RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 SOX11P35716 441 aa9.12□□□□□ -0.95
ZEB1-211ENST00000558440 USP4Q13107 963 aa9.12□□□□□ -0.95
ZEB1-211ENST00000558440 NBPF10Q6P3W6 841 aaKnown RBP9.12□□□□□ -0.95
ZEB1-211ENST00000558440 NBPF15Q8N660 670 aa9.12□□□□□ -0.95
ZEB1-211ENST00000558440 DYRK1BQ9Y463 629 aa9.12□□□□□ -0.95
ZEB1-211ENST00000558440 HRH3Q9Y5N1 445 aa9.12□□□□□ -0.95
ZEB1-211ENST00000558440 PPLO60437 1756 aa9.12□□□□□ -0.95
ZEB1-211ENST00000558440 WDR44Q5JSH3 913 aa9.11□□□□□ -0.95
ZEB1-211ENST00000558440 TMEM151AQ8N4L1 468 aa9.11□□□□□ -0.95
ZEB1-211ENST00000558440 ORAI2Q96SN7 254 aa9.11□□□□□ -0.95
ZEB1-211ENST00000558440 ATRNO75882 1429 aa9.11□□□□□ -0.95
ZEB1-211ENST00000558440 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.11□□□□□ -0.95
ZEB1-211ENST00000558440 BRWD3Q6RI45 1802 aa9.1□□□□□ -0.95
ZEB1-211ENST00000558440 WASLO00401 505 aaPredicted RBP9.1□□□□□ -0.95
ZEB1-211ENST00000558440 GSK3AP49840 483 aa9.1□□□□□ -0.95
ZEB1-211ENST00000558440 CENPCQ03188 943 aa9.1□□□□□ -0.95
ZEB1-211ENST00000558440 SEMA3FQ13275 785 aa9.1□□□□□ -0.95
ZEB1-211ENST00000558440 OXLD1Q5BKU9 147 aa9.1□□□□□ -0.95
ZEB1-211ENST00000558440 TRIM22Q8IYM9 498 aa9.1□□□□□ -0.95
ZEB1-211ENST00000558440 FNBP4Q8N3X1 1017 aaPredicted RBP9.1□□□□□ -0.95
ZEB1-211ENST00000558440 ZNF837Q96EG3 531 aaPredicted RBP9.1□□□□□ -0.95
ZEB1-211ENST00000558440 XAGE2Q96GT9 111 aa9.1□□□□□ -0.95
ZEB1-211ENST00000558440 GMCL1Q96IK5 515 aa9.1□□□□□ -0.95
ZEB1-211ENST00000558440 ROBO2Q9HCK4 1378 aa9.1□□□□□ -0.95
ZEB1-211ENST00000558440 CDC42BPGQ6DT37 1551 aa9.09□□□□□ -0.95
ZEB1-211ENST00000558440 HFM1A2PYH4 1435 aa9.09□□□□□ -0.95
ZEB1-211ENST00000558440 MAP7D1Q3KQU3 841 aa9.09□□□□□ -0.95
ZEB1-211ENST00000558440 ESCO1Q5FWF5 840 aa9.09□□□□□ -0.95
ZEB1-211ENST00000558440 TAS1R3Q7RTX0 852 aa9.09□□□□□ -0.95
ZEB1-211ENST00000558440 SIRT1Q96EB6 747 aa9.09□□□□□ -0.95
ZEB1-211ENST00000558440 MYOM2P54296 1465 aa9.08□□□□□ -0.96
ZEB1-211ENST00000558440 NPHP3Q7Z494 1330 aa9.08□□□□□ -0.96
ZEB1-211ENST00000558440 GDF11O95390 407 aa9.08□□□□□ -0.96
ZEB1-211ENST00000558440 RIPOR1Q6ZS17 1223 aa9.08□□□□□ -0.96
ZEB1-211ENST00000558440 PLPP7Q8NBV4 271 aa9.08□□□□□ -0.96
ZEB1-211ENST00000558440 FHDC1Q9C0D6 1143 aaPredicted RBP9.08□□□□□ -0.96
ZEB1-211ENST00000558440 PRAG1Q86YV5 1406 aa9.07□□□□□ -0.96
ZEB1-211ENST00000558440 SLURP2P0DP57 97 aa9.07□□□□□ -0.96
ZEB1-211ENST00000558440 GAS6Q14393 721 aa9.07□□□□□ -0.96
ZEB1-211ENST00000558440 DBN1Q16643 649 aa9.07□□□□□ -0.96
ZEB1-211ENST00000558440 POM121Q96HA1 1249 aa9.07□□□□□ -0.96
ZEB1-211ENST00000558440 ZSCAN10Q96SZ4 725 aaPredicted RBP9.07□□□□□ -0.96
ZEB1-211ENST00000558440 GAS2L1Q99501 681 aaPredicted RBP9.07□□□□□ -0.96
ZEB1-211ENST00000558440 TIMMDC1Q9NPL8 285 aa9.07□□□□□ -0.96
ZEB1-211ENST00000558440 H7C1W4 665 aa9.06□□□□□ -0.96
ZEB1-211ENST00000558440 RASSF7Q02833 373 aa9.06□□□□□ -0.96
ZEB1-211ENST00000558440 FLIIQ13045 1269 aa9.06□□□□□ -0.96
ZEB1-211ENST00000558440 ZNF385CQ66K41 422 aaPredicted RBP9.06□□□□□ -0.96
ZEB1-211ENST00000558440 ETNK1Q9HBU6 452 aa9.06□□□□□ -0.96
ZEB1-211ENST00000558440 LRPPRCP42704 1394 aaKnown RBP9.06□□□□□ -0.96
ZEB1-211ENST00000558440 BCL9LQ86UU0 1499 aa9.06□□□□□ -0.96
ZEB1-211ENST00000558440 PXDNQ92626 1479 aa9.06□□□□□ -0.96
ZEB1-211ENST00000558440 KIF1AQ12756 1690 aa9.06□□□□□ -0.96
ZEB1-211ENST00000558440 RGPD8O14715 1765 aaPredicted RBP9.06□□□□□ -0.96
ZEB1-211ENST00000558440 RPGRIP1LQ68CZ1 1315 aa9.05□□□□□ -0.96
ZEB1-211ENST00000558440 RNF225M0QZC1 329 aaPredicted RBP9.05□□□□□ -0.96
ZEB1-211ENST00000558440 STAU1O95793 577 aaKnown RBP9.05□□□□□ -0.96
ZEB1-211ENST00000558440 WWC1Q8IX03 1113 aa9.05□□□□□ -0.96
ZEB1-211ENST00000558440 KNDC1Q76NI1 1749 aa9.05□□□□□ -0.96
ZEB1-211ENST00000558440 FMN2Q9NZ56 1722 aa9.05□□□□□ -0.96
ZEB1-211ENST00000558440 GLI3P10071 1580 aa9.04□□□□□ -0.96
ZEB1-211ENST00000558440 FOXO3O43524 673 aa9.04□□□□□ -0.96
ZEB1-211ENST00000558440 RAD21O60216 631 aa9.04□□□□□ -0.96
ZEB1-211ENST00000558440 F11P03951 625 aa9.04□□□□□ -0.96
ZEB1-211ENST00000558440 SCNN1DP51172 638 aa9.04□□□□□ -0.96
ZEB1-211ENST00000558440 XPCQ01831 940 aaPredicted RBP9.04□□□□□ -0.96
ZEB1-211ENST00000558440 GNASQ5JWF2 1037 aa9.04□□□□□ -0.96
ZEB1-211ENST00000558440 FOXR1Q6PIV2 292 aa9.04□□□□□ -0.96
ZEB1-211ENST00000558440 IFT172Q9UG01 1749 aa9.04□□□□□ -0.96
ZEB1-211ENST00000558440 USP32Q8NFA0 1604 aa9.04□□□□□ -0.96
ZEB1-211ENST00000558440 BLMP54132 1417 aaPredicted RBP9.04□□□□□ -0.96
ZEB1-211ENST00000558440 PLCH1Q4KWH8 1693 aa9.04□□□□□ -0.96
ZEB1-211ENST00000558440 RALGAPBQ86X10 1494 aa9.03□□□□□ -0.96
ZEB1-211ENST00000558440 NWD2Q9ULI1 1742 aa9.03□□□□□ -0.96
ZEB1-211ENST00000558440 PIK3CDO00329 1044 aa9.03□□□□□ -0.96
ZEB1-211ENST00000558440 GTF2E1P29083 439 aaPredicted RBP9.03□□□□□ -0.96
ZEB1-211ENST00000558440 SRSF11Q05519 484 aaKnown RBP9.03□□□□□ -0.96
ZEB1-211ENST00000558440 SF3B2Q13435 895 aaKnown RBP9.03□□□□□ -0.96
ZEB1-211ENST00000558440 TMEM214Q6NUQ4 689 aaKnown RBP9.03□□□□□ -0.96
ZEB1-211ENST00000558440 SVOPQ8N4V2 548 aa9.03□□□□□ -0.96
ZEB1-211ENST00000558440 GTPBP3Q969Y2 492 aaKnown RBP9.03□□□□□ -0.96
ZEB1-211ENST00000558440 ALG2Q9H553 416 aa9.03□□□□□ -0.96
ZEB1-211ENST00000558440 NAIPQ13075 1403 aa9.03□□□□□ -0.96
ZEB1-211ENST00000558440 LRP5O75197 1615 aa9.02□□□□□ -0.96
ZEB1-211ENST00000558440 A0A1B0GTH6 734 aa9.02□□□□□ -0.97
ZEB1-211ENST00000558440 GPR25O00155 361 aa9.02□□□□□ -0.97
ZEB1-211ENST00000558440 PHKA2P46019 1235 aa9.02□□□□□ -0.97
ZEB1-211ENST00000558440 GDF10P55107 478 aa9.02□□□□□ -0.97
ZEB1-211ENST00000558440 TLR1Q15399 786 aa9.02□□□□□ -0.97
ZEB1-211ENST00000558440 C4orf17Q53FE4 359 aa9.02□□□□□ -0.97
ZEB1-211ENST00000558440 PPARGC1BQ86YN6 1023 aaKnown RBP9.02□□□□□ -0.97
ZEB1-211ENST00000558440 UNC5CLQ8IV45 518 aa9.02□□□□□ -0.97
ZEB1-211ENST00000558440 WHAMMQ8TF30 809 aa9.02□□□□□ -0.97
ZEB1-211ENST00000558440 ADAMTS8Q9UP79 889 aa9.02□□□□□ -0.97
ZEB1-211ENST00000558440 ABCA3Q99758 1704 aa9.02□□□□□ -0.97
ZEB1-211ENST00000558440 SLIT2O94813 1529 aa9.01□□□□□ -0.97
ZEB1-211ENST00000558440 CCDC144AA2RUR9 1427 aa9.01□□□□□ -0.97
ZEB1-211ENST00000558440 INHAP05111 366 aa9.01□□□□□ -0.97
ZEB1-211ENST00000558440 RHBDD1Q8TEB9 315 aa9.01□□□□□ -0.97
ZEB1-211ENST00000558440 NUCKS1Q9H1E3 243 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms