQ9H019 292 aa18.38■□□□□ 0.53
VPS18-202ENST00000558474 PA2G4Q9UQ80 394 aaKnown RBP18.38■□□□□ 0.53
VPS18-202ENST00000558474 PDE6BP35913 854 aa18.37■□□□□ 0.53
VPS18-202ENST00000558474 IGHMBP2P38935 993 aaKnown RBP18.36■□□□□ 0.53
VPS18-202ENST00000558474 MSL1Q68DK7 614 aa18.36■□□□□ 0.53
VPS18-202ENST00000558474 DDX46Q7L014 1031 aaKnown RBP18.36■□□□□ 0.53
VPS18-202ENST00000558474 GPR108Q9NPR9 543 aa18.36■□□□□ 0.53
VPS18-202ENST00000558474 SASH1O94885 1247 aa18.35■□□□□ 0.53
VPS18-202ENST00000558474 HOXA10P31260 410 aaPredicted RBP18.35■□□□□ 0.53
VPS18-202ENST00000558474 R3HDM1Q15032 1099 aaKnown RBP18.35■□□□□ 0.53
VPS18-202ENST00000558474 LDHAL6AQ6ZMR3 332 aa18.35■□□□□ 0.53
VPS18-202ENST00000558474 C3orf67Q6ZVT6 689 aa18.35■□□□□ 0.53
VPS18-202ENST00000558474 ATG9AQ7Z3C6 839 aa18.35■□□□□ 0.53
VPS18-202ENST00000558474 CLASRPQ8N2M8 674 aaKnown RBP18.35■□□□□ 0.53
VPS18-202ENST00000558474 KLHDC4Q8TBB5 520 aa18.35■□□□□ 0.53
VPS18-202ENST00000558474 CCDC85AQ96PX6 553 aaPredicted RBP18.35■□□□□ 0.53
VPS18-202ENST00000558474 MPHOSPH8Q99549 860 aa18.35■□□□□ 0.53
VPS18-202ENST00000558474 MROH5Q6ZUA9 1318 aa18.34■□□□□ 0.53
VPS18-202ENST00000558474 POLD1P28340 1107 aa18.34■□□□□ 0.53
VPS18-202ENST00000558474 ANKRD18AQ8IVF6 992 aa18.34■□□□□ 0.53
VPS18-202ENST00000558474 RPGRQ92834 1020 aaKnown RBP18.34■□□□□ 0.53
VPS18-202ENST00000558474 RBM17Q96I25 401 aaKnown RBP18.34■□□□□ 0.53
VPS18-202ENST00000558474 LNPKQ9C0E8 428 aa18.34■□□□□ 0.53
VPS18-202ENST00000558474 PDGFDQ9GZP0 370 aaPredicted RBP18.34■□□□□ 0.53
VPS18-202ENST00000558474 SIL1Q9H173 461 aa18.34■□□□□ 0.53
VPS18-202ENST00000558474 RIPOR2Q9Y4F9 1068 aa18.34■□□□□ 0.53
VPS18-202ENST00000558474 KIF13BQ9NQT8 1826 aa18.34■□□□□ 0.53
VPS18-202ENST00000558474 TMC4Q7Z404 712 aa18.33■□□□□ 0.52
VPS18-202ENST00000558474 PELP1Q8IZL8 1130 aaKnown RBP18.33■□□□□ 0.52
VPS18-202ENST00000558474 ZNF594Q96JF6 807 aaPredicted RBP18.33■□□□□ 0.52
VPS18-202ENST00000558474 CRAMP1Q96RY5 1269 aa18.33■□□□□ 0.52
VPS18-202ENST00000558474 SEC31BQ9NQW1 1179 aa18.33■□□□□ 0.52
VPS18-202ENST00000558474 CNNM1Q9NRU3 951 aa18.33■□□□□ 0.52
VPS18-202ENST00000558474 BSDC1Q9NW68 430 aaPredicted RBP18.33■□□□□ 0.52
VPS18-202ENST00000558474 SPEF2Q9C093 1822 aa18.33■□□□□ 0.52
VPS18-202ENST00000558474 RPS8P62241 208 aaKnown RBP18.32■□□□□ 0.52
VPS18-202ENST00000558474 GRAPQ13588 217 aa18.32■□□□□ 0.52
VPS18-202ENST00000558474 GRAPLQ8TC17 118 aaPredicted RBP18.32■□□□□ 0.52
VPS18-202ENST00000558474 CEP126Q9P2H0 1117 aa18.32■□□□□ 0.52
VPS18-202ENST00000558474 AKAP2Q9Y2D5 859 aa18.32■□□□□ 0.52
VPS18-202ENST00000558474 C10orf71Q711Q0 1435 aa18.32■□□□□ 0.52
VPS18-202ENST00000558474 APBB1O00213 710 aa18.31■□□□□ 0.52
VPS18-202ENST00000558474 NPR1P16066 1061 aa18.31■□□□□ 0.52
VPS18-202ENST00000558474 LRRC24Q50LG9 513 aa18.31■□□□□ 0.52
VPS18-202ENST00000558474 CCDC24Q8N4L8 307 aa18.31■□□□□ 0.52
VPS18-202ENST00000558474 OSBPL3Q9H4L5 887 aa18.31■□□□□ 0.52
VPS18-202ENST00000558474 SMARCA5O60264 1052 aaPredicted RBP18.3■□□□□ 0.52
VPS18-202ENST00000558474 BBOX1O75936 387 aa18.3■□□□□ 0.52
VPS18-202ENST00000558474 SRGNP10124 158 aa18.3■□□□□ 0.52
VPS18-202ENST00000558474 PDE4AP27815 886 aa18.3■□□□□ 0.52
VPS18-202ENST00000558474 ALDH1B1P30837 517 aa18.3■□□□□ 0.52
VPS18-202ENST00000558474 MASTLQ96GX5 879 aa18.3■□□□□ 0.52
VPS18-202ENST00000558474 PUS3Q9BZE2 481 aaKnown RBP18.3■□□□□ 0.52
VPS18-202ENST00000558474 A0A1B0GUL6 1792 aa18.3■□□□□ 0.52
VPS18-202ENST00000558474 AOX1Q06278 1338 aa18.29■□□□□ 0.52
VPS18-202ENST00000558474 SALL3Q9BXA9 1300 aa18.29■□□□□ 0.52
VPS18-202ENST00000558474 TFCP2Q12800 502 aa18.29■□□□□ 0.52
VPS18-202ENST00000558474 METTL24Q5JXM2 366 aa18.29■□□□□ 0.52
VPS18-202ENST00000558474 IL1RAPL2Q9NP60 686 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms