RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 DRC7Q8IY82 874 aa12.76□□□□□ -0.37
SEMA4B-204ENST00000558065 SAAL1Q96ER3 474 aa12.76□□□□□ -0.37
SEMA4B-204ENST00000558065 TSGA10Q9BZW7 698 aa12.76□□□□□ -0.37
SEMA4B-204ENST00000558065 PDE11AQ9HCR9 933 aa12.76□□□□□ -0.37
SEMA4B-204ENST00000558065 ARFGAP3Q9NP61 516 aa12.76□□□□□ -0.37
SEMA4B-204ENST00000558065 HOMER3Q9NSC5 361 aa12.76□□□□□ -0.37
SEMA4B-204ENST00000558065 ZNF644Q9H582 1327 aaPredicted RBP12.76□□□□□ -0.37
SEMA4B-204ENST00000558065 MYO1FO00160 1098 aa12.76□□□□□ -0.37
SEMA4B-204ENST00000558065 MAP3K9P80192 1104 aa12.76□□□□□ -0.37
SEMA4B-204ENST00000558065 NUCB1Q02818 461 aa12.76□□□□□ -0.37
SEMA4B-204ENST00000558065 LAMB3Q13751 1172 aa12.76□□□□□ -0.37
SEMA4B-204ENST00000558065 MVPQ14764 893 aaKnown RBP12.76□□□□□ -0.37
SEMA4B-204ENST00000558065 SPTY2D1Q68D10 685 aaPredicted RBP12.76□□□□□ -0.37
SEMA4B-204ENST00000558065 FAM200AQ8TCP9 573 aa12.76□□□□□ -0.37
SEMA4B-204ENST00000558065 SPDL1Q96EA4 605 aa12.76□□□□□ -0.37
SEMA4B-204ENST00000558065 RBM17Q96I25 401 aaKnown RBP12.76□□□□□ -0.37
SEMA4B-204ENST00000558065 DISP1Q96F81 1524 aa12.76□□□□□ -0.37
SEMA4B-204ENST00000558065 POTEDQ86YR6 584 aa12.76□□□□□ -0.37
SEMA4B-204ENST00000558065 CNNM3Q8NE01 707 aa12.76□□□□□ -0.37
SEMA4B-204ENST00000558065 BICD1Q96G01 975 aa12.76□□□□□ -0.37
SEMA4B-204ENST00000558065 LARP6Q9BRS8 491 aaKnown RBP12.76□□□□□ -0.37
SEMA4B-204ENST00000558065 DDX20Q9UHI6 824 aaKnown RBP12.76□□□□□ -0.37
SEMA4B-204ENST00000558065 ST20-MTHFSA0A0A6YYL1 179 aa12.75□□□□□ -0.37
SEMA4B-204ENST00000558065 EFCAB8A8MWE9 144 aa12.75□□□□□ -0.37
SEMA4B-204ENST00000558065 PKD2Q13563 968 aa12.75□□□□□ -0.37
SEMA4B-204ENST00000558065 THEMIS2Q5TEJ8 643 aa12.75□□□□□ -0.37
SEMA4B-204ENST00000558065 LUZP1Q86V48 1076 aa12.75□□□□□ -0.37
SEMA4B-204ENST00000558065 MAB21L3Q8N8X9 362 aa12.75□□□□□ -0.37
SEMA4B-204ENST00000558065 BICD2Q8TD16 824 aa12.75□□□□□ -0.37
SEMA4B-204ENST00000558065 AKNAD1Q5T1N1 836 aa12.75□□□□□ -0.37
SEMA4B-204ENST00000558065 RCSD1Q6JBY9 416 aa12.75□□□□□ -0.37
SEMA4B-204ENST00000558065 B4GALNT2Q8NHY0 566 aa12.75□□□□□ -0.37
SEMA4B-204ENST00000558065 RPAP1Q9BWH6 1393 aaPredicted RBP12.75□□□□□ -0.37
SEMA4B-204ENST00000558065 SPDYE3A6NKU9 549 aa12.75□□□□□ -0.37
SEMA4B-204ENST00000558065 MCM6Q14566 821 aa12.75□□□□□ -0.37
SEMA4B-204ENST00000558065 TTLL7Q6ZT98 887 aa12.75□□□□□ -0.37
SEMA4B-204ENST00000558065 AMOTL1Q8IY63 956 aa12.75□□□□□ -0.37
SEMA4B-204ENST00000558065 PRAM1Q96QH2 718 aa12.75□□□□□ -0.37
SEMA4B-204ENST00000558065 EPAS1Q99814 870 aa12.74□□□□□ -0.37
SEMA4B-204ENST00000558065 PRDM15P57071 1507 aaPredicted RBP12.74□□□□□ -0.37
SEMA4B-204ENST00000558065 SLC8A3P57103 927 aa12.74□□□□□ -0.37
SEMA4B-204ENST00000558065 LONRF2Q1L5Z9 754 aa12.74□□□□□ -0.37
SEMA4B-204ENST00000558065 PHC3Q8NDX5 983 aa12.74□□□□□ -0.37
SEMA4B-204ENST00000558065 LMBR1Q8WVP7 490 aa12.74□□□□□ -0.37
SEMA4B-204ENST00000558065 JPH4Q96JJ6 628 aa12.74□□□□□ -0.37
SEMA4B-204ENST00000558065 UTP14AQ9BVJ6 771 aaKnown RBP12.74□□□□□ -0.37
SEMA4B-204ENST00000558065 LRRC10BA6NIK2 292 aa12.74□□□□□ -0.37
SEMA4B-204ENST00000558065 PES1O00541 588 aaKnown RBP12.74□□□□□ -0.37
SEMA4B-204ENST00000558065 RANBP1P43487 201 aa12.74□□□□□ -0.37
SEMA4B-204ENST00000558065 SNW1Q13573 536 aaKnown RBP12.74□□□□□ -0.37
SEMA4B-204ENST00000558065 AGAP3Q96P47 875 aa12.74□□□□□ -0.37
SEMA4B-204ENST00000558065 CLTCL1P53675 1640 aa12.73□□□□□ -0.37
SEMA4B-204ENST00000558065 UHRF1BP1Q6BDS2 1440 aa12.73□□□□□ -0.37
SEMA4B-204ENST00000558065 ZEB2O60315 1214 aa12.73□□□□□ -0.37
SEMA4B-204ENST00000558065 MCM2P49736 904 aa12.73□□□□□ -0.37
SEMA4B-204ENST00000558065 IQCB1Q15051 598 aa12.73□□□□□ -0.37
SEMA4B-204ENST00000558065 DNAI1Q9UI46 699 aa12.73□□□□□ -0.37
SEMA4B-204ENST00000558065 CDC25BP30305 580 aa12.73□□□□□ -0.37
SEMA4B-204ENST00000558065 CDC37Q16543 378 aaPredicted RBP12.73□□□□□ -0.37
SEMA4B-204ENST00000558065 ARL10Q8N8L6 244 aa12.73□□□□□ -0.37
SEMA4B-204ENST00000558065 TCP11Q8WWU5 503 aa12.73□□□□□ -0.37
SEMA4B-204ENST00000558065 SYTL4Q96C24 671 aaPredicted RBP12.73□□□□□ -0.37
SEMA4B-204ENST00000558065 ABCA10Q8WWZ4 1543 aa12.72□□□□□ -0.37
SEMA4B-204ENST00000558065 NEMFO60524 1076 aa12.72□□□□□ -0.37
SEMA4B-204ENST00000558065 INPP5BP32019 993 aa12.72□□□□□ -0.37
SEMA4B-204ENST00000558065 LNPKQ9C0E8 428 aa12.72□□□□□ -0.37
SEMA4B-204ENST00000558065 CAPN7Q9Y6W3 813 aa12.72□□□□□ -0.37
SEMA4B-204ENST00000558065 FANCGO15287 622 aa12.72□□□□□ -0.37
SEMA4B-204ENST00000558065 EVCP57679 992 aa12.72□□□□□ -0.37
SEMA4B-204ENST00000558065 NAA25Q14CX7 972 aa12.72□□□□□ -0.37
SEMA4B-204ENST00000558065 GPR161Q8N6U8 529 aaKnown RBP12.72□□□□□ -0.37
SEMA4B-204ENST00000558065 TRIM5Q9C035 493 aa12.72□□□□□ -0.37
SEMA4B-204ENST00000558065 IQCGQ9H095 443 aaKnown RBP12.72□□□□□ -0.37
SEMA4B-204ENST00000558065 MSH6P52701 1360 aa12.72□□□□□ -0.37
SEMA4B-204ENST00000558065 ZNF24P17028 368 aa12.72□□□□□ -0.37
SEMA4B-204ENST00000558065 GET4Q7L5D6 327 aaPredicted RBP12.72□□□□□ -0.37
SEMA4B-204ENST00000558065 CCDC146Q8IYE0 955 aa12.72□□□□□ -0.37
SEMA4B-204ENST00000558065 TDRD7Q8NHU6 1098 aaKnown RBP12.72□□□□□ -0.37
SEMA4B-204ENST00000558065 MRFAP1Q9Y605 127 aa12.72□□□□□ -0.37
SEMA4B-204ENST00000558065 UBE2HP62256 183 aa12.71□□□□□ -0.37
SEMA4B-204ENST00000558065 GORABQ5T7V8 394 aa12.71□□□□□ -0.37
SEMA4B-204ENST00000558065 SFMBT2Q5VUG0 894 aa12.71□□□□□ -0.37
SEMA4B-204ENST00000558065 APAF1O14727 1248 aa12.71□□□□□ -0.37
SEMA4B-204ENST00000558065 FSBPO95073 299 aa12.71□□□□□ -0.37
SEMA4B-204ENST00000558065 SLC4A2P04920 1241 aa12.71□□□□□ -0.37
SEMA4B-204ENST00000558065 HNRNPMP52272 730 aaKnown RBP eCLIP12.71□□□□□ -0.37
SEMA4B-204ENST00000558065 NEUROD2Q15784 382 aa12.71□□□□□ -0.37
SEMA4B-204ENST00000558065 E4F1Q66K89 784 aaPredicted RBP12.71□□□□□ -0.37
SEMA4B-204ENST00000558065 PARD6BQ9BYG5 372 aa12.71□□□□□ -0.37
SEMA4B-204ENST00000558065 MMADHCQ9H3L0 296 aaPredicted RBP12.71□□□□□ -0.37
SEMA4B-204ENST00000558065 REREQ9P2R6 1566 aa12.71□□□□□ -0.38
SEMA4B-204ENST00000558065 TOPBP1Q92547 1522 aa12.71□□□□□ -0.38
SEMA4B-204ENST00000558065 ST18O60284 1047 aa12.71□□□□□ -0.38
SEMA4B-204ENST00000558065 FESP07332 822 aa12.71□□□□□ -0.38
SEMA4B-204ENST00000558065 CCDC192P0DO97 292 aa12.71□□□□□ -0.38
SEMA4B-204ENST00000558065 ACTN3Q08043 901 aaPredicted RBP12.71□□□□□ -0.38
SEMA4B-204ENST00000558065 FAM81AQ8TBF8 368 aa12.71□□□□□ -0.38
SEMA4B-204ENST00000558065 PPP1R13BQ96KQ4 1090 aa12.71□□□□□ -0.38
SEMA4B-204ENST00000558065 PCDHGC5Q9Y5F6 944 aa12.71□□□□□ -0.38
SEMA4B-204ENST00000558065 TMEM62Q0P6H9 643 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms