RNA–Protein interactions for RNA: ENST00000558240.1

CDK12-203, Transcript of cyclin dependent kinase 12, humanhuman

TSL 4

Gene CDK12, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-203ENST00000558240 BBOX1O75936 387 aa15.2■□□□□ 0.02
CDK12-203ENST00000558240 CCDC152Q4G0S7 254 aa15.2■□□□□ 0.02
CDK12-203ENST00000558240 ZKSCAN2Q63HK3 967 aa15.2■□□□□ 0.02
CDK12-203ENST00000558240 ARHGAP27Q6ZUM4 889 aa15.2■□□□□ 0.02
CDK12-203ENST00000558240 FRAT1Q92837 279 aaPredicted RBP15.2■□□□□ 0.02
CDK12-203ENST00000558240 UTYO14607 1347 aa15.19■□□□□ 0.02
CDK12-203ENST00000558240 ABCC4O15439 1325 aa15.19■□□□□ 0.02
CDK12-203ENST00000558240 C21orf2O43822 256 aa15.19■□□□□ 0.02
CDK12-203ENST00000558240 TRIM27P14373 513 aa15.19■□□□□ 0.02
CDK12-203ENST00000558240 CTSWP56202 376 aa15.19■□□□□ 0.02
CDK12-203ENST00000558240 GRAPQ13588 217 aa15.19■□□□□ 0.02
CDK12-203ENST00000558240 GRAPLQ8TC17 118 aaPredicted RBP15.19■□□□□ 0.02
CDK12-203ENST00000558240 RCAN3Q9UKA8 241 aa15.19■□□□□ 0.02
CDK12-203ENST00000558240 INTS3Q68E01 1043 aaKnown RBP15.18■□□□□ 0.02
CDK12-203ENST00000558240 CC2D2BQ6DHV5 1058 aa15.18■□□□□ 0.02
CDK12-203ENST00000558240 TTLL11Q8NHH1 800 aa15.18■□□□□ 0.02
CDK12-203ENST00000558240 RTL9Q8NET4 1388 aa15.17■□□□□ 0.02
CDK12-203ENST00000558240 PPEF1O14829 653 aaPredicted RBP15.17■□□□□ 0.02
CDK12-203ENST00000558240 CSF1RP07333 972 aa15.17■□□□□ 0.02
CDK12-203ENST00000558240 GRIPAP1Q4V328 841 aa15.17■□□□□ 0.02
CDK12-203ENST00000558240 CCDC93Q567U6 631 aa15.17■□□□□ 0.02
CDK12-203ENST00000558240 TMC4Q7Z404 712 aa15.17■□□□□ 0.02
CDK12-203ENST00000558240 USP44Q9H0E7 712 aa15.17■□□□□ 0.02
CDK12-203ENST00000558240 DICER1Q9UPY3 1922 aaKnown RBP15.17■□□□□ 0.02
CDK12-203ENST00000558240 NBPF7P0C2Y1 421 aaPredicted RBP15.16■□□□□ 0.02
CDK12-203ENST00000558240 RPS8P62241 208 aaKnown RBP15.16■□□□□ 0.02
CDK12-203ENST00000558240 FOXO4P98177 505 aa15.16■□□□□ 0.02
CDK12-203ENST00000558240 RTKN2Q8IZC4 609 aa15.16■□□□□ 0.02
CDK12-203ENST00000558240 TMX4Q9H1E5 349 aaPredicted RBP15.16■□□□□ 0.02
CDK12-203ENST00000558240 ZNF219Q9P2Y4 722 aaPredicted RBP15.16■□□□□ 0.02
CDK12-203ENST00000558240 ATP6V0A2Q9Y487 856 aa15.16■□□□□ 0.02
CDK12-203ENST00000558240 SP8Q8IXZ3 490 aa15.15■□□□□ 0.02
CDK12-203ENST00000558240 CELF1Q92879 486 aaKnown RBP15.15■□□□□ 0.02
CDK12-203ENST00000558240 GREM2Q9H772 168 aa15.15■□□□□ 0.02
CDK12-203ENST00000558240 SEC31BQ9NQW1 1179 aa15.15■□□□□ 0.02
CDK12-203ENST00000558240 LTBP3Q9NS15 1303 aa15.15■□□□□ 0.02
CDK12-203ENST00000558240 NFKBIEO00221 500 aa15.14■□□□□ 0.01
CDK12-203ENST00000558240 DZIP1LQ8IYY4 767 aaKnown RBP15.14■□□□□ 0.01
CDK12-203ENST00000558240 CLUAP1Q96AJ1 413 aa15.14■□□□□ 0.01
CDK12-203ENST00000558240 SUCLG2Q96I99 432 aa15.14■□□□□ 0.01
CDK12-203ENST00000558240 CCDC85AQ96PX6 553 aaPredicted RBP15.14■□□□□ 0.01
CDK12-203ENST00000558240 CDC5LQ99459 802 aaKnown RBP15.14■□□□□ 0.01
CDK12-203ENST00000558240 HDAC5Q9UQL6 1122 aa15.14■□□□□ 0.01
CDK12-203ENST00000558240 TNNQ9UQP3 1299 aa15.14■□□□□ 0.01
CDK12-203ENST00000558240 SPEF2Q9C093 1822 aa15.14■□□□□ 0.01
CDK12-203ENST00000558240 LRRC37AA6NMS7 1700 aa15.14■□□□□ 0.01
CDK12-203ENST00000558240 MS4A1P11836 297 aa15.13■□□□□ 0.01
CDK12-203ENST00000558240 EPHA10Q5JZY3 1008 aa15.13■□□□□ 0.01
CDK12-203ENST00000558240 OLFM4Q6UX06 510 aa15.13■□□□□ 0.01
CDK12-203ENST00000558240 FTSJ3Q8IY81 847 aaKnown RBP15.13■□□□□ 0.01
CDK12-203ENST00000558240 SNED1Q8TER0 1413 aa15.13■□□□□ 0.01
CDK12-203ENST00000558240 KAZALD1Q96I82 304 aa15.13■□□□□ 0.01
CDK12-203ENST00000558240 TAOK3Q9H2K8 898 aa15.13■□□□□ 0.01
CDK12-203ENST00000558240 COL4A1P02462 1669 aa15.12■□□□□ 0.01
CDK12-203ENST00000558240 UBTFL1P0CB47 393 aaPredicted RBP15.12■□□□□ 0.01
CDK12-203ENST00000558240 LMNB1P20700 586 aa15.12■□□□□ 0.01
CDK12-203ENST00000558240 ITGA6P23229 1130 aa15.12■□□□□ 0.01
CDK12-203ENST00000558240 FKBP4Q02790 459 aaKnown RBP eCLIP15.12■□□□□ 0.01
CDK12-203ENST00000558240 RABL6Q3YEC7 729 aaPredicted RBP15.12■□□□□ 0.01
CDK12-203ENST00000558240 LMBR1LQ6UX01 489 aa15.12■□□□□ 0.01
CDK12-203ENST00000558240 ANKRD18AQ8IVF6 992 aa15.12■□□□□ 0.01
CDK12-203ENST00000558240 TMEM57Q8N5G2 664 aa15.12■□□□□ 0.01
CDK12-203ENST00000558240 PSMD1Q99460 953 aa15.12■□□□□ 0.01
CDK12-203ENST00000558240 ANKRD18BA2A2Z9 1011 aa15.11■□□□□ 0.01
CDK12-203ENST00000558240 GNAI3P08754 354 aa15.11■□□□□ 0.01
CDK12-203ENST00000558240 RASSF7Q02833 373 aa15.11■□□□□ 0.01
CDK12-203ENST00000558240 IFIT5Q13325 482 aaKnown RBP15.11■□□□□ 0.01
CDK12-203ENST00000558240 FAM161AQ3B820 660 aa15.11■□□□□ 0.01
CDK12-203ENST00000558240 BICC1Q9H694 974 aaKnown RBP15.11■□□□□ 0.01
CDK12-203ENST00000558240 IGHMBP2P38935 993 aaKnown RBP15.1■□□□□ 0.01
CDK12-203ENST00000558240 CCDC57Q2TAC2 916 aa15.1■□□□□ 0.01
CDK12-203ENST00000558240 C9orf131Q5VYM1 1079 aa15.1■□□□□ 0.01
CDK12-203ENST00000558240 MPNDQ8N594 471 aa15.1■□□□□ 0.01
CDK12-203ENST00000558240 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.1■□□□□ 0.01
CDK12-203ENST00000558240 BSDC1Q9NW68 430 aaPredicted RBP15.1■□□□□ 0.01
CDK12-203ENST00000558240 CHMP3Q9Y3E7 222 aa15.1■□□□□ 0.01
CDK12-203ENST00000558240 RLBP1P12271 317 aa15.09■□□□□ 0.01
CDK12-203ENST00000558240 YY1P25490 414 aa15.09■□□□□ 0.01
CDK12-203ENST00000558240 PRELPP51888 382 aa15.09■□□□□ 0.01
CDK12-203ENST00000558240 ANKRD44Q8N8A2 993 aa15.09■□□□□ 0.01
CDK12-203ENST00000558240 MEIS3Q99687 375 aa15.09■□□□□ 0.01
CDK12-203ENST00000558240 RTFDC1Q9BY42 306 aaPredicted RBP15.09■□□□□ 0.01
CDK12-203ENST00000558240 DPP8Q6V1X1 898 aaPredicted RBP15.08■□□□□ 0
CDK12-203ENST00000558240 SUPT20HQ8NEM7 779 aa15.08■□□□□ 0
CDK12-203ENST00000558240 MPHOSPH8Q99549 860 aa15.08■□□□□ 0
CDK12-203ENST00000558240 VPS33BQ9H267 617 aa15.08■□□□□ 0
CDK12-203ENST00000558240 PODXL2Q9NZ53 605 aa15.08■□□□□ 0
CDK12-203ENST00000558240 RNF181Q9P0P0 153 aa15.08■□□□□ 0
CDK12-203ENST00000558240 ZC3H4Q9UPT8 1303 aaKnown RBP15.08■□□□□ 0
CDK12-203ENST00000558240 LTBP1Q14766 1721 aa15.08■□□□□ 0
CDK12-203ENST00000558240 PLIN1O60240 522 aa15.07■□□□□ 0
CDK12-203ENST00000558240 PDE3AQ14432 1141 aa15.07■□□□□ 0
CDK12-203ENST00000558240 SLC51AQ86UW1 340 aa15.07■□□□□ 0
CDK12-203ENST00000558240 ITPRIPQ8IWB1 547 aa15.07■□□□□ 0
CDK12-203ENST00000558240 PANK1Q8TE04 598 aa15.07■□□□□ 0
CDK12-203ENST00000558240 ZNF277Q9NRM2 450 aaPredicted RBP15.07■□□□□ 0
CDK12-203ENST00000558240 NSFL1CQ9UNZ2 370 aaKnown RBP15.07■□□□□ 0
CDK12-203ENST00000558240 LRRFIP2Q9Y608 721 aaKnown RBP15.07■□□□□ 0
CDK12-203ENST00000558240 TIAM2Q8IVF5 1701 aa15.06■□□□□ 0
CDK12-203ENST00000558240 ZBTB7BO15156 539 aaPredicted RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms